Cla97C10G188990 (gene) Watermelon (97103) v2.5

Overview
NameCla97C10G188990
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionRNA polymerase II elongation factor
LocationCla97Chr10: 5066487 .. 5067143 (-)
RNA-Seq ExpressionCla97C10G188990
SyntenyCla97C10G188990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAACCAAAGATTCCGGTGCCCACATAGTTGAAATCCCAGTAGAACAGGAAAATCAAACTCAGAATCAAAACCTTATGATCTCTGTAATTCAAAACCACCCATTGAGGCAAATTTCCGAAAGCTCTGGCCATTTATTACTCTTAAAGCTTTGGCAACGAGACGAGCATTTGTTCGGTCTCCGAATCGGCCGTCGAGAGACTAAAATGGAGTCTTTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCAATGTGTGCAGAAAATGGTGGGTTGCGGCGGTGGCGATGGGGGCGACGTCAGGGGTGTTCGTGATCATGGTGCAGCTGAAATTGTGGTTGTATTGGAAGGCATCAGGGCAGTTGCAGAGGGAGAAGAGTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGGTCTTGTTTTAATTTGTCTAAAGAGCCTCAAATTGGGAATAGGATGAAGAGTTCAAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCTAGGAATTTCATCACCATTTCTCTTTTTTGCTTTTCTGCCATTGTTTTTGCTGCTTCCAAGTTCATTCTTTGTGGCTTTTAA

mRNA sequence

ATGGCAGAAACCAAAGATTCCGGTGCCCACATAGTTGAAATCCCAGTAGAACAGGAAAATCAAACTCAGAATCAAAACCTTATGATCTCTGTAATTCAAAACCACCCATTGAGGCAAATTTCCGAAAGCTCTGGCCATTTATTACTCTTAAAGCTTTGGCAACGAGACGAGCATTTGTTCGGTCTCCGAATCGGCCGTCGAGAGACTAAAATGGAGTCTTTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCAATGTGTGCAGAAAATGGTGGGTTGCGGCGGTGGCGATGGGGGCGACGTCAGGGGTGTTCGTGATCATGGTGCAGCTGAAATTGTGGTTGTATTGGAAGGCATCAGGGCAGTTGCAGAGGGAGAAGAGTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGGTCTTGTTTTAATTTGTCTAAAGAGCCTCAAATTGGGAATAGGATGAAGAGTTCAAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCTAGGAATTTCATCACCATTTCTCTTTTTTGCTTTTCTGCCATTGTTTTTGCTGCTTCCAAGTTCATTCTTTGTGGCTTTTAA

Coding sequence (CDS)

ATGGCAGAAACCAAAGATTCCGGTGCCCACATAGTTGAAATCCCAGTAGAACAGGAAAATCAAACTCAGAATCAAAACCTTATGATCTCTGTAATTCAAAACCACCCATTGAGGCAAATTTCCGAAAGCTCTGGCCATTTATTACTCTTAAAGCTTTGGCAACGAGACGAGCATTTGTTCGGTCTCCGAATCGGCCGTCGAGAGACTAAAATGGAGTCTTTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCAATGTGTGCAGAAAATGGTGGGTTGCGGCGGTGGCGATGGGGGCGACGTCAGGGGTGTTCGTGATCATGGTGCAGCTGAAATTGTGGTTGTATTGGAAGGCATCAGGGCAGTTGCAGAGGGAGAAGAGTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGGTCTTGTTTTAATTTGTCTAAAGAGCCTCAAATTGGGAATAGGATGAAGAGTTCAAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCTAGGAATTTCATCACCATTTCTCTTTTTTGCTTTTCTGCCATTGTTTTTGCTGCTTCCAAGTTCATTCTTTGTGGCTTTTAA

Protein sequence

MAETKDSGAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSGVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF
Homology
BLAST of Cla97C10G188990 vs. NCBI nr
Match: XP_038905570.1 (uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 uncharacterized protein LOC120091553 [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 6.4e-111
Identity = 206/218 (94.50%), Postives = 211/218 (96.79%), Query Frame = 0

Query: 1   MAETKDSGAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLF 60
           MAETKDSGAHIVEIPVEQEN TQNQN MISVIQ+HPLRQISESSGHLLLLKLWQRDEHLF
Sbjct: 1   MAETKDSGAHIVEIPVEQENHTQNQNPMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF 60

Query: 61  GLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSG 120
           GLRIGRRETKMESLKQQIFQLCC+FFLFHALSLTLLYTSSDPNVC+KWWV AVAMGATSG
Sbjct: 61  GLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPNVCKKWWVPAVAMGATSG 120

Query: 121 VFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 180
           VFVI+VQLKLWLYWKASGQLQREK+ENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS
Sbjct: 121 VFVIVVQLKLWLYWKASGQLQREKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 180

Query: 181 VEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           VEIKWGPLTWFSRNFITI L  FSAIVFAASKFILC F
Sbjct: 181 VEIKWGPLTWFSRNFITIFLLGFSAIVFAASKFILCAF 218

BLAST of Cla97C10G188990 vs. NCBI nr
Match: XP_008449068.1 (PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 199/219 (90.87%), Postives = 206/219 (94.06%), Query Frame = 0

Query: 1   MAETKDS-GAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHL 60
           MA+TKDS  AHIVEIPVEQEN T  QNLMISVIQ+HPLRQISESSGHLLLLKLWQRDEHL
Sbjct: 1   MAQTKDSTAAHIVEIPVEQENHT--QNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATS 120
           FGLRIGRRETKMESLKQQIFQLCC+FFLFHALSLTLLYTSSDP VC+KWWV AV +GATS
Sbjct: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATS 120

Query: 121 GVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180
           GVFVI+VQLKLW+YWKA GQLQREKSENRALTRC QELRMKGSCFNLSKEPQIGNRMKSS
Sbjct: 121 GVFVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSS 180

Query: 181 SVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           SVEIKWGPLTWFSRNFI ISL  FSAIVFAASKFILCGF
Sbjct: 181 SVEIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217

BLAST of Cla97C10G188990 vs. NCBI nr
Match: XP_004149573.1 (uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharacterized protein LOC101219596 [Cucumis sativus] >KGN56048.1 hypothetical protein Csa_010603 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.4e-104
Identity = 197/219 (89.95%), Postives = 206/219 (94.06%), Query Frame = 0

Query: 1   MAETKDS-GAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHL 60
           MAETKDS  AHIVEIPVEQEN T  QNLMISVIQ+HPLRQISESSGHLLLLKLWQRDEHL
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHT--QNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATS 120
           FGLRIGRRETKMESLKQQIFQLCC+FFLFHALSLTLLYTSSDP VC+KWWV AV +GATS
Sbjct: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATS 120

Query: 121 GVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180
           GVFVI+VQLKLW+YWKA GQLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS
Sbjct: 121 GVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180

Query: 181 SVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           SVEIKWGPLTWFSRNFITISL  FSAI+F  SKFILCGF
Sbjct: 181 SVEIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

BLAST of Cla97C10G188990 vs. NCBI nr
Match: XP_023553388.1 (uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 188/216 (87.04%), Postives = 198/216 (91.67%), Query Frame = 0

Query: 3   ETKDSG-AHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLFG 62
           ET+DSG AH+VEIP E      NQN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLFG
Sbjct: 4   ETRDSGAAHVVEIPAE------NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFG 63

Query: 63  LRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSGV 122
           LR+GRRETKMESLKQQIFQLCCYFFLFHALSLTLL+TSSDPNVC KWWV  VAMGATSGV
Sbjct: 64  LRVGRRETKMESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGV 123

Query: 123 FVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 182
           FVI+VQLKLWLYWKAS QLQREKSENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSSV
Sbjct: 124 FVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSV 183

Query: 183 EIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCG 218
           EIKWGPLTW SRNF+TI L CFS IVF ASKFILCG
Sbjct: 184 EIKWGPLTWLSRNFVTIVLLCFSGIVFGASKFILCG 213

BLAST of Cla97C10G188990 vs. NCBI nr
Match: KAG7015562.1 (hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100
Identity = 189/217 (87.10%), Postives = 198/217 (91.24%), Query Frame = 0

Query: 3   ETKDSG--AHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLF 62
           ETKDSG  AH+VEIP E      NQN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF
Sbjct: 4   ETKDSGAAAHVVEIPAE------NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLF 63

Query: 63  GLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSG 122
           GLRIGRRETK+ESLKQQIFQLCCYFFLFHALSLTLL+TSSDPNVC KWWV  VAMGATSG
Sbjct: 64  GLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSG 123

Query: 123 VFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 182
           VFVI+VQLKLWLYWKAS QLQREKSENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSS
Sbjct: 124 VFVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSS 183

Query: 183 VEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCG 218
           VEIKWGPLTW SRNF+TI L CFS IVF ASKFILCG
Sbjct: 184 VEIKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214

BLAST of Cla97C10G188990 vs. ExPASy TrEMBL
Match: A0A1S3BL81 (uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.4e-105
Identity = 199/219 (90.87%), Postives = 206/219 (94.06%), Query Frame = 0

Query: 1   MAETKDS-GAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHL 60
           MA+TKDS  AHIVEIPVEQEN T  QNLMISVIQ+HPLRQISESSGHLLLLKLWQRDEHL
Sbjct: 1   MAQTKDSTAAHIVEIPVEQENHT--QNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATS 120
           FGLRIGRRETKMESLKQQIFQLCC+FFLFHALSLTLLYTSSDP VC+KWWV AV +GATS
Sbjct: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATS 120

Query: 121 GVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180
           GVFVI+VQLKLW+YWKA GQLQREKSENRALTRC QELRMKGSCFNLSKEPQIGNRMKSS
Sbjct: 121 GVFVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSS 180

Query: 181 SVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           SVEIKWGPLTWFSRNFI ISL  FSAIVFAASKFILCGF
Sbjct: 181 SVEIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217

BLAST of Cla97C10G188990 vs. ExPASy TrEMBL
Match: A0A0A0L2U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 197/219 (89.95%), Postives = 206/219 (94.06%), Query Frame = 0

Query: 1   MAETKDS-GAHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHL 60
           MAETKDS  AHIVEIPVEQEN T  QNLMISVIQ+HPLRQISESSGHLLLLKLWQRDEHL
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHT--QNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATS 120
           FGLRIGRRETKMESLKQQIFQLCC+FFLFHALSLTLLYTSSDP VC+KWWV AV +GATS
Sbjct: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATS 120

Query: 121 GVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180
           GVFVI+VQLKLW+YWKA GQLQ+EK+ENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS
Sbjct: 121 GVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSS 180

Query: 181 SVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           SVEIKWGPLTWFSRNFITISL  FSAI+F  SKFILCGF
Sbjct: 181 SVEIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

BLAST of Cla97C10G188990 vs. ExPASy TrEMBL
Match: A0A6J1HN07 (uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.2e-100
Identity = 189/217 (87.10%), Postives = 197/217 (90.78%), Query Frame = 0

Query: 3   ETKDSGA--HIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLF 62
           ETKDSGA  HIVEIP E      NQN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF
Sbjct: 4   ETKDSGAATHIVEIPAE------NQNIMISVIEQHPLRQISESSGHLLLLKLWQREEHLF 63

Query: 63  GLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSG 122
           GLRIGRRETK+ESLKQQIFQLCCYFFLFHALSLTLL+TSSDPNVC KWWV  VAMGATSG
Sbjct: 64  GLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSG 123

Query: 123 VFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 182
           VFVI+VQLKLWLYWKAS QLQREKSENRALTR VQELRMKGSCFNLSKEPQIG+RMKSSS
Sbjct: 124 VFVIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKSSS 183

Query: 183 VEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCG 218
           VEIKWGPLTW SRNF+TI L CFS IVF ASKFILCG
Sbjct: 184 VEIKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCG 214

BLAST of Cla97C10G188990 vs. ExPASy TrEMBL
Match: A0A6J1EWB5 (uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC111438709 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.7e-99
Identity = 188/217 (86.64%), Postives = 197/217 (90.78%), Query Frame = 0

Query: 3   ETKDSG--AHIVEIPVEQENQTQNQNLMISVIQNHPLRQISESSGHLLLLKLWQRDEHLF 62
           ETKDSG  AH+VEIP E      NQN+MISVI+ HPLRQISESSGHLLLLKLWQR+EHLF
Sbjct: 4   ETKDSGAAAHVVEIPAE------NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLF 63

Query: 63  GLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSG 122
           GLRIGRRETK+ESLKQQIFQLCCYFFLFHALSLTLL+TSSDPNVC KWWV  VAMGATSG
Sbjct: 64  GLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSG 123

Query: 123 VFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 182
           VFVI+VQLKLWLYWKAS QLQREKSENRALTRCVQELRMKGSCFNLSKEPQIG+RMKSSS
Sbjct: 124 VFVIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSS 183

Query: 183 VEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCG 218
           VEIKWGPLT  SRNF+TI L CFS IVF ASKFILCG
Sbjct: 184 VEIKWGPLTLLSRNFVTIVLLCFSGIVFGASKFILCG 214

BLAST of Cla97C10G188990 vs. ExPASy TrEMBL
Match: A0A5A7VJ68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001520 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.0e-71
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0

Query: 71  MESLKQQIFQLCCYFFLFHALSLTLLYTSSDPNVCRKWWVAAVAMGATSGVFVIMVQLKL 130
           MESLKQQIFQLCC+FFLFHALSLTLLYTSSDP VC+KWWV AV +GATSGVFVI+VQLKL
Sbjct: 1   MESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGVFVIVVQLKL 60

Query: 131 WLYWKASGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW 190
           W+YWKA GQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW
Sbjct: 61  WMYWKARGQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPLTW 120

Query: 191 FSRNFITISLFCFSAIVFAASKFILCGF 219
           FSRNFI ISL  FSAIVFAASKFILCGF
Sbjct: 121 FSRNFIAISLLGFSAIVFAASKFILCGF 148

BLAST of Cla97C10G188990 vs. TAIR 10
Match: AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 238.8 bits (608), Expect = 4.1e-63
Identity = 126/238 (52.94%), Postives = 165/238 (69.33%), Query Frame = 0

Query: 1   MAETKDSGAHIVEIPVEQENQTQNQNL-----------MISVIQNHPLRQISESSGHLLL 60
           MA TKDS  H+VEIPV++E++ + Q             ++ VIQ HPL +ISES GHLLL
Sbjct: 1   MAGTKDS--HVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLL 60

Query: 61  LKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLTLLYTSSDPN------ 120
           LKLWQR+E LF  R+  +E+++ES+K++IFQLCC+F +FH    TL+Y+SS  +      
Sbjct: 61  LKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVVK 120

Query: 121 ---VCRKWWVAAVAMGATSGVFVIMVQLKLWLYWKASGQLQREKSENRALTRCVQELRMK 180
              VC+KWW+ +    ATS V V +VQ KL+++WK    + RE+++NR LTRCV ELRMK
Sbjct: 121 SNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRMK 180

Query: 181 GSCFNLSKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLFCFSAIVFAASKFILCGF 219
           GS F+LSKEP  G RMKSSSVEIKW P+TWFS+  ITI L C + + F  SKFILCGF
Sbjct: 181 GSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAGLFFPVSKFILCGF 236

BLAST of Cla97C10G188990 vs. TAIR 10
Match: AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 7.5e-25
Identity = 67/190 (35.26%), Postives = 112/190 (58.95%), Query Frame = 0

Query: 35  HPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCYFFLFHALSLT 94
           HPL QI+++  H LLLK W ++E L   R+  +E++++S++++I QL  +FFLFH++SL 
Sbjct: 18  HPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLFHSISLL 77

Query: 95  LLY-------TSSDPNVCRKWWVAAVAMGATSGVFVIMVQLKLWLYWKASGQLQREKSEN 154
           LL+       +S+  + C++ W+ ++    +S   +  V+ K  +       L+REK + 
Sbjct: 78  LLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLEREKEDA 137

Query: 155 RALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPL-TWFSRNFITISLFCFSAI 214
           + L +CV+EL+ KG  F+L KE     R KS  VE K  P+  W +R+F+T+  F  S +
Sbjct: 138 KLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESK--PVKKWSARDFVTLFFFSVSCL 197

Query: 215 VFAASKFILC 217
           V A  + ILC
Sbjct: 198 VLAMIRLILC 205

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905570.16.4e-11194.50uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 unchara... [more]
XP_008449068.11.5e-10490.87PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 P... [more]
XP_004149573.13.4e-10489.95uncharacterized protein LOC101219596 [Cucumis sativus] >XP_011650492.1 uncharact... [more]
XP_023553388.11.8e-10087.04uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo][more]
KAG7015562.11.8e-10087.10hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BL817.4e-10590.87uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=... [more]
A0A0A0L2U71.7e-10489.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1[more]
A0A6J1HN077.2e-10087.10uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114... [more]
A0A6J1EWB52.7e-9986.64uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC1114387... [more]
A0A5A7VJ687.0e-7191.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G56120.14.1e-6352.94unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G12870.17.5e-2535.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availablePANTHERPTHR33287:SF3OS03G0453550 PROTEINcoord: 22..217
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 22..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G188990.1Cla97C10G188990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane