Cla97C10G202250 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C10G202250
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	pleiotropic drug resistance protein 2
Location	Cla97Chr10: 32163514 .. 32164079 (+)
RNA-Seq Expression	Cla97C10G202250
Synteny	Cla97C10G202250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTCATCTCTTTCGTTTCTCATCCACCCACAATCGCCAAACCGCAACTACAAACCAACTTCTCTGTCTCGTCTTCCATTTAAGCTGCTCAGACCACCGGAGTTTCACTTTCCCCGGTAAGTTCACGACGGCGAATCTTTGTATGTCGTCGCCGCTTTGGCGATTGGATATTGAATTAATCGTCGGAAACCATCGTTTTCTGATTACATTGCTCCTCTAGGGTTCGTGGTGGATGAAATAGGAATTTTATGGCGACGGGAGTGGAAGTGGACGATTTCATTCGAATGTCGAGAAGCCGACGGAGCCGTGGGAGTTCGGCTTCAGTGGACGAGGAGGAAGAGGTTCTGTGGGCGGCGATTGAGCGGCTTCCGACGTACGATCGGCTACGGAAGGGAATGCTCCGGCAAGTGGCGGAGAATGGCAAAGTTGTTTACGATGAAGTGGACGTGAGGAAGCTGGGATTTGAGGAGAGGAAAGGATTGATGGAAAAAATGGTGAAAGTTGTTGAAGAAGACAATGAGAAATTTCTGAGACGGATCAGAGGCAGAATGGATCGGTAA

mRNA sequence

ATGGATTCTTCATCTCTTTCGTTTCTCATCCACCCACAATCGCCAAACCGCAACTACAAACCAACTTCTCTGTCTCGTCTTCCATTTAAGCTGCTCAGACCACCGGAGTTTCACTTTCCCCGGAATTTTATGGCGACGGGAGTGGAAGTGGACGATTTCATTCGAATGTCGAGAAGCCGACGGAGCCGTGGGAGTTCGGCTTCAGTGGACGAGGAGGAAGAGGTTCTGTGGGCGGCGATTGAGCGGCTTCCGACGTACGATCGGCTACGGAAGGGAATGCTCCGGCAAGTGGCGGAGAATGGCAAAGTTGTTTACGATGAAGTGGACGTGAGGAAGCTGGGATTTGAGGAGAGGAAAGGATTGATGGAAAAAATGGTGAAAGTTGTTGAAGAAGACAATGAGAAATTTCTGAGACGGATCAGAGGCAGAATGGATCGGTAA

Coding sequence (CDS)

ATGGATTCTTCATCTCTTTCGTTTCTCATCCACCCACAATCGCCAAACCGCAACTACAAACCAACTTCTCTGTCTCGTCTTCCATTTAAGCTGCTCAGACCACCGGAGTTTCACTTTCCCCGGAATTTTATGGCGACGGGAGTGGAAGTGGACGATTTCATTCGAATGTCGAGAAGCCGACGGAGCCGTGGGAGTTCGGCTTCAGTGGACGAGGAGGAAGAGGTTCTGTGGGCGGCGATTGAGCGGCTTCCGACGTACGATCGGCTACGGAAGGGAATGCTCCGGCAAGTGGCGGAGAATGGCAAAGTTGTTTACGATGAAGTGGACGTGAGGAAGCTGGGATTTGAGGAGAGGAAAGGATTGATGGAAAAAATGGTGAAAGTTGTTGAAGAAGACAATGAGAAATTTCTGAGACGGATCAGAGGCAGAATGGATCGGTAA

Protein sequence

MDSSSLSFLIHPQSPNRNYKPTSLSRLPFKLLRPPEFHFPRNFMATGVEVDDFIRMSRSRRSRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKVVEEDNEKFLRRIRGRMDR

Homology

[Close]

BLAST of Cla97C10G202250 vs. NCBI nr
Match: XP_004151528.2 (pleiotropic drug resistance protein 2 [Cucumis sativus] >KAE8651083.1 hypothetical protein Csa_001053 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-28
Identity = 66/78 (84.62%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 69  VDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKV 128
           VD+EEE+LWAAIERLPTYDR+RKGMLRQ  ENG+VVYDEVDVR++GFEERKGLME+MVKV
Sbjct: 6   VDDEEELLWAAIERLPTYDRMRKGMLRQAVENGRVVYDEVDVRRMGFEERKGLMERMVKV 65

Query: 129 VEEDNEKFLRRIRGRMDR 147
           VEEDNE+FLR IR RMDR
Sbjct: 66  VEEDNEEFLRWIRDRMDR 83

[Close]

BLAST of Cla97C10G202250 vs. NCBI nr
Match: KAA0043903.1 (ABC transporter G family member 39-like [Cucumis melo var. makuwa] >TYK25234.1 ABC transporter G family member 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 66  SASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKM 125
           +  VD+ EE+L AAIERLPTYDRLRKGMLRQ  ENG VVYDEVDVR+LGFEERKGLME+M
Sbjct: 2   ATGVDDAEELLRAAIERLPTYDRLRKGMLRQAVENGGVVYDEVDVRRLGFEERKGLMERM 61

Query: 126 VKVVEEDNEKFLRRIRGRMDR 147
           VKVVEEDNE FLRRIRGRMDR
Sbjct: 62  VKVVEEDNEDFLRRIRGRMDR 82

[Close]

BLAST of Cla97C10G202250 vs. NCBI nr
Match: XP_008442814.1 (PREDICTED: ABC transporter G family member 39-like [Cucumis melo] >XP_016899744.1 PREDICTED: ABC transporter G family member 39-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 66  SASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKM 125
           +  VD+ EE+L AAIERLPTYDRLRKGMLRQ  ENG VVYDEVDVR+LGFEERKGLME+M
Sbjct: 2   ATGVDDAEELLRAAIERLPTYDRLRKGMLRQAVENGGVVYDEVDVRRLGFEERKGLMERM 61

Query: 126 VKVVEEDNEKFLRRIRGRMDR 147
           VKVVEEDNE FLRRIRGRMDR
Sbjct: 62  VKVVEEDNEDFLRRIRGRMDR 82

[Close]

BLAST of Cla97C10G202250 vs. NCBI nr
Match: XP_022144605.1 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 2-like [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-27
Identity = 69/103 (66.99%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 44  MATGVEVDDFIRMSRSRRSRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKV 103
           MATG+E+DD  +M+ SRR    S  ++EEEE+ WAAIERLPTYDRLRKGML Q  ENG V
Sbjct: 1   MATGLELDDSAQMTSSRR----SGRLEEEEELRWAAIERLPTYDRLRKGMLLQAVENGGV 60

Query: 104 VYDEVDVRKLGFEERKGLMEKMVKVVEEDNEKFLRRIRGRMDR 147
           V+ EVDV KLGF+ERK LME+++KV EED+EKFLRR+R R DR
Sbjct: 61  VHKEVDVTKLGFQERKELMERLLKVAEEDHEKFLRRLRDRTDR 99

[Close]

BLAST of Cla97C10G202250 vs. NCBI nr
Match: XP_031737939.1 (LOW QUALITY PROTEIN: ABC transporter G family member 34 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 3.0e-27
Identity = 65/84 (77.38%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 63  RGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLM 122
           R SSASVDEEEE+ WAAI+RLPTYDR+RKGMLR++ ENG+VVY+EVDVRK+G EERK +M
Sbjct: 11  RRSSASVDEEEELRWAAIQRLPTYDRVRKGMLREMLENGRVVYEEVDVRKMGLEERKRVM 70

Query: 123 EKMVKVVEEDNEKFLRRIRGRMDR 147
           E+ VKVVEEDNEKFLRR+R R+DR
Sbjct: 71  ERAVKVVEEDNEKFLRRMRNRIDR 94

[Close]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot
Match: Q2PCF1 (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-21
Identity = 49/85 (57.65%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 62  SRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGL 121
           +R    + +EE+E+ WAAI+RLPTY+RLRKGM+++V  NG+VV+ EVD+ KLG +++K L
Sbjct: 45  TRWREMAEEEEKELKWAAIDRLPTYNRLRKGMMKEVMSNGRVVHHEVDMTKLGNQDKKVL 104

Query: 122 MEKMVKVVEEDNEKFLRRIRGRMDR 147
           ME ++KVVE+DNE+FLRR+R R DR
Sbjct: 105 MESILKVVEDDNEQFLRRLRNRTDR 129

[Close]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot
Match: Q7PC87 (ABC transporter G family member 34 OS=Arabidopsis thaliana OX=3702 GN=ABCG34 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 70  DEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKVV 129
           +++ E+ WAA+ERLPTYDRLRKGML Q   NGK+  ++VDV  L  +E+K LME ++K V
Sbjct: 54  EDDVELRWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILKFV 113

Query: 130 EEDNEKFLRRIRGRMDR 147
           EEDNEKFLRR+R R DR
Sbjct: 114 EEDNEKFLRRLRERTDR 130

[Close]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot
Match: O24367 (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza OX=29656 GN=TUR2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.4e-17
Identity = 44/82 (53.66%), Postives = 63/82 (76.83%), Query Frame = 0


Query: 65  SSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEK 124
           SS   D+EE + WAA+E+LPTYDRLRKG++    + G++   EVD++ LGF+ERK L+EK
Sbjct: 38  SSREEDDEEALKWAALEKLPTYDRLRKGIM--TGDGGEI--QEVDIQGLGFQERKNLLEK 97

Query: 125 MVKVVEEDNEKFLRRIRGRMDR 147
           +V+  EEDNE+FL ++R RM+R
Sbjct: 98  LVRNAEEDNERFLLKLRNRMER 115

[Close]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot
Match: Q7PC84 (ABC transporter G family member 39 OS=Arabidopsis thaliana OX=3702 GN=ABCG39 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 70  DEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKVV 129
           +++ E+ WAAIERLPT+DRLRKGML Q + NGK+  +++D+ +L  +++K LME ++  V
Sbjct: 56  EDDMELRWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMILSFV 115

Query: 130 EEDNEKFLRRIRGRMDR 147
           EEDNEKFLR +R R DR
Sbjct: 116 EEDNEKFLRDLRERTDR 132

[Close]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot
Match: Q5Z9S8 (ABC transporter G family member 42 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 57  SRSRRSRGSSASVDEEEEVL-WAAIERLPTYDRLRKGMLRQVAEN--------GKVVYDE 116
           SR RR  G   + D++EE L WAAIERLPTY R+R  +L    E         GK  Y E
Sbjct: 41  SRGRRRSGRGGTADDDEEALRWAAIERLPTYSRMRTAILSSAEEEAAAAAAGAGKQQYKE 100

Query: 117 VDVRKLGFEERKGLMEKMVKVVEEDNEKFLRRIRGRMDR 147
           VDVR+LG  ER+  +E++ +V EEDN++FL+++R R+DR
Sbjct: 101 VDVRRLGVGERQEFIERVFRVAEEDNQRFLQKLRNRIDR 139

[Close]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL
Match: A0A0A0LGJ3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G752490 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.6e-29
Identity = 83/148 (56.08%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 1   MDSSSLSFLIHPQSPNRNYKPTSLSRLPFKLLRPPE-FHFP-RNFMATGVEVDDFIRMSR 60
           M+SSS S  +H           S S+LP  ++ P + FH P   FMA+  E         
Sbjct: 14  MNSSSSSLQLH-----------SPSQLP--IIFPSKCFHSPGTEFMASATE--------- 73

Query: 61  SRRSRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEER 120
               R SSASVDEEEE+ WAAI+RLPTYDR+RKGMLR++ ENG+VVY+EVDVRK+G EER
Sbjct: 74  EAEDRRSSASVDEEEELRWAAIQRLPTYDRVRKGMLREMLENGRVVYEEVDVRKMGLEER 133

Query: 121 KGLMEKMVKVVEEDNEKFLRRIRGRMDR 147
           K +ME+ VKVVEEDNEKFLRR+R R+DR
Sbjct: 134 KRVMERAVKVVEEDNEKFLRRMRNRIDR 139

[Close]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL
Match: A0A0A0LEI8 (ABC_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G774710 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.9e-29
Identity = 66/78 (84.62%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 69  VDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKV 128
           VD+EEE+LWAAIERLPTYDR+RKGMLRQ  ENG+VVYDEVDVR++GFEERKGLME+MVKV
Sbjct: 6   VDDEEELLWAAIERLPTYDRMRKGMLRQAVENGRVVYDEVDVRRMGFEERKGLMERMVKV 65

Query: 129 VEEDNEKFLRRIRGRMDR 147
           VEEDNE+FLR IR RMDR
Sbjct: 66  VEEDNEEFLRWIRDRMDR 83

[Close]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL
Match: A0A1S4DUT5 (ABC transporter G family member 39-like OS=Cucumis melo OX=3656 GN=LOC103486588 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 66  SASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKM 125
           +  VD+ EE+L AAIERLPTYDRLRKGMLRQ  ENG VVYDEVDVR+LGFEERKGLME+M
Sbjct: 2   ATGVDDAEELLRAAIERLPTYDRLRKGMLRQAVENGGVVYDEVDVRRLGFEERKGLMERM 61

Query: 126 VKVVEEDNEKFLRRIRGRMDR 147
           VKVVEEDNE FLRRIRGRMDR
Sbjct: 62  VKVVEEDNEDFLRRIRGRMDR 82

[Close]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL
Match: A0A5D3DNR9 (ABC transporter G family member 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003640 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 66  SASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKM 125
           +  VD+ EE+L AAIERLPTYDRLRKGMLRQ  ENG VVYDEVDVR+LGFEERKGLME+M
Sbjct: 2   ATGVDDAEELLRAAIERLPTYDRLRKGMLRQAVENGGVVYDEVDVRRLGFEERKGLMERM 61

Query: 126 VKVVEEDNEKFLRRIRGRMDR 147
           VKVVEEDNE FLRRIRGRMDR
Sbjct: 62  VKVVEEDNEDFLRRIRGRMDR 82

[Close]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL
Match: A0A6J1CS43 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 2-like OS=Momordica charantia OX=3673 GN=LOC111014246 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 8.4e-28
Identity = 69/103 (66.99%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 44  MATGVEVDDFIRMSRSRRSRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKV 103
           MATG+E+DD  +M+ SRR    S  ++EEEE+ WAAIERLPTYDRLRKGML Q  ENG V
Sbjct: 1   MATGLELDDSAQMTSSRR----SGRLEEEEELRWAAIERLPTYDRLRKGMLLQAVENGGV 60

Query: 104 VYDEVDVRKLGFEERKGLMEKMVKVVEEDNEKFLRRIRGRMDR 147
           V+ EVDV KLGF+ERK LME+++KV EED+EKFLRR+R R DR
Sbjct: 61  VHKEVDVTKLGFQERKELMERLLKVAEEDHEKFLRRLRDRTDR 99

[Close]

BLAST of Cla97C10G202250 vs. TAIR 10
Match: AT2G36380.1 (pleiotropic drug resistance 6 )

HSP 1 Score: 94.4 bits (233), Expect = 8.3e-20
Identity = 47/77 (61.04%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 70  DEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKVV 129
           +++ E+ WAA+ERLPTYDRLRKGML Q   NGK+  ++VDV  L  +E+K LME ++K V
Sbjct: 54  EDDVELRWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILKFV 113

Query: 130 EEDNEKFLRRIRGRMDR 147
           EEDNEKFLRR+R R DR
Sbjct: 114 EEDNEKFLRRLRERTDR 130

[Close]

BLAST of Cla97C10G202250 vs. TAIR 10
Match: AT1G66950.1 (pleiotropic drug resistance 11 )

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-18
Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 70  DEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEKMVKVV 129
           +++ E+ WAAIERLPT+DRLRKGML Q + NGK+  +++D+ +L  +++K LME ++  V
Sbjct: 56  EDDMELRWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMILSFV 115

Query: 130 EEDNEKFLRRIRGRMDR 147
           EEDNEKFLR +R R DR
Sbjct: 116 EEDNEKFLRDLRERTDR 132

[Close]

BLAST of Cla97C10G202250 vs. TAIR 10
Match: AT1G15520.1 (pleiotropic drug resistance 12 )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 65  SSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAENGKVVYDEVDVRKLGFEERKGLMEK 124
           SS   D+EE + WAA+E+LPT+DRLRKG+L      G +  +E+D++KLGF++ K L+E+
Sbjct: 32  SSREEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPI--NEIDIQKLGFQDTKKLLER 91

Query: 125 MVKVVEEDNEKFLRRIRGRMDR 147
           ++KV ++++EK L +++ R+DR
Sbjct: 92  LIKVGDDEHEKLLWKLKKRIDR 111

[Close]

BLAST of Cla97C10G202250 vs. TAIR 10
Match: AT1G15210.1 (pleiotropic drug resistance 7 )

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 40  PRNFMATGVEVDDFIRMSRSRRSRG----------SSASVDEEEEVL-WAAIERLPTYDR 99
           P + M+ G  +   I  S S+ SR            + SV+E+EE L WA+IE+LPTY+R
Sbjct: 5   PAHAMSRGGSMRQTISRSVSKASRNMEDIFNTSSRRTKSVNEDEEALKWASIEKLPTYNR 64

Query: 100 LRKGMLRQVAEN----GKVVYDEVDVRKLGFEERKGLMEKMVKVVEEDNEKFLRRIRGRM 147
           LR  ++ ++ E+     +++   VDV KL  EER+  ++ + KV E+DNE+ L ++R R+
Sbjct: 65  LRTSLMPELGEDDVYGNQILNKAVDVTKLDGEERQKFIDMVFKVAEQDNERILTKLRNRI 124

[Close]

BLAST of Cla97C10G202250 vs. TAIR 10
Match: AT1G59870.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.8e-13
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 59  SRRSRGSSASVDEEEEVLWAAIERLPTYDRLRKGMLRQVAEN----GKVVYDEVDVRKLG 118
           S  SR + +  D+EE + WAAIE+LPTY RLR  ++  V E+     +++  EVDV KL 
Sbjct: 37  SSGSRRTQSVNDDEEALKWAAIEKLPTYSRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLD 96

Query: 119 FEERKGLMEKMVKVVEEDNEKFLRRIRGRMDR 147
            E+R+  ++ + KV E+DNE+ L ++R R+DR
Sbjct: 97  GEDRQKFIDMVFKVAEQDNERILTKLRNRIDR 128

The following BLAST results are available for this feature:

BLAST of Cla97C10G202250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151528.2	2.0e-28	84.62	pleiotropic drug resistance protein 2 [Cucumis sativus] >KAE8651083.1 hypothetic...	[more]
KAA0043903.1	1.0e-27	83.95	ABC transporter G family member 39-like [Cucumis melo var. makuwa] >TYK25234.1 A...	[more]
XP_008442814.1	1.0e-27	83.95	PREDICTED: ABC transporter G family member 39-like [Cucumis melo] >XP_016899744....	[more]
XP_022144605.1	1.7e-27	66.99	LOW QUALITY PROTEIN: pleiotropic drug resistance protein 2-like [Momordica chara...	[more]
XP_031737939.1	3.0e-27	77.38	LOW QUALITY PROTEIN: ABC transporter G family member 34 [Cucumis sativus]	[more]

BLAST of Cla97C10G202250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2PCF1	1.9e-21	57.65	Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PD...	[more]
Q7PC87	1.2e-18	61.04	ABC transporter G family member 34 OS=Arabidopsis thaliana OX=3702 GN=ABCG34 PE=...	[more]
O24367	6.4e-17	53.66	Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza OX=29656 GN=TUR2...	[more]
Q7PC84	1.1e-16	54.55	ABC transporter G family member 39 OS=Arabidopsis thaliana OX=3702 GN=ABCG39 PE=...	[more]
Q5Z9S8	1.9e-16	47.47	ABC transporter G family member 42 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]

BLAST of Cla97C10G202250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGJ3	7.6e-29	56.08	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G75...	[more]
A0A0A0LEI8	9.9e-29	84.62	ABC_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G774710...	[more]
A0A1S4DUT5	4.9e-28	83.95	ABC transporter G family member 39-like OS=Cucumis melo OX=3656 GN=LOC103486588 ...	[more]
A0A5D3DNR9	4.9e-28	83.95	ABC transporter G family member 39-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1CS43	8.4e-28	66.99	LOW QUALITY PROTEIN: pleiotropic drug resistance protein 2-like OS=Momordica cha...	[more]

BLAST of Cla97C10G202250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36380.1	8.3e-20	61.04	pleiotropic drug resistance 6	[more]
AT1G66950.1	7.8e-18	54.55	pleiotropic drug resistance 11	[more]
AT1G15520.1	3.6e-15	45.12	pleiotropic drug resistance 12	[more]
AT1G15210.1	4.4e-13	36.89	pleiotropic drug resistance 7	[more]
AT1G59870.1	5.8e-13	42.39	ABC-2 and Plant PDR ABC-type transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 52..145
None	No IPR available	PANTHER	PTHR19241:SF637	CASSETTE TRANSPORTER, PUTATIVE-RELATED	coord: 52..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G202250.2	Cla97C10G202250.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding