Cla97C10G203610 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G203610
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	DNA-binding protein S1FA
Location	Cla97Chr10: 33234522 .. 33235156 (+)
RNA-Seq Expression	Cla97C10G203610
Synteny	Cla97C10G203610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCTGCAGGAAAATTGTCATCTCAAATCGGGGAATTTCGAGCGACTGGGTTGGAAAATTGTAATTAAACTGCTTTGCAATAACTGCAACCATCGTTAAAGTTTCGAGGATATTTGAAATTATTATTGATTTTGTAGAGAACTAATTCAAGATCGAAAATGGGCTATCTAGGTTTGAGAAATATGATGAAGAGAAGCTATTTTTGTTTATGCCCTAGGGTTAAATCCTGTTATAGGTGAATCTTGATTAGTAATTGAATTCCCTCGTGAGAACCATGAATAATCACAGATCATTTATTAGTCATTACTTATGAAAAATATGAAATGGTGGGTGGTTTTCGTTCCTTGGAAACATCAAATTTGATGTTGTGGTTCATTGTGATGGTTTATTAATTGTTTGTTCTACAAGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

mRNA sequence

ATGAACCCTGCAGGAAAATTGTCATCTCAAATCGGGGAATTTCGAGCGACTGGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Coding sequence (CDS)

ATGAACCCTGCAGGAAAATTGTCATCTCAAATCGGGGAATTTCGAGCGACTGGTGAACAGGGAAATGTGATCAATGATGTTGAAGCAAAAGGATTCAATCCAGCGCTAATAGTACTTCTTCTTGTTGGTGGGTTGCTGCTGATTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAATCTCCCTCCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAAGAGAGAAAGACTGAAGCAAGGAGTGTCTGCACCTGGAGAGTAA

Protein sequence

MNPAGKLSSQIGEFRATGEQGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE

Homology

[Close]

BLAST of Cla97C10G203610 vs. NCBI nr
Match: XP_038905724.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          ERLKQGVSAPGE
Sbjct: 67 ERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. NCBI nr
Match: KAE8651038.1 (hypothetical protein Csa_000825 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 20  QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
           +GNVIND+EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 825 KGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 884

Query: 80  ERLKQGVSAPGE 92
           ERLKQGVSAPGE
Sbjct: 885 ERLKQGVSAPGE 896

[Close]

BLAST of Cla97C10G203610 vs. NCBI nr
Match: XP_004137812.1 (DNA-binding protein S1FA [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVIND+EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          ERLKQGVSAPGE
Sbjct: 67 ERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. NCBI nr
Match: XP_008442666.1 (PREDICTED: DNA-binding protein S1FA-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVINDVEAKGFNPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          ERLKQGVSAPGE
Sbjct: 67 ERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. NCBI nr
Match: XP_022145490.1 (DNA-binding protein S1FA-like [Momordica charantia])

HSP 1 Score: 131.3 bits (329), Expect = 4.1e-27
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 16 ATGEQGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK 75
          ++  +GNVINDVEAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK
Sbjct: 3  SSNAKGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK 62

Query: 76 KMKRERLKQGVSAPGE 92
          KM++ERLKQGVSAPGE
Sbjct: 63 KMRKERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 24 INDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLK 83
          +N+VEAKG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPPKKKKP+SKKKMKRERLK
Sbjct: 3  VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 84 QGVSAPGE 92
          QGV+ PGE
Sbjct: 63 QGVAPPGE 70

[Close]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 28 EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 87
          EAKG NP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 88 APGE 92
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 27 VEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 86
          +E+KG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 87 SAPGE 92
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-20
Identity = 50/74 (67.57%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 18 GEQGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKM 77
          G  G  +  VEAKG NP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+
Sbjct: 5  GSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKL 64

Query: 78 KRERLKQGVSAPGE 92
          KRE+LKQGV  PGE
Sbjct: 65 KREKLKQGVPVPGE 76

[Close]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-20
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 22 NVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRER 81
          NV+ +   KG NP +IVL++V   LL+F VGNYALY+YAQK LPP+KKKPVSKKKMKRE+
Sbjct: 11 NVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREK 70

Query: 82 LKQGVSAPGE 92
          LKQGVSAPGE
Sbjct: 71 LKQGVSAPGE 80

[Close]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL
Match: A0A0A0LAW3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVIND+EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          ERLKQGVSAPGE
Sbjct: 67 ERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL
Match: A0A1S3B680 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.8e-28
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVINDVEAKGFNPALIVLLLVGGLLL FLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDVEAKGFNPALIVLLLVGGLLLTFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          ERLKQGVSAPGE
Sbjct: 67 ERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL
Match: A0A6J1IZV9 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVINDVEAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          +RLKQGVSAPGE
Sbjct: 67 DRLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL
Match: A0A6J1CUM0 (DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 16 ATGEQGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK 75
          ++  +GNVINDVEAKGFNP LIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK
Sbjct: 3  SSNAKGNVINDVEAKGFNPGLIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKK 62

Query: 76 KMKRERLKQGVSAPGE 92
          KM++ERLKQGVSAPGE
Sbjct: 63 KMRKERLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL
Match: A0A6J1F6J1 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 20 QGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 79
          +GNVINDVEAKG NPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR
Sbjct: 7  KGNVINDVEAKGLNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 80 ERLKQGVSAPGE 92
          +RLKQGVSAPGE
Sbjct: 67 DRLKQGVSAPGE 78

[Close]

BLAST of Cla97C10G203610 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.5e-22
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 27 VEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGV 86
          +E+KG NP LIVLL++GGLLL FLVGN+ LY YAQKNLPP+KKKPVSKKKMK+E++KQGV
Sbjct: 9  IESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGV 68

Query: 87 SAPGE 92
            PGE
Sbjct: 69 QVPGE 73

[Close]

BLAST of Cla97C10G203610 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 100.1 bits (248), Expect = 9.5e-22
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 28 EAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKRERLKQGVS 87
          EAKG NP LIVLL+VGG LL+FL+ NY LY+YAQKNLPP+KKKPVSKKK+KRE+LKQGV 
Sbjct: 13 EAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGVP 72

Query: 88 APGE 92
           PGE
Sbjct: 73 VPGE 76

[Close]

BLAST of Cla97C10G203610 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-21
Identity = 50/74 (67.57%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 18 GEQGNVINDVEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKM 77
          G  G  +  VEAKG NP LIVLL++GGLL+ FL+ NY +Y+YAQKNLPP+KKKP+SKKK+
Sbjct: 5  GSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKL 64

Query: 78 KRERLKQGVSAPGE 92
          KRE+LKQGV  PGE
Sbjct: 65 KREKLKQGVPVPGE 76

[Close]

BLAST of Cla97C10G203610 vs. TAIR 10
Match: AT3G53370.2 (S1FA-like DNA-binding protein )

HSP 1 Score: 53.9 bits (128), Expect = 7.8e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0


Query: 59 YAQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE 92
          +A KNLPP+KKKPVSKKK+KRE+LKQGV  PGE
Sbjct: 6  FAGKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 38

The following BLAST results are available for this feature:

BLAST of Cla97C10G203610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905724.1	3.7e-28	98.61	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
KAE8651038.1	4.9e-28	97.22	hypothetical protein Csa_000825 [Cucumis sativus]	[more]
XP_004137812.1	4.9e-28	97.22	DNA-binding protein S1FA [Cucumis sativus]	[more]
XP_008442666.1	1.4e-27	97.22	PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]	[more]
XP_022145490.1	4.1e-27	89.47	DNA-binding protein S1FA-like [Momordica charantia]	[more]

BLAST of Cla97C10G203610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	1.3e-23	80.88	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
P42551	1.3e-20	78.13	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]
Q93VI0	1.3e-20	75.38	DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1	[more]
Q42337	1.7e-20	67.57	DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2	[more]
Q7XLX6	6.6e-20	71.43	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]

BLAST of Cla97C10G203610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAW3	2.4e-28	97.22	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_3G736950 PE=3 SV=1	[more]
A0A1S3B680	6.8e-28	97.22	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103486467 PE=3 SV=1	[more]
A0A6J1IZV9	2.0e-27	95.83	DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111482175 PE=3 S...	[more]
A0A6J1CUM0	2.0e-27	89.47	DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111014929 PE=...	[more]
A0A6J1F6J1	2.0e-27	95.83	DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111441328 PE=3...	[more]

BLAST of Cla97C10G203610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09735.1	9.5e-22	75.38	S1FA-like DNA-binding protein	[more]
AT3G53370.1	9.5e-22	78.13	S1FA-like DNA-binding protein	[more]
AT2G37120.1	1.2e-21	67.57	S1FA-like DNA-binding protein	[more]
AT3G53370.2	7.8e-08	78.79	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 27..91 e-value: 3.7E-39 score: 132.7
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 19..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..91
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 19..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G203610.2	Cla97C10G203610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding