Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA
mRNA sequence
ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA
Coding sequence (CDS)
ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA
Protein sequence
MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFDAFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNQRTGG
Homology
BLAST of Cla97C11G215430 vs. NCBI nr
Match:
XP_038885392.1 (uncharacterized protein LOC120075791 [Benincasa hispida])
HSP 1 Score: 349.0 bits (894), Expect = 2.7e-92
Identity = 185/198 (93.43%), Postives = 191/198 (96.46%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRTHSFSSSSSNSLSSS SSSSRGSYYFPD+SPFS AATPIRSFSGSIPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSS--SSSSRGSYYFPDESPFSTAATPIRSFSGSIPFSWEH 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLRRGS+SPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
Query: 121 AFLECSKEP-TAAAVDSDLWT--GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 180
AFLECSKEP TAAAVD++LW+ G SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY
Sbjct: 121 AFLECSKEPSTAAAVDAELWSGGGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 180
Query: 181 LPRTPRSSFDLLNQRTGG 196
LPRTPRSSFDLLNQR+GG
Sbjct: 181 LPRTPRSSFDLLNQRSGG 196
BLAST of Cla97C11G215430 vs. NCBI nr
Match:
XP_008441227.1 (PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa] >TYK06646.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 181 TPRSSFDLLNQRTGG 196
TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of Cla97C11G215430 vs. NCBI nr
Match:
XP_011649907.1 (uncharacterized protein LOC105434677 [Cucumis sativus])
HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 182/197 (92.39%), Postives = 188/197 (95.43%), Query Frame = 0
Query: 1 MFQSSRRTHSFSS-SSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWE 60
MFQSSRRTHSFSS SSSNSLSSS SSSSRGSYYFPDDSPFSAAATPIRSFSG+IPFSWE
Sbjct: 1 MFQSSRRTHSFSSASSSNSLSSS--SSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWE 60
Query: 61 HLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFF 120
HLPGIPKKQSPARLRRGS+SPLSS LPLPPNS TP SSKRFGFQDWRKSNRQN+QRDPFF
Sbjct: 61 HLPGIPKKQSPARLRRGSASPLSSFLPLPPNSTTPSSSKRFGFQDWRKSNRQNAQRDPFF 120
Query: 121 DAFLECSKEPT-AAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 180
DAFLECSKEPT AAAVD++LW+G SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL
Sbjct: 121 DAFLECSKEPTNAAAVDAELWSGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 180
Query: 181 PRTPRSSFDLLNQRTGG 196
PRT RSSFDLLNQRTGG
Sbjct: 181 PRTERSSFDLLNQRTGG 195
BLAST of Cla97C11G215430 vs. NCBI nr
Match:
KAG7015908.1 (hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 317.4 bits (812), Expect = 8.7e-83
Identity = 165/195 (84.62%), Postives = 180/195 (92.31%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRR+HSFSSSSS+SLSSSS+SSSSRGS YFP++SPFSAAATP+R+FSGSIPFSWEH
Sbjct: 1 MFQSSRRSHSFSSSSSSSLSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPFSWEH 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLRR S+SPL+SLLPLPPNS T PSSKR GFQDWRKSN Q SQRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRDPFFD 120
Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
AF+ECSKEP AA ++LW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIVYLPR
Sbjct: 121 AFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIVYLPR 180
Query: 181 TPRSSFDLLNQRTGG 196
TPRSSFDLLNQRTGG
Sbjct: 181 TPRSSFDLLNQRTGG 192
BLAST of Cla97C11G215430 vs. NCBI nr
Match:
XP_023549797.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])
HSP 1 Score: 311.6 bits (797), Expect = 4.8e-81
Identity = 165/199 (82.91%), Postives = 180/199 (90.45%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSL----SSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPF 60
MFQSSRR+HSFSSSSS+SL SSSS+SSSSRGS YFP++SPFSAAATP+R+FSGSIPF
Sbjct: 1 MFQSSRRSHSFSSSSSSSLSSSSSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPF 60
Query: 61 SWEHLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRD 120
SWEHLPGIPKKQSPARLRR S+SPL+SLLPLPPNS T PSSKR GFQDWRKSN Q SQRD
Sbjct: 61 SWEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRD 120
Query: 121 PFFDAFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIV 180
PFFDAF+ECSKEP AA ++LW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIV
Sbjct: 121 PFFDAFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIV 180
Query: 181 YLPRTPRSSFDLLNQRTGG 196
YLPRTPRSSFDLLNQRTGG
Sbjct: 181 YLPRTPRSSFDLLNQRTGG 196
BLAST of Cla97C11G215430 vs. ExPASy TrEMBL
Match:
A0A5D3C8I6 (Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001240 PE=4 SV=1)
HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 181 TPRSSFDLLNQRTGG 196
TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of Cla97C11G215430 vs. ExPASy TrEMBL
Match:
A0A1S3B2H5 (uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=4 SV=1)
HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1 MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61 LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120
Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
Query: 181 TPRSSFDLLNQRTGG 196
TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195
BLAST of Cla97C11G215430 vs. ExPASy TrEMBL
Match:
A0A6J1GNZ5 (uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC111456137 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74
Identity = 159/200 (79.50%), Postives = 170/200 (85.00%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRT SFSSSS + SSSS+SSSSRGSYYFPDDSP S AATPIRSFSGSIPFSWE+
Sbjct: 1 MFQSSRRTRSFSSSSPS--SSSSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEY 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLR S+SPL+SLLPLPP S T PSSKRFGF DWRKSNRQNSQRDPFFD
Sbjct: 61 LPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDPFFD 120
Query: 121 AFLECSKEPTAAAV-----DSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESI 180
AF+ECSKEP+AA ++LW SNGKA++RSLSDRFGFLN SSCKRTCGVSESI
Sbjct: 121 AFVECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPNSSCKRTCGVSESI 180
Query: 181 VYLPRTPRSSFDLLNQRTGG 196
VY PR RSSFDLLN R GG
Sbjct: 181 VYRPRRGRSSFDLLNHRNGG 197
BLAST of Cla97C11G215430 vs. ExPASy TrEMBL
Match:
A0A6J1JTM6 (uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739 PE=4 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 4.6e-74
Identity = 158/200 (79.00%), Postives = 169/200 (84.50%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRT SFSSSSS SSSS+SSSSRGSYYFPDDSP S AATPIRSFSGSIPFSWE+
Sbjct: 1 MFQSSRRTRSFSSSSS---SSSSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEY 60
Query: 61 LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
LPGIPKKQSPARLR S+SPL+ LLPLPP S PSSKRFGF DWRKSNRQNSQRDPFFD
Sbjct: 61 LPGIPKKQSPARLRLDSASPLTFLLPLPPISTALPSSKRFGFHDWRKSNRQNSQRDPFFD 120
Query: 121 AFLECSKEPTAAAV-----DSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESI 180
AF+ECSKEP+AA ++LW SNGKA++RSLSDRFGFLN YSSCKRTC VSESI
Sbjct: 121 AFVECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPYSSCKRTCSVSESI 180
Query: 181 VYLPRTPRSSFDLLNQRTGG 196
VY PR RSSFDLLN R+GG
Sbjct: 181 VYRPRRGRSSFDLLNHRSGG 196
BLAST of Cla97C11G215430 vs. ExPASy TrEMBL
Match:
A0A6J1DE38 (uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020211 PE=4 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 5.1e-73
Identity = 156/193 (80.83%), Postives = 172/193 (89.12%), Query Frame = 0
Query: 1 MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
MFQSSRRTHSFSSS SS S+SSSSRGSYYFPDDSP S +ATPIRSFSG+IPFSWEH
Sbjct: 1 MFQSSRRTHSFSSS-----SSLSSSSSSRGSYYFPDDSPLS-SATPIRSFSGAIPFSWEH 60
Query: 61 LPGIPKK-QSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFF 120
LPGIPKK QSPARLR+ S+SPL+SLLPLPPNS TPPSSKRFGFQ+WRKSNR NSQRDPFF
Sbjct: 61 LPGIPKKLQSPARLRQDSASPLTSLLPLPPNSTTPPSSKRFGFQEWRKSNRHNSQRDPFF 120
Query: 121 DAFLECSKEPTAAAVDSDLWT---GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIV 180
DAF+ECSK+ +AA ++LW+ G++ GKAI+RSLSDRFGFLNLYSSCKRTCGVSESIV
Sbjct: 121 DAFVECSKDRASAA--AELWSGGGGSNGGKAISRSLSDRFGFLNLYSSCKRTCGVSESIV 180
Query: 181 YLPRTPRSSFDLL 190
LPRTPRSSFDLL
Sbjct: 181 CLPRTPRSSFDLL 185
BLAST of Cla97C11G215430 vs. TAIR 10
Match:
AT1G71970.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )
HSP 1 Score: 104.8 bits (260), Expect = 8.2e-23
Identity = 92/209 (44.02%), Postives = 120/209 (57.42%), Query Frame = 0
Query: 4 SSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPG 63
SSRR S SSS+S SS S+ SSS S FP DSP ++ ATP+R +PFSWE LPG
Sbjct: 25 SSRR----SLSSSSSFSSFSSCSSS--SLVFPGDSPLNSPATPLRLL--GVPFSWEQLPG 84
Query: 64 IPKKQSPARLRRGSSSPLSSLLPLPP--NSITPPSSKRFGFQDWRKSNRQNS----QRDP 123
PK S R ++ + LLPLPP N P + K+ S+++NS +DP
Sbjct: 85 KPKDYSHRLNNRRNNESSNLLLPLPPHRNISFPATGKK---PKPNNSSKKNSFPVTGKDP 144
Query: 124 FFDAFLECSK-EPTAAAVDSDL---------WTGASNG--KAITR-SLSDRFGFLNLYSS 183
F A LECSK E T + D D+ + G S G K +++ S+ DRFG +NLY S
Sbjct: 145 FAAALLECSKDEGTNSDNDDDVDGVEDVDRRFRGNSGGSSKVLSKNSIGDRFGLVNLYGS 204
Query: 184 CKRTCGVSESIVYLPRTPR-SSFDLLNQR 193
C+RTC V+ESIVYLPR + +S+D L R
Sbjct: 205 CRRTCAVTESIVYLPRARKAASYDNLLPR 222
BLAST of Cla97C11G215430 vs. TAIR 10
Match:
AT1G22680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71970.1); Has 44 Blast hits to 44 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 92.4 bits (228), Expect = 4.2e-19
Identity = 81/192 (42.19%), Postives = 109/192 (56.77%), Query Frame = 0
Query: 5 SRRTHSFSSSSSNSLSS-SSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPG 64
+RR++S SS+ ++S+ S SSSS S F +SP ATP+ IPFSWE LPG
Sbjct: 12 TRRSNSVKFSSTVNISTRRSLSSSSSNSLLFSGNSP----ATPLHPL--GIPFSWEKLPG 71
Query: 65 IPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFDAFL 124
PK+ S R + LS+LLPLPP+ + R +K+ + RDPF A +
Sbjct: 72 KPKEFSYHR----KNESLSNLLPLPPHWSNHSPNTR-----CKKNTSPAAMRDPFMAALV 131
Query: 125 ECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPR 184
ECSK A D + TG + K + +S S G LNLYSSC+R C VSESIVYLP++
Sbjct: 132 ECSK---GATTDGE-HTGGESRKVLRKSRS--IGLLNLYSSCRRACEVSESIVYLPKS-I 181
Query: 185 SSFDLLNQRTGG 196
+S+D L+ T G
Sbjct: 192 ASYDHLHLSTRG 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038885392.1 | 2.7e-92 | 93.43 | uncharacterized protein LOC120075791 [Benincasa hispida] | [more] |
XP_008441227.1 | 1.0e-91 | 91.79 | PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 tri... | [more] |
XP_011649907.1 | 3.3e-90 | 92.39 | uncharacterized protein LOC105434677 [Cucumis sativus] | [more] |
KAG7015908.1 | 8.7e-83 | 84.62 | hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023549797.1 | 4.8e-81 | 82.91 | putative protein TPRXL [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C8I6 | 4.9e-92 | 91.79 | Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var... | [more] |
A0A1S3B2H5 | 4.9e-92 | 91.79 | uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=... | [more] |
A0A6J1GNZ5 | 1.6e-74 | 79.50 | uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC1114561... | [more] |
A0A6J1JTM6 | 4.6e-74 | 79.00 | uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739... | [more] |
A0A6J1DE38 | 5.1e-73 | 80.83 | uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71970.1 | 8.2e-23 | 44.02 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G22680.1 | 4.2e-19 | 42.19 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |