Cla97C10G191660 (gene) Watermelon (97103) v2.5

Overview
NameCla97C10G191660
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionATP-dependent Clp protease proteolytic subunit
LocationCla97Chr10: 14065322 .. 14069500 (+)
RNA-Seq ExpressionCla97C10G191660
SyntenyCla97C10G191660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATTGCAAAAGCAACTCTTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTAGGAAAGCCAAGAAGAATTGGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCGAGGTGGTCAAGGAAGTGACGAGGAGCGCGGTAGCCAGTAAGAAACAGAAGAACCAAGTCCCTGTATGACACTGGACTCACCTCCTTCCTCTTCATCTTCCTATGTAAGATCTTAAAGGTGATTATTACCAATGAATTAAACAAGTATAGGTTTTGGAAAATTCAAGAGTCCAAACATTCCCCTTCTCTCCCCTTGTCTAGATGCTCAAATATTGCTACAGTCAATATCCAATCTGTCTCCAAAGCTTTGCTCAATCTGCAATCTTATGATTCTTAGTAAGTTACTGCAACTTGAATGGAAGTTTCTTTCAGTTTTGTAGGTCTCTCTTTGGTAGGCTGAGTTTTGGATAATGTTTGAATCCAAAGTAATCATGCAATGCATTGCTAAACACGAAGTTGTTCTTGCCTCTCGTGCGAGGTTCAAAATGTTGACCTTGAACGTCTTAATTTTACGAAAATTTCGATAAAATGGATATTTTTAAAAAAAATTATAAAAACAAAAAATTCAAAAAAAAATTTAACTAATAAGTAAAAATTTAATAATTTTTCAAATTAAGAAGATTTATTATTTATATTATATTTACATCAGTGACATTTTGTTGCTTATTTTTTATGTTTCATAGATTTTTCTATAATATAATAAAAGTATCGATTTACCCCTAATTTTGATGTCAAACCCATAGAAACGTGAAAATATCAATATAAATATCAACATGTCCAAGAAAATTTAATACTATACTCTTGTTTGGAAAATTAGGATGTAGTATAGTCTATATTTTAGTTTCTTCAAATTTGATTATATATATATATACAAAATTCTCTAAATTCAAGTTTCAAAGATAATAGTCTATATTTTATTTCAGTTGAAATATGATCAATTTAATGTGTCTTACCATTTTAAATTGGATCTTAGACCTAGTCAAAAGTATTATTCTTAAAAGTTGTATATGTAATATCATGAAATATGAATGGTTATGTATTCTTAAAAGTTCACATATGAAATTGAAAGATTAGATTATGGCTAAATAATTATTTGGTTTTTGATTTTTTTATTTTAGTTTTTCTTTTAAAACATATACATTTAGTTATCATTTTTTCCTTTTTTAAAAACAAAAAACAAAAAATATGGTTGAAAATTGTGTGTCATTTTTTAAAAGGTAAAATAAAATAAGTTTTGAGAGTGAATGAAGCGTATTTGTTATAAATATGATGATACTTTAAAACTTTAGCAATAACTTTTTAAAATTTGCAAATATAGCAAAAAAAACAGTGAAGTAGATTTCTGTTTTTTTATTATTCCAAATTTAACCTTATTGGTGTATCAGTACTATATTTGATATACTTTATATTTAGTGAAATGGGGGTTATTTCTAAATTTGAATTTCATGATATTAATTAATATAATTAAATTCAAATTATGTATTATATCCCATATAATATATAACCTATAGTTTATATATGAATCACATTCATATAATTAATATTTGAATCACATTCAAATATTGCATTAAAAAAAAAAAGAACACATTCAAATATTTATTTCTCTAAAAAAAACTTTATATTATAATGTATCACATACATTATATTAATTGTATCTAATACAATTAAATCCCTTTAATTAATTTGGACAATTCAAATTAATTCAAAATTAATTTGATTCTCATTATTCCTTATTGAGCTAACAAGAGAACCTTATGGACCTATAGATTGAAACTTCAATGATGCGAGATTATTTAATTAAACTCTTTAATTAAATTAATCTCCATTCATTAACTACCGATCACTCCACTACCGACAATTGCACTCTTCACACTATAAATGTATTTCTATGTTCATTGGATATAACCAATCAACAATGCGTTGACCCTTCACAAATTGCTCGTAAGTACAATTAAGTCAAAATTACTGTTTTACCCATGTAGTTACATTTAACTCCTTAAGTACCATAGTTATAGTCCATCGGGCCACGAGATGGTGTGGCGCCACATTGTTCAAGTCCCGGAATCAACCCATAAGGGAGAAATTTCTCTACTTTCTCTAATAGTAGGGAAGAAGTGAATTCCTTTATGTGTAGCTGTGTACCCAGCTCCCAAATTAAATGAATCCCCAAAATGGTAGGCATATTGAGTAGGCAAACTGGCTACTCTTACCCATGCAAATCAAAGGACCACCCTCATAGGCAGTAGTTCACAACTCACTAAAGATTCAGGTCAAGTCACCTATGGGTCATCCTGATGAAATGTGAGTCTCTTCTAGTAACGGTGTTATAAAGAGAGAGTTAACATTTCGTGGTCCGGTCCTATACAAACTCTTTATATAGAATACCTCGTTCACATGTCTCCACTTGTAACAACTACAAAGCGAGTCATATTCGTAGTGCCACCAGGATAAGGTACCTAGCCTTATCCATCTACATATATTTAGGTTATTACTTAAACATGATCCACTTGTATATCTCCATATACATGTTTAAGTTACAAGTAATAACCTTGGATCTTAGTTTATTGGTTTTGGTTTTGGGTTAATGCAACTAAATGTCGAATAAAATAACATTTATTTTATTAAAACTTACAAACTACAAGAACCACGAGATTTAGGACATCAACCCCAACATCAACAATATCATGGACATGTTTTTTTCTATCTAAATTATGCATATCAATCAATTAATATTCGAAATATGAAATATTTGTTATATAATTTGATATACCAAATTCAGTATGACCTATATACCACTAAAATTATATAAAAAATTTGAAAATAAAACAAATTAACTAGTATAATTTATATTTGATATTATCAAATTTGAGATTAACTAATATAATTTATATTTAGTATATCATGTAACAAAACTAACAGATTTAACATATACCATCAATATCAAAATTGAACTAATAGAATGCAAATAAGTCTATATTAATTTTTTTTTACCATAATTGAACAACACAGATTTAATTAAAATCTTAATTATGTTTGGAACAGTCCAGAACATAGGACCAAGACATAACTTTTACTTGTTCAAATAACAATTAAGGTGAAGCAGGGTCAAGAACAACGAATCTCTTGCTTGTCTCTAGTAGCCGATCGAGTTTCTTTGTCCCTCTCCTGCTTATTGATTAGGGCGAGTCACTCAAGTCCAAAACAATTTCATTTTACCAAATTCAATGTTAGTCAAATTAGTCAACATTTCTATGTTTTGATGCAACGACAAGATGTTATTTGTAACAAGTAGAAAGTCAATCATAACACAATTAAAGTCATGACATACCAGTTGTATAAATGATATTCTTTAAATAAAATATATTGATCGATTAATACACCAAATATGAAGTAGTTGACTAATATACTAAAATATGAAATATATTAGATATACCTACTAATGCACAAATAAAAATAAAATCGTAATAATATAAAAATTGGAAATTAGATTTAATTTTTTTTTTATATTTGCAATTTCAAAAAATCATGATTATGTTTGGAAATATTGTTTTTTTCTAGCCATTGGAATTTCACTTAAATAAGATCAGGATTAATTACCATATCCGATTATTAATTTTAAAAAACAATTAAACTGGAAAAAAGAATATACACAAAAAAACATTATAGTCAAACAGTCCTAAATGGAAAAAAAATGGTCAAATTAAAGAAGTGCGAAAATATCGGAGCTTGACGACGTTGTAATATTTCCCCAATCCGATTGGCTTTAAAAGGCGGTAATCGATGTTTTTTTGGGCGCCAAGTAAATAACGATCGTATTCATTCATCATCTCTCTATTTTTCGTTGGAAATTTTTGTTTCGATTCCAGAAATTTTGTGCAATGGGAAGAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA

mRNA sequence

ATGCCAATTGCAAAAGCAACTCTTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTAGGAAAGCCAAGAAGAATTGGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCGAGGTGGTCAAGGAAGTGACGAGGAGCGCGGTAGCCAAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA

Coding sequence (CDS)

ATGCCAATTGCAAAAGCAACTCTTCCACCGAAAACCCGAGTCTGGGATCTATGGAAGGTTGAAGGGAGTAGGAAAGCCAAGAAGAATTGGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCGAGGTGGTCAAGGAAGTGACGAGGAGCGCGGTAGCCAAGGAAAATTGAGTCTGAATCTGATTCCAAATCGGAAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCTACCCTTTGCGATGTTCGGACTTGCGTTCTCATCCATGGCCCTGCTTCTTCGTCGACTGAAGATCCTTCTACCCAATCGGAGCTGGAATTCACTCTTGGCCTTCCAATCGCACCGACCTCGAAGCTATGA

Protein sequence

MPIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSELEFTLGLPIAPTSKL
Homology
[Close]
BLAST of Cla97C10G191660 vs. NCBI nr
Match: XP_038887059.1 (agamous-like MADS-box protein AGL82, partial [Benincasa hispida])

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-21
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 54  QGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQS 113
           +GKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDV+TCVL+HGPAS  TEDPS QS
Sbjct: 3   RGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVQTCVLVHGPASLPTEDPS-QS 62

Query: 114 ELEF 118
           +LEF
Sbjct: 63  DLEF 65

[Close]
BLAST of Cla97C10G191660 vs. NCBI nr
Match: XP_038887053.1 (agamous-like MADS-box protein AGL82, partial [Benincasa hispida])

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 54  QGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQS 113
           +GKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDV+TCVL+HGPAS  TEDPS QS
Sbjct: 3   RGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVQTCVLVHGPASLPTEDPS-QS 62

Query: 114 ELEF 118
           + EF
Sbjct: 63  DPEF 65

[Close]
BLAST of Cla97C10G191660 vs. NCBI nr
Match: XP_008457103.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-17
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA+AT PPKTRVWDLWKVEGSRKAKKN PSE+KIL+NGY+GG+GSDEERGSQ
Sbjct: 278 PIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQ 330

[Close]
BLAST of Cla97C10G191660 vs. NCBI nr
Match: KAA0060718.1 (ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK01461.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-17
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA+AT PPKTRVWDLWKVEGSRKAKKN PSE+KIL+NGY+GG+GSDEERGSQ
Sbjct: 314 PIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQ 366

[Close]
BLAST of Cla97C10G191660 vs. NCBI nr
Match: XP_022143418.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia])

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA A  PPKTRVWDLWKVEGSRKAKKN PSE+KILQNGY+GGQG+DEERG+Q
Sbjct: 275 PIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKILQNGYQGGQGNDEERGTQ 327

[Close]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match: Q9SXJ6 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGY 42
           PI   T PPKT+VWDLWKVEG++K   N PSE  + QNGY
Sbjct: 266 PIGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match: Q9FIM0 (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 57  LSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSS 106
           + L  I N K+RI+T+KKRK SL KKA E STLC V TC++++GP  ++
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKAT 54

[Close]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match: Q9C6V4 (Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 56  KLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSEL 115
           K  L LIP+R  R +TF+KR   + KK +EL+TLCD++ C +I+ P  + T  PST+   
Sbjct: 4   KTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPTVWPSTEGVQ 63

Query: 116 E 117
           E
Sbjct: 64  E 64

[Close]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 9.1e-07
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 56  KLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGP 102
           K+ L+LI N +SR ++F KRKN + KK +ELSTLC V+ C LI+ P
Sbjct: 3   KVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSP 48

[Close]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0 

Query: 56  KLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTE 108
           K+ L  I N  SR +TFKKRK  LMKK +ELSTLC +  C +I+ P  ++ E
Sbjct: 5   KVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPE 56

[Close]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match: A0A5A7UZN2 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00040 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA+AT PPKTRVWDLWKVEGSRKAKKN PSE+KIL+NGY+GG+GSDEERGSQ
Sbjct: 314 PIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQ 366

[Close]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match: A0A1S3C615 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103496858 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA+AT PPKTRVWDLWKVEGSRKAKKN PSE+KIL+NGY+GG+GSDEERGSQ
Sbjct: 278 PIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQ 330

[Close]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match: A0A6J1CQN6 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111013299 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.7e-17
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGYRGGQGSDEERGSQ 55
           PIA A  PPKTRVWDLWKVEGSRKAKKN PSE+KILQNGY+GGQG+DEERG+Q
Sbjct: 275 PIADAAAPPKTRVWDLWKVEGSRKAKKNLPSEDKILQNGYQGGQGNDEERGTQ 327

[Close]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match: A0A6J1J5U6 (agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 54  QGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQS 113
           +GKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS  S
Sbjct: 3   RGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSS 62

[Close]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match: A0A6J1F4C8 (agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC111442271 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0 

Query: 54  QGKLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQS 113
           +GKLS NLI NRKSR STFK+RKNSLMKKAYELSTLCDVRTCVLI+GP  +  EDPS  S
Sbjct: 3   RGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSS 62

[Close]
BLAST of Cla97C10G191660 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-09
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 2   PIAKATLPPKTRVWDLWKVEGSRKAKKNWPSENKILQNGY 42
           PI   T PPKT+VWDLWKVEG++K   N PSE  + QNGY
Sbjct: 266 PIGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]
BLAST of Cla97C10G191660 vs. TAIR 10
Match: AT5G26580.1 (AGAMOUS-like-34 )

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 56  KLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGP 102
           K+ L+LI N  SR ++F KRKN +MKK YELSTLC V+ C LI+ P
Sbjct: 5   KVKLSLIANEISRETSFMKRKNGIMKKLYELSTLCGVQACTLIYSP 50

[Close]
BLAST of Cla97C10G191660 vs. TAIR 10
Match: AT5G58890.1 (AGAMOUS-like 82 )

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0 

Query: 57  LSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSS 106
           + L  I N K+RI+T+KKRK SL KKA E STLC V TC++++GP  ++
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKAT 54

[Close]
BLAST of Cla97C10G191660 vs. TAIR 10
Match: AT5G55690.1 (MADS-box transcription factor family protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-08
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0 

Query: 57  LSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTE 108
           + +  I N K+RI+T+KKRK  L KKA E STLC V TCV+++GP+ +  E
Sbjct: 6   VKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDE 56

[Close]
BLAST of Cla97C10G191660 vs. TAIR 10
Match: AT1G31640.1 (AGAMOUS-like 92 )

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0 

Query: 56  KLSLNLIPNRKSRISTFKKRKNSLMKKAYELSTLCDVRTCVLIHGPASSSTEDPSTQSEL 115
           K  L LIP+R  R +TF+KR   + KK +EL+TLCD++ C +I+ P  + T  PST+   
Sbjct: 4   KTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPTVWPSTEGVQ 63

Query: 116 E 117
           E
Sbjct: 64  E 64

The following BLAST results are available for this feature:
BLAST of Cla97C10G191660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887059.16.2e-2189.06agamous-like MADS-box protein AGL82, partial [Benincasa hispida][more]
XP_038887053.14.0e-2087.50agamous-like MADS-box protein AGL82, partial [Benincasa hispida][more]
XP_008457103.15.5e-1786.79PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu... [more]
KAA0060718.15.5e-1786.79ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK... [more]
XP_022143418.11.6e-1684.91ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica chara... [more]
BLAST of Cla97C10G191660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SXJ64.8e-0862.50ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t... [more]
Q9FIM02.4e-0753.06Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=... [more]
Q9C6V47.0e-0744.26Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana OX=3702 GN=AGL92 PE=... [more]
Q7XJK59.1e-0754.35Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=... [more]
Q9FJK31.5e-0650.00Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=... [more]
BLAST of Cla97C10G191660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UZN22.6e-1786.79ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3C6152.6e-1786.79ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A6J1CQN67.7e-1784.91ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN... [more]
A0A6J1J5U61.5e-1578.33agamous-like MADS-box protein AGL14 OS=Cucurbita maxima OX=3661 GN=LOC111482037 ... [more]
A0A6J1F4C81.5e-1578.33agamous-like MADS-box protein AGL14 OS=Cucurbita moschata OX=3662 GN=LOC11144227... [more]
BLAST of Cla97C10G191660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G66670.13.4e-0962.50CLP protease proteolytic subunit 3 [more]
AT5G26580.11.7e-0858.70AGAMOUS-like-34 [more]
AT5G58890.11.7e-0853.06AGAMOUS-like 82 [more]
AT5G55690.13.8e-0850.98MADS-box transcription factor family protein [more]
AT1G31640.14.9e-0844.26AGAMOUS-like 92 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 74..89
score: 69.15
coord: 89..110
score: 23.3
coord: 54..74
score: 35.8
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 52..111
e-value: 4.5E-13
score: 59.4
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 62..102
e-value: 3.7E-16
score: 58.4
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 52..98
score: 16.245296
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 64..117
e-value: 3.2E-15
score: 57.6
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 54..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..59
NoneNo IPR availablePANTHERPTHR11945:SF176AGAMOUS-LIKE MADS-BOX PROTEIN AGL82coord: 54..104
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 54..104
IPR033897MADS SRF-likeCDDcd00266MADS_SRF_likecoord: 56..113
e-value: 3.29789E-19
score: 74.2187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G191660.2Cla97C10G191660.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006515 protein quality control for misfolded or incompletely synthesized proteins
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009368 endopeptidase Clp complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009526 plastid envelope
molecular_function GO:0051117 ATPase binding
molecular_function GO:0004176 ATP-dependent peptidase activity
molecular_function GO:0000987 cis-regulatory region sequence-specific DNA binding
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003677 DNA binding