Cla97C10G202470 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G202470
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Retrotransposon protein
Location	Cla97Chr10: 32366093 .. 32367106 (+)
RNA-Seq Expression	Cla97C10G202470
Synteny	Cla97C10G202470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACATCCGGATCACGCGCAAGAGCCACAAAACATATTTGGACGGATAAGGAGGACCGAATCCTCGTGGAGTGTTTGGTCCAATGCGTTCAGTCCGGGCACTGGCGAGTTGATAACGAGACTTTCCGACATGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGGTAAGCCCACATTTGGAGTTAAGGGTCAGGACGTTGAAGAGACAGTACAGCGCGATTGCTAAAATGTTGGGCACAGGATGTAGTGGGATGCGGAGCGCAAATGTATTGACTATCAGGCAGAGATATTTGACGCGTGGGTCAAGGTAATTTTCTTATTTCTTTTATTTATGCCTTTATGTTTTAATATGTCTTAGCCACAACACATTTCACTTTTAATAGAGTCATCCGAGTGCAAAAGAACTGCAACATAAGTCATTTTCGTTCTATGACGACTTGGCCATTGTATTCGGCAAAGATAGAGCCACGGGAAGTCGTGCAACCACCACTGCAGAGGTCGAATCTGAACCTGTTATGGACGAGGAGAACGAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCTACCTTATGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCTGGCGGTAGAAGATCTACAAGTAGCATGCCATCAAAAAGTAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGCGACGTGGTTCGGGAAGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGTGACCAATCGTGAACGAAAACCTGGCAAGGCGTCGTCGCCGAGAACTTTACGCCGAGTTGCAATCAATTCCTAGTCTATCGGTGCAAGATGGTTTGACTGTTGCACACTCATTGCTTGCAGATCCGATGTTGTTAAGCCACTTCATGGACTTCCCACCACAGTGGAAGTACGACTATTGCATGCAAGTTCTTGGGCAACAACGGGATCCAGTCCCATGA

mRNA sequence

ATGGAAACATCCGGATCACGCGCAAGAGCCACAAAACATATTTGGACGGATAAGGAGGACCGAATCCTCGTGGAGTGTTTGGTCCAATGCGTTCAGTCCGGGCACTGGCGAGTTGATAACGAGACTTTCCGACATGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGTGGGATGCGGAGCGCAAATGTATTGACTATCAGGCAGAGATATTTGACGCGTGGGTCAAGAGTCATCCGAGTGCAAAAGAACTGCAACATAAGTCATTTTCGTTCTATGACGACTTGGCCATTGTATTCGGCAAAGATAGAGCCACGGGAAGTCGTGCAACCACCACTGCAGAGGTCGAATCTGAACCTGTTATGGACGAGGAGAACGAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCTACCTTATGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCTGGCGGTAGAAGATCTACAAGTAGCATGCCATCAAAAAGTAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGCGACGTGGTTCGGGAAGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGCGTCGTCGCCGAGAACTTTACGCCGAGTTGCAATCAATTCCTAGTCTATCGGTGCAAGATGGTTTGACTGTTGCACACTCATTGCTTGCAGATCCGATGTTGTTAAGCCACTTCATGGACTTCCCACCACAGTGGAAGTACGACTATTGCATGCAAGTTCTTGGGCAACAACGGGATCCAGTCCCATGA

Coding sequence (CDS)

ATGGAAACATCCGGATCACGCGCAAGAGCCACAAAACATATTTGGACGGATAAGGAGGACCGAATCCTCGTGGAGTGTTTGGTCCAATGCGTTCAGTCCGGGCACTGGCGAGTTGATAACGAGACTTTCCGACATGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGTGGGATGCGGAGCGCAAATGTATTGACTATCAGGCAGAGATATTTGACGCGTGGGTCAAGAGTCATCCGAGTGCAAAAGAACTGCAACATAAGTCATTTTCGTTCTATGACGACTTGGCCATTGTATTCGGCAAAGATAGAGCCACGGGAAGTCGTGCAACCACCACTGCAGAGGTCGAATCTGAACCTGTTATGGACGAGGAGAACGAGGACATCTTGAATAACCAGTCCCCGGACTTTGAGAACTTCTATATTCCTGATCTACCTTATGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCTGGCGGTAGAAGATCTACAAGTAGCATGCCATCAAAAAGTAGGAGGTCCCGAAGTTCCTCGATTGGAGAGTACAGCGACGTGGTTCGGGAAGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGCGTCGTCGCCGAGAACTTTACGCCGAGTTGCAATCAATTCCTAGTCTATCGGTGCAAGATGGTTTGACTGTTGCACACTCATTGCTTGCAGATCCGATGTTGTTAAGCCACTTCATGGACTTCCCACCACAGTGGAAGTACGACTATTGCATGCAAGTTCTTGGGCAACAACGGGATCCAGTCCCATGA

Protein sequence

METSGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCSIQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTAEVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGGRRSTSSMPSKSRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRRRELYAELQSIPSLSVQDGLTVAHSLLADPMLLSHFMDFPPQWKYDYCMQVLGQQRDPVP

Homology

[Close]

BLAST of Cla97C10G202470 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 5.9e-45
Identity = 112/266 (42.11%), Postives = 154/266 (57.89%), Query Frame = 0


Query: 2   ETSGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPG 61
           E + + ++ATKH WT  ED +LVECL+Q V+ G WR DN TF+ G+L     + +   P 
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPA 196

Query: 62  CS-IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATT 121
           CS   W+  +KCI+ +  +FD WVK HP+A+ L +K F ++ DL +VFG+DRATG R  T
Sbjct: 197 CSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKT 256

Query: 122 TAEVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGG--RRSTSSMP 181
             E+ S+   D E +D+  N     E+F IP+   +  P+ ED P+TP      + SS P
Sbjct: 257 PVEMSSQTARDTEEDDMDIN----LEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRP 316

Query: 182 SKSRRSRSSSIGEYSDVVREGFQLLTKSIDGIA--QRRRRE--------LYAELQSIPSL 241
           SK RRS S   G+  D  R   +  +K I  IA  QR + E        LYAELQ+IP +
Sbjct: 317 SKKRRSYS---GDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGM 376

Query: 242 SVQDGLTVAHSLLADPMLLSHFMDFP 255
            V D L VA SLL DP +L  F+D+P
Sbjct: 377 DVDDCLIVAESLLPDPTMLHAFLDYP 395

[Close]

BLAST of Cla97C10G202470 vs. NCBI nr
Match: KAA0063789.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK07334.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 9.5e-35
Identity = 97/269 (36.06%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 4   SGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCS 63
           + + ++ATKH WT  ED  LVECL+Q V+ G WR DNETF+ G+L  ++  M +  P  S
Sbjct: 53  ASTNSKATKHQWTTIEDEALVECLLQLVEEGGWRADNETFKPGYLYTVIAKMMR--PAYS 112

Query: 64  -IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTA 123
              W+ ERKCI+ +  +FD WVK H +A+ L +K+F ++ DL +VFG+DRAT  R  T  
Sbjct: 113 RFGWNEERKCIEAEKSVFDDWVKGHTNARGLLNKAFPYFYDLEVVFGRDRATIGRCKTPV 172

Query: 124 EVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPG--GRRSTSSMPSK 183
           ++ S+   D E +D+  N     E+F IP+   +  P+ ED  +TP      + SS PSK
Sbjct: 173 QMGSQIAKDTEEDDMDIN----LEDFDIPNPHGLKPPSGEDMTSTPTSMAHDAGSSRPSK 232

Query: 184 SRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRRRELYAELQSIPSLSVQDGLTVAHSL 243
            RRS S                L  +   I                            SL
Sbjct: 233 KRRSYSGD--------------LVNTFHAI---------------------------ESL 274

Query: 244 LADPMLLSHFMDFPPQWKYDYCMQVLGQQ 270
           L DP +L  F+D+P +WKY  CM++LG+Q
Sbjct: 293 LPDPTMLHAFLDYPAEWKYRKCMRILGRQ 274

[Close]

BLAST of Cla97C10G202470 vs. NCBI nr
Match: KAA0048280.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 8.8e-33
Identity = 96/275 (34.91%), Postives = 141/275 (51.27%), Query Frame = 0


Query: 6   SRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCSIQ 65
           S +R  KH WT +E+  LVECLV+ V +G WR DN TF  G+L  + RMM  +IP   + 
Sbjct: 3   SSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFLPGYLNQLARMMAFKIP-VVLG 62

Query: 66  WDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTAEVE 125
              ++KCI  + E+FD WVKSHP+AK L +KSF  YD+L+ VFGKDRATG RA + A++ 
Sbjct: 63  GMMKKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIG 122

Query: 126 SEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGGRRSTSSMPSKSRRSR 185
           S      +     +    DF   Y P L        E        RR+ S   S S+R R
Sbjct: 123 SNDPAGYDAFAADDVSDTDFLPMYSPGLNMSPDDLMETRTARVSERRNVS---SGSKRKR 182

Query: 186 SSSIGEYSDVVREGFQLLTKSIDGIAQ----------RRRRELYAELQSIPSLSVQDGLT 245
           S    +  D+VR   +   + +  IA+            R+E+  +L+ IP L++ D   
Sbjct: 183 SGHATDSGDIVRTAMEYGNEQLHRIAEWPILQRQDATETRQEIVRQLEVIPELTLMDRCR 242

Query: 246 VAHSLLADPMLLSHFMDFPPQWKYDYCMQVLGQQR 271
           +   ++ +   +  F++ P   KY YC  +L + R
Sbjct: 243 LMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of Cla97C10G202470 vs. NCBI nr
Match: TYK06362.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-32
Identity = 90/269 (33.46%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 4   SGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCS 63
           + + ++ATKH WT  ED +LV CL+Q V+ G WR DN TF+ G+L     + +   P CS
Sbjct: 254 ASTNSKATKHRWTTIEDEVLVGCLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGPACS 313

Query: 64  -IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTA 123
              W+ ERKCI+ +  +FD WVK HP A+ L +K F ++ DL +VFG+DRATG R     
Sbjct: 314 GFGWNEERKCIEAEKSVFDDWVKGHPKARGLLNKPFPYFYDLEVVFGRDRATGGR----- 373

Query: 124 EVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPG--GRRSTSSMPSK 183
                                    F IP+   +  P+ ED P+TP      + SS PSK
Sbjct: 374 ------------------------YFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSK 433

Query: 184 SRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRRRELYAELQSIPSLSVQDGLTVAHSL 243
            RRS S  +                                          D      SL
Sbjct: 434 KRRSYSGDL-----------------------------------------MDTFRATESL 452

Query: 244 LADPMLLSHFMDFPPQWKYDYCMQVLGQQ 270
           L DP +L  F+D+P +WKY  CM++LG+Q
Sbjct: 494 LLDPTMLHAFLDYPAEWKYRKCMRILGRQ 452

[Close]

BLAST of Cla97C10G202470 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-32
Identity = 102/303 (33.66%), Postives = 146/303 (48.18%), Query Frame = 0


Query: 6   SRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCSIQ 65
           S +RA KH WT +E+   VECLV+ V SG WR DN TF+ G+LA + RMM +++PG +IQ
Sbjct: 3   SLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQ 62

Query: 66  -------------------------------WDAERKCIDYQAEIFDAWVKSHPSAKELQ 125
                                          W+ E +CI  + ++FD+W+KSHP+AK L 
Sbjct: 63  ESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLL 122

Query: 126 HKSFSFYDDLAIVFGKDRATGSRATTTAEVESEPVMDEENEDILNNQSPDFENFYIPDLP 185
           HKSF +YDDL+ VFGKDRATG+R+ T   V S  V +  N+ I    S D       D+P
Sbjct: 123 HKSFPYYDDLSYVFGKDRATGARSETFPNVGSN-VSNMFNDTIPLGDSHD------EDIP 182

Query: 186 YVNSPTSEDTPTTPGGRRS-----TSSMPSKSRRSRSSSIGEYSDVVREGFQLLTKSIDG 245
            + S     +P    G R+       +  S S+R R S   E  +V+R   +   + +  
Sbjct: 183 TMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKA 242

Query: 246 IAQ----------RRRRELYAELQSIPSLSVQDGLTVAHSLLADPMLLSHFMDFPPQWKY 263
           IA             R ++  +LQ IP L  QD   +   L      +  F+  P + K 
Sbjct: 243 IADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKL 298

[Close]

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.9e-45
Identity = 112/266 (42.11%), Postives = 154/266 (57.89%), Query Frame = 0


Query: 2   ETSGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPG 61
           E + + ++ATKH WT  ED +LVECL+Q V+ G WR DN TF+ G+L     + +   P 
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYLKQYTAIAEMMGPA 196

Query: 62  CS-IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATT 121
           CS   W+  +KCI+ +  +FD WVK HP+A+ L +K F ++ DL +VFG+DRATG R  T
Sbjct: 197 CSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKT 256

Query: 122 TAEVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGG--RRSTSSMP 181
             E+ S+   D E +D+  N     E+F IP+   +  P+ ED P+TP      + SS P
Sbjct: 257 PVEMSSQTARDTEEDDMDIN----LEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRP 316

Query: 182 SKSRRSRSSSIGEYSDVVREGFQLLTKSIDGIA--QRRRRE--------LYAELQSIPSL 241
           SK RRS S   G+  D  R   +  +K I  IA  QR + E        LYAELQ+IP +
Sbjct: 317 SKKRRSYS---GDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGM 376

Query: 242 SVQDGLTVAHSLLADPMLLSHFMDFP 255
            V D L VA SLL DP +L  F+D+P
Sbjct: 377 DVDDCLIVAESLLPDPTMLHAFLDYP 395

[Close]

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL
Match: A0A5A7VE44 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00500 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-35
Identity = 97/269 (36.06%), Postives = 139/269 (51.67%), Query Frame = 0


Query: 4   SGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCS 63
           + + ++ATKH WT  ED  LVECL+Q V+ G WR DNETF+ G+L  ++  M +  P  S
Sbjct: 53  ASTNSKATKHQWTTIEDEALVECLLQLVEEGGWRADNETFKPGYLYTVIAKMMR--PAYS 112

Query: 64  -IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTA 123
              W+ ERKCI+ +  +FD WVK H +A+ L +K+F ++ DL +VFG+DRAT  R  T  
Sbjct: 113 RFGWNEERKCIEAEKSVFDDWVKGHTNARGLLNKAFPYFYDLEVVFGRDRATIGRCKTPV 172

Query: 124 EVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPG--GRRSTSSMPSK 183
           ++ S+   D E +D+  N     E+F IP+   +  P+ ED  +TP      + SS PSK
Sbjct: 173 QMGSQIAKDTEEDDMDIN----LEDFDIPNPHGLKPPSGEDMTSTPTSMAHDAGSSRPSK 232

Query: 184 SRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRRRELYAELQSIPSLSVQDGLTVAHSL 243
            RRS S                L  +   I                            SL
Sbjct: 233 KRRSYSGD--------------LVNTFHAI---------------------------ESL 274

Query: 244 LADPMLLSHFMDFPPQWKYDYCMQVLGQQ 270
           L DP +L  F+D+P +WKY  CM++LG+Q
Sbjct: 293 LPDPTMLHAFLDYPAEWKYRKCMRILGRQ 274

[Close]

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL
Match: A0A5A7TYQ6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002060 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.3e-33
Identity = 96/275 (34.91%), Postives = 141/275 (51.27%), Query Frame = 0


Query: 6   SRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCSIQ 65
           S +R  KH WT +E+  LVECLV+ V +G WR DN TF  G+L  + RMM  +IP   + 
Sbjct: 3   SSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFLPGYLNQLARMMAFKIP-VVLG 62

Query: 66  WDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTAEVE 125
              ++KCI  + E+FD WVKSHP+AK L +KSF  YD+L+ VFGKDRATG RA + A++ 
Sbjct: 63  GMMKKKCIIAEKEVFDDWVKSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIG 122

Query: 126 SEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGGRRSTSSMPSKSRRSR 185
           S      +     +    DF   Y P L        E        RR+ S   S S+R R
Sbjct: 123 SNDPAGYDAFAADDVSDTDFLPMYSPGLNMSPDDLMETRTARVSERRNVS---SGSKRKR 182

Query: 186 SSSIGEYSDVVREGFQLLTKSIDGIAQ----------RRRRELYAELQSIPSLSVQDGLT 245
           S    +  D+VR   +   + +  IA+            R+E+  +L+ IP L++ D   
Sbjct: 183 SGHATDSGDIVRTAMEYGNEQLHRIAEWPILQRQDATETRQEIVRQLEVIPELTLMDRCR 242

Query: 246 VAHSLLADPMLLSHFMDFPPQWKYDYCMQVLGQQR 271
           +   ++ +   +  F++ P   KY YC  +L + R
Sbjct: 243 LMRIIMRNVDDMKAFLEVPDNMKYPYCSIILQENR 273

[Close]

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL
Match: A0A5D3C542 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00540 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 7.3e-33
Identity = 90/269 (33.46%), Postives = 124/269 (46.10%), Query Frame = 0


Query: 4   SGSRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCS 63
           + + ++ATKH WT  ED +LV CL+Q V+ G WR DN TF+ G+L     + +   P CS
Sbjct: 254 ASTNSKATKHRWTTIEDEVLVGCLLQLVEEGGWRADNGTFKPGYLKQYTAIAEMMGPACS 313

Query: 64  -IQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTA 123
              W+ ERKCI+ +  +FD WVK HP A+ L +K F ++ DL +VFG+DRATG R     
Sbjct: 314 GFGWNEERKCIEAEKSVFDDWVKGHPKARGLLNKPFPYFYDLEVVFGRDRATGGR----- 373

Query: 124 EVESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPG--GRRSTSSMPSK 183
                                    F IP+   +  P+ ED P+TP      + SS PSK
Sbjct: 374 ------------------------YFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSK 433

Query: 184 SRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRRRELYAELQSIPSLSVQDGLTVAHSL 243
            RRS S  +                                          D      SL
Sbjct: 434 KRRSYSGDL-----------------------------------------MDTFRATESL 452

Query: 244 LADPMLLSHFMDFPPQWKYDYCMQVLGQQ 270
           L DP +L  F+D+P +WKY  CM++LG+Q
Sbjct: 494 LLDPTMLHAFLDYPAEWKYRKCMRILGRQ 452

[Close]

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.5e-33
Identity = 102/307 (33.22%), Postives = 147/307 (47.88%), Query Frame = 0


Query: 6   SRARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETFRHGFLANILRMMQQRIPGCSIQ 65
           S +R  KH WT +E+  LVECLV+ V +G WR DN TFR G+L  + RMM  +IPG +I 
Sbjct: 3   SSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIH 62

Query: 66  ------------------------------WDAERKCIDYQAEIFDAWVKSHPSAKELQH 125
                                         W+ E+KCI  + E+FD W  SHP+AK L +
Sbjct: 63  ASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLN 122

Query: 126 KSFSFYDDLAIVFGKDRATGSRATTTAEVESE--PVMDEENEDILNNQSPDFENFYIPDL 185
           KSF  YD+L+ VFGKDRATG RA + A++ S   P  D E  D +     DF   Y P L
Sbjct: 123 KSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAEAADAM--PDTDFPPMYSPGL 182

Query: 186 PYVNSPTSEDTPTTPGGRRSTSSMPSKSRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQ- 245
                   E        RR+ S   S S+R R     +  D+VR   +   + +  IA+ 
Sbjct: 183 NMSPDDLMETRTARVSERRNVS---SGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEW 242

Query: 246 ---------RRRRELYAELQSIPSLSVQDGLTVAHSLLADPMLLSHFMDFPPQWKYDYCM 271
                    + R+E+   L++IP L++ D   +   L+ +   +  F++ P   KY YC 
Sbjct: 243 PILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCS 302

[Close]

BLAST of Cla97C10G202470 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 53/242 (21.90%), Postives = 104/242 (42.98%), Query Frame = 0


Query: 7   RARATKHIWTDKEDRILVECLVQCVQSGHWRVDNETF---------------------RH 66
           R +   + W+ +E ++LV+ LV+ + + +WR  N T                       +
Sbjct: 9   RKKGDYNPWSPEETKLLVQLLVEGI-NNNWRDSNGTISKLTVETKFMPEINKEFCRSKNY 68

Query: 67  GFLANILRMMQQRIPGC--------SIQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKS 126
               + ++ ++ +   C           WD   K      E++  ++K+HP+ K+L++ +
Sbjct: 69  NHYLSRMKYLKIQYQSCLDLQRFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDT 128

Query: 127 FSFYDDLAIVFGKDRATGSRATTTAEVESEPVMDEENEDILNNQSPDFENFYIPDLPYVN 186
           F F+D+L I+FG+  ATG  A    +  ++ +     E+       DF+N Y  D    +
Sbjct: 129 FEFFDELQIIFGEGVATGKNAIGLCD-STDGLTYRAGENPRKEYVDDFDNVYEYDTTTHH 188

Query: 187 SPTSEDTPTTPGGRRSTSSMP--SKSRRSRSSSIGEYSDVVREGFQLLTKSIDGIAQRRR 218
             +    P    G   +  +P   ++R  RS+S  E S ++     + +K +D I QR  
Sbjct: 189 ESSEHYAPFMSHGTSESPKLPPRKRTRSERSTSQKEESPMM----VVSSKILDIIQQREE 244

[Close]

BLAST of Cla97C10G202470 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 7.0e-04
Identity = 37/124 (29.84%), Postives = 57/124 (45.97%), Query Frame = 0


Query: 66  WDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDDLAIVFGKDRATGSRATTTAEV- 125
           WD E K      E++  ++K+HP+ K +Q +S   ++DL I+FG   ATGS A   ++  
Sbjct: 92  WDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDHFEDLQIIFGDVVATGSFAVGMSDST 151

Query: 126 --------ESEPVMDEENEDILNNQSPDFENFYIPDLPYVNSPTSEDTPTTPGGRRSTSS 181
                   E     +  N+D    +  +F   +     Y  SP + D PTT G  RS   
Sbjct: 152 CPRIYTVGERSQGKETVNQDENIEEVYEFSFQHPSSAEYSTSPFTFD-PTTRG--RSEKL 211

[Close]

BLAST of Cla97C10G202470 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 9.2e-04
Identity = 26/99 (26.26%), Postives = 43/99 (43.43%), Query Frame = 0


Query: 44  RHGFLANILRMMQQRIPGCSIQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDD 103
           R+  L    + M+  +      WD  R  I     ++D+++K HP A+  + KS   Y+D
Sbjct: 226 RYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYND 285

Query: 104 LAIVF------GKDRATGSRATTTAEVESEPVMDEENED 137
           L  +F      G D      A  T+E ++     E+N D
Sbjct: 286 LDTIFACQAEQGTDHRDDGSAAQTSETKAS---QEQNSD 321

[Close]

BLAST of Cla97C10G202470 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 9.2e-04
Identity = 26/99 (26.26%), Postives = 43/99 (43.43%), Query Frame = 0


Query: 44  RHGFLANILRMMQQRIPGCSIQWDAERKCIDYQAEIFDAWVKSHPSAKELQHKSFSFYDD 103
           R+  L    + M+  +      WD  R  I     ++D+++K HP A+  + KS   Y+D
Sbjct: 226 RYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSLPSYND 285

Query: 104 LAIVF------GKDRATGSRATTTAEVESEPVMDEENED 137
           L  +F      G D      A  T+E ++     E+N D
Sbjct: 286 LDTIFACQAEQGTDHRDDGSAAQTSETKAS---QEQNSD 321

The following BLAST results are available for this feature:

BLAST of Cla97C10G202470 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07921.1	5.9e-45	42.11	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
KAA0063789.1	9.5e-35	36.06	retrotransposon protein [Cucumis melo var. makuwa] >TYK07334.1 retrotransposon p...	[more]
KAA0048280.1	8.8e-33	34.91	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK06362.1	1.5e-32	33.46	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008441954.1	2.0e-32	33.66	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]

BLAST of Cla97C10G202470 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C10G202470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7T4	2.9e-45	42.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VE44	4.6e-35	36.06	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TYQ6	4.3e-33	34.91	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C542	7.3e-33	33.46	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UME4	9.5e-33	33.22	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cla97C10G202470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27260.1	5.6e-09	21.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30140.1	7.0e-04	29.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.1	9.2e-04	26.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	9.2e-04	26.26	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..190
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 65..268 coord: 8..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G202470.1	Cla97C10G202470.1	mRNA