Cla97C09G166630 (gene) Watermelon (97103) v2.5

Overview
NameCla97C09G166630
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr09: 3629451 .. 3630455 (+)
RNA-Seq ExpressionCla97C09G166630
SyntenyCla97C09G166630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTCGGACATTTGATACGGAACTGAAAATTTTCCTTTTACATTTATATTTGTGAACCACGAACGAAAAGGCCTTCTCTTCTACTTTACGTTTCTGCGCCAAACACAAATTACCCACCCCTCGGGTCAGTTCATGACTTTTTTCAATTCCATCGTTCCTCAAATTCATCTTCCGATCCTCAATCGGCGCTAGCGGAACCCAATCGCCCTCCAGTTTTGCAGTCCAAGCTGAGGATTTTCATTTTCAGATTCAAGATTGTTCCACAGACCGACTGGGTATGTTCTTGATTGATTTTGATCCGTTGAATAATTTTACTCTCTCGCTGTCGGTTGTTTTGAATTCTGTATTTGCTTGTGTTTTCCCTTTTGATTGTGATTGTTCTTCGCGGGCTTTTGGGTTCTGGAGCTAGGGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTCTTTCTTTGATATGGTTTCACTTTTATTACGCGGATGTTTTTGTGCTGTTTCTCCACCACGCACGCGACATTTTAATATGGGCTCTCGTGATTTTTACCTGCATATCGGAAATTCGGAGTGTGGTATTTGTTAATCGTCGTCTGCAGTTTGATTGCTGTTAATTTTATTTAATATTCCCTGTTTTGATTTGGTCGGTTAACTGTCATGAGTTTTTGATCGGTGTTCGATTACGACAAAGGCCCATACTGAAGCAGATTGTATTAAGAGATTTTGTTGATGATTGTTAATATTAATTCGTCCGTGTGAGCCTTATTTTTCTAATAAATTGGCACTGTTTTTGTGTTTATATTTTGTCTTCTCTTTACATAGAGGTGTGGGATTAACAATGTTATGTTTAATTAGTGAAGAAGTCGGGGGCTGTTTGAAGGGAGAAGGTTTTCATCTATCCTTCGGGATTTCCCATTTTTTTTCCCTGTTTGATTTGAATCTTATGTTTTTTTTTTTTCAAGGATTGTCTGCTAAGTTTGGTTCTCTCCTTTTACTTCACCATTTAA

mRNA sequence

ATGGAATTTCGGACATTTGATACGGAACTGAAAATTTTCCTTTTACATTTATATTTGCCTTCTCTTCTACTTTACGTTTCTGCGCCAAACACAAATTACCCACCCCTCGGGTCAGTTCATGACTTTTTTCAATTCCATCGTTCCTCAAATTCATCTTCCGATCCTCAATCGGCGCTAGCGGAACCCAATCGCCCTCCAGTTTTGCAGTCCAAGCTGAGGATTTTCATTTTCAGATTCAAGATTGTTCCACAGACCGACTGGGATTGTCTGCTAAGTTTGGTTCTCTCCTTTTACTTCACCATTTAA

Coding sequence (CDS)

ATGGAATTTCGGACATTTGATACGGAACTGAAAATTTTCCTTTTACATTTATATTTGCCTTCTCTTCTACTTTACGTTTCTGCGCCAAACACAAATTACCCACCCCTCGGGTCAGTTCATGACTTTTTTCAATTCCATCGTTCCTCAAATTCATCTTCCGATCCTCAATCGGCGCTAGCGGAACCCAATCGCCCTCCAGTTTTGCAGTCCAAGCTGAGGATTTTCATTTTCAGATTCAAGATTGTTCCACAGACCGACTGGGATTGTCTGCTAAGTTTGGTTCTCTCCTTTTACTTCACCATTTAA

Protein sequence

MEFRTFDTELKIFLLHLYLPSLLLYVSAPNTNYPPLGSVHDFFQFHRSSNSSSDPQSALAEPNRPPVLQSKLRIFIFRFKIVPQTDWDCLLSLVLSFYFTI
Homology
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BLAST of Cla97C09G166630 vs. NCBI nr
Match: KAG6593316.1 (hypothetical protein SDJN03_12792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-06
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0 

Query: 30 NTNYPPLGSVHDFFQFHRSSNSSSDPQSALAEPNRPPVLQSKLRIFIFRFKIV 83
          NTN+P  GSV+D FQ +RSSNSS+D QS LAE +R  V QSK +I I RFK+V
Sbjct: 25 NTNFPAFGSVNDQFQSNRSSNSSTDLQSGLAESDRRRVSQSKRKISILRFKVV 77

The following BLAST results are available for this feature:
BLAST of Cla97C09G166630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593316.12.6e-0662.26hypothetical protein SDJN03_12792, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cla97C09G166630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G166630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C09G166630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G166630.1Cla97C09G166630.1mRNA