Cla97C11G208630 (gene) Watermelon (97103) v2.5

Overview
NameCla97C11G208630
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr11: 2251793 .. 2253275 (+)
RNA-Seq ExpressionCla97C11G208630
SyntenyCla97C11G208630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAGTTCGGCAGGTAAATTATGGGTAAAACGATGTCATCCAGGAGAGGGAGATGCAAGATTAAGGAGGAGGCTTTATCCGATTGTTGACTTCTGCTCTGCTCTCTTTTTAAAGGTTCTGTGTTGAATAATTAGTACTTTATCTAACCAAATTTTGCATATTACGTGAATGTAAAAGCTTGTTTGTGAAGTTTGAAAATGGAGAGTTAATAGAAGTTTTCAATATTCAGTGTCTATTCTAAAAGTGTCTCTAAGATTTCCTTTTCTCCCTTCCTTTTGGAAGATTGAGGTCAGTTTCAAGTTTAATGTCTTATTTTATGGATTGTAAATTTTTCTGAGTGGGCAGCTAAAAATGCCATTTTTGCCCCTTCGTACACAAAGGAAAACAGCAGCAGCAGCAGTAAAACCAAGGACAAGAACCGTACAAAGTTCTACAAATGCTGTCGAATGTGACAATGCAACCTGCCTTGGTCTTGCTCTTGCTCAGGTGAATGCTCTATATCCGCATCATTCACTTGTAAAAAAAATAAAAAATAAAAAACTGTTTTCTTCTAATTAGAAAAAAACGTTCTTCGATTTTTTATTGAAATTATATTCAGTTGGTTTTCTTTTATCATTTTAATCCTTTAACCTTGAAATTCTTATTATTCATGAATTTTTGAAATTCTTATTATTCATGAATTTTCTAAAAAGCAAGTATAATCTTAATTCTTTTGTTTTTTTTCTGGAAAATTATTAAAGGAAATATGATATATGTATGACTAATTTATTTATGGTAGTTGATATCGTAATGTCTAAAATTAAATGGATAGCTATTTGCCAAAGTGAGTATAGTTCAATTGGCATTTGAGATGTGTTAGCAACACCGAGGTGTGGTTCAAATGGGACCCTCACCCCTAATGTACTAAAAAAATAGAGTAAAGTTGTTGGATTTCTAAAACTTTACATTGTTTTCGTTAAATGATTAGCAGAAATGAACTTAAGTACTTTGTCTACGTATCTACTTAGAAATAAATACTTTATTCTGTATAGCTTAAGAACATAGGAGAATTGATGTCCATTTATCGGTGTTTTCTTTTTCATAACCATTCAATTTTTCAAAGTCAAGAATATAAATTAATGTTCTAAAATTTTTAAGGTAACCTTTCTGCCCTCTTTTTAATGTTTTTAAGACTAGCTCTTCGTTAGAACTCACTAACTCACCATTCCTTATTTTATTAAGTTCTCCATTTCTTCTAAATTATTTTATTAAGTTCACCTTTCTGCCCTCTTTAATGTGTCTATTTGAAGCTATGGCAGGTAAGACGAGTATTAAAAGTTCTTTTTTTGGGCCAAGTTCATTAAAATATTCTCTTCTCTTTGCTAAATTCAGGGACTAAGAGTAAAAATACCCAATTTAGTTTTCTATTTTGAAATGAAAACATTAAATGTTCTAAAATTTGAAATGCAAATTTTTTTCCTTAAAGTTAGCCTATCGTAA

mRNA sequence

ATGGTTCGGCAGCTAAAAATGCCATTTTTGCCCCTTCGTACACAAAGGAAAACAGCAGCAGCAGCAGTAAAACCAAGGACAAGAACCGTACAAAGTTCTACAAATGCTGTCGAATGTGACAATGCAACCTGCCTTGGTCTTGCTCTTGCTCAGGGACTAAGAGTAAAAATACCCAATTTAGTTTTCTATTTTGAAATGAAAACATTAAATGTTCTAAAATTTGAAATGCAAATTTTTTTCCTTAAAGTTAGCCTATCGTAA

Coding sequence (CDS)

ATGGTTCGGCAGCTAAAAATGCCATTTTTGCCCCTTCGTACACAAAGGAAAACAGCAGCAGCAGCAGTAAAACCAAGGACAAGAACCGTACAAAGTTCTACAAATGCTGTCGAATGTGACAATGCAACCTGCCTTGGTCTTGCTCTTGCTCAGGGACTAAGAGTAAAAATACCCAATTTAGTTTTCTATTTTGAAATGAAAACATTAAATGTTCTAAAATTTGAAATGCAAATTTTTTTCCTTAAAGTTAGCCTATCGTAA

Protein sequence

MVRQLKMPFLPLRTQRKTAAAAVKPRTRTVQSSTNAVECDNATCLGLALAQGLRVKIPNLVFYFEMKTLNVLKFEMQIFFLKVSLS
Homology
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BLAST of Cla97C11G208630 vs. ExPASy TrEMBL
Match: A0A0A0LKS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000980 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-04
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0 

Query: 2  VRQLKMPFLPLRTQRKTAAAAVKPRTRTVQSSTNAVECDNA------TCLGLALAQGLRV 61
          V+QLK+  L LRTQRKT AAAVKPR    + STNAVECDNA      +C G+   + L  
Sbjct: 12 VQQLKVTNLSLRTQRKTGAAAVKPRAEPNKCSTNAVECDNANLPWSCSCSGMVEWEYLAG 71

Query: 62 KIPNLVFYFEMKTL 70
            P + ++    TL
Sbjct: 72 SSPLISWFINFITL 85

The following BLAST results are available for this feature:
BLAST of Cla97C11G208630 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G208630 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C11G208630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKS26.5e-0447.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000980 PE=4 SV=1[more]
BLAST of Cla97C11G208630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G208630.2Cla97C11G208630.2mRNA