Cla97C09G165660 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C09G165660
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr09: 2789580 .. 2791022 (+)
RNA-Seq Expression	Cla97C09G165660
Synteny	Cla97C09G165660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGTAGAAAGTAAGTTACAACAAGAAGAGTTCTATGAGGGTGTTAATTTCATGTTATAGTGACCTTCACTCATATGCCTTCTTGTTATTTGATTGGAAAAATTTGGAGACACCTTTTGAACCTGCATGGCTTGCCTGCTTCTTGGTAGACTTCTGAGAATATGGTTTTTTAGATTTATGTCATTCTTATGATATTGGCTCAAACGAAAATACTGTCCTCCTCTAAGCAATCGCTTGTTGAGCTCTTTTTCTTTCAATCACTGTATCAAGTTTACATCTTTGAATGTTCTACAATATTATTTTCCTCTAAAATATATAAATACCATCCTGAAAATATAATAAGTATCTTTGAATTTTTTTTCCAAGCGATCTGCTTAATGGGTTGAGAAGTGCATTTTTGGATTCTTTATTAGTTGTCAGCAATAAGATAGCTAGTTTTGGGGCTTCTGTTGTAAAAAAAACAATTTGGCTTGACTTCTCTATCGCTCATGACTTGCATTGTAGTCCTATTGACCACGACTGTTTCTGGAAGGGTTGGTTGCATCATTCTTACATCACTCGGTGATGGAAGAGTAGGAGAACTACACTACGGTTGGTTAACTTGGTCGCAATTGTTTTGCCTCTGTTTGTACTAGATCTAAGAGATGGACAGTTGTACTAGTGTTAGTTCTACTTTCCGAAAAGAAAAAAAAGTGCGAGTGTTTAGTCTTTAATTGTATAATATTTGGAATGTCTCATTCTGGGCGAAGTCACCACCAACAGTATTAGAAACTGAGATCAATTGTTTTTTCTCAAAATTGCTGCATATCCTGCTATATGAACTTCAATCTTATTGTGGGAGAAAAAAAATCAAGATTCATGTAGCAAGCTATCTAATATGTGCTGTATATTTCAGGCTGACTGAGGAAGTTGGATCATGCGACATGGTTCTTGACAGTGTATTGTCATCTCCTCACAGGAGGTCACCATCAATCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTGCAGCGGCATCGCTTCCTCCTGACAGCACTTGCCCTCTTGACCTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCGTCCTCCTCTTGCTTTGGACTGACTGGGACGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGATACTCGGGATTGTGCTCCAAAGCGTGTGTCTTTTGTTTGTAGTTCTCGACAATTTGTGTTGAAGGCTTGAAAAAGAAAAAAAAAAAATGAAGTTAGTCAGTTTGTTATACAAGGTTGTGTAGTCAGATGTAAGCGAACTCTCTATACATGATATCTGAGAAAAAAATTGCATTAATCAATCATTTTGTGTTTGCAGATTTATAATGTATATGCTTTTCAGTGCATGAAAATTAA

mRNA sequence

ATGGGTTGTAGAAAGCTGACTGAGGAAGTTGGATCATGCGACATGGTTCTTGACAGTGTATTGTCATCTCCTCACAGGAGGTCACCATCAATCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTGCAGCGGCATCGCTTCCTCCTGACAGCACTTGCCCTCTTGACCTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCGTCCTCCTCTTGCTTTGGACTGACTGGGACGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGATACTCGGGATTGTGCTCCAAAGCGTGTGTCTTTTGTTTGTAGTTCTCGACAATTTGTGTTGAAGGCTTGAAAAAGAAAAAAAAAAAATGAAGTTAGTCAGTTTGTTATACAAGGTTGTGTAGTCAGATGTAAGCGAACTCTCTATACATGATATCTGAGAAAAAAATTGCATTAATCAATCATTTTGTGTTTGCAGATTTATAATGTATATGCTTTTCAGTGCATGAAAATTAA

Coding sequence (CDS)

ATGGGTTGTAGAAAGCTGACTGAGGAAGTTGGATCATGCGACATGGTTCTTGACAGTGTATTGTCATCTCCTCACAGGAGGTCACCATCAATCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTCGTGCAGCGGCATCGCTTCCTCCTGACAGCACTTGCCCTCTTGACCTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCGTCCTCCTCTTGCTTTGGACTGACTGGGACGCAAAAAGCTCAGTGTCAACTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAACTGAAAATTCTTTGA

Protein sequence

MGCRKLTEEVGSCDMVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL

Homology

[Close]

BLAST of Cla97C09G165660 vs. NCBI nr
Match: KAA0058699.1 (hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa] >TYK10505.1 hypothetical protein E5676_scaffold459G001550 [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 5.1e-45
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 5   KLTEEVGSCDMVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCT 64
           +LTEE+GSC+MVLDSVLSSPHRRSPS RKSFPNELGSWSTL+QRHRFLLTAL LLTFLCT
Sbjct: 17  RLTEEIGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCT 76

Query: 65  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTS+AKGKLKIL
Sbjct: 77  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSIAKGKLKIL 119

[Close]

BLAST of Cla97C09G165660 vs. NCBI nr
Match: KAE8646426.1 (hypothetical protein Csa_016913 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 5   KLTEEVGSCDMVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCT 64
           +LTEE GSC MVLDSVLSSPHRRSPS RKSFPNELGSWSTLVQRHRFLLTAL LLTFLCT
Sbjct: 36  RLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCT 95

Query: 65  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLGSSSSCFGLTGTQKAQC LELAKTSMAKGKLKIL
Sbjct: 96  IYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 138

[Close]

BLAST of Cla97C09G165660 vs. NCBI nr
Match: KAG7025704.1 (hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 6   LTEEVGSCDMVLDSVLSSPHRRSPSIRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCT 65
           LTEEVGSC+MVLDSVLSSPHRRSPS RK+F PNELGSWSTLVQRHRFLLTAL LLTFLCT
Sbjct: 11  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCT 70

Query: 66  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLG SSSC GLTG QKAQCQLELAKTSMAKGKLKIL
Sbjct: 71  IYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL 112

[Close]

BLAST of Cla97C09G165660 vs. NCBI nr
Match: KAG6593358.1 (hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 95/103 (92.23%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 6   LTEEVGSCDMVLDSVLSSPHRRSPSIRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCT 65
           LTEEVGSC+MVLDSVLSSPHRRSPS RK+F PNELGSWSTLVQRHRFLLTAL LLTFLCT
Sbjct: 16  LTEEVGSCNMVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCT 75

Query: 66  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLG SSSC GLTG QKAQCQLELAKTSMAKGKLKIL
Sbjct: 76  IYLYFAVTLG-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL 117

[Close]

BLAST of Cla97C09G165660 vs. NCBI nr
Match: XP_011659492.1 (uncharacterized protein LOC101216292 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 6.5e-40
Identity = 90/93 (96.77%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLG 74
           MVLDSVLSSPHRRSPS RKSFPNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTLG
Sbjct: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60

Query: 75  SSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           SSSSCFGLTGTQKAQC LELAKTSMAKGKLKIL
Sbjct: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 93

[Close]

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL
Match: A0A5D3CG60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001550 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 5   KLTEEVGSCDMVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCT 64
           +LTEE+GSC+MVLDSVLSSPHRRSPS RKSFPNELGSWSTL+QRHRFLLTAL LLTFLCT
Sbjct: 17  RLTEEIGSCNMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCT 76

Query: 65  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTS+AKGKLKIL
Sbjct: 77  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSIAKGKLKIL 119

[Close]

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL
Match: A0A0A0K6S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431400 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.5e-45
Identity = 97/103 (94.17%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 5   KLTEEVGSCDMVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCT 64
           +LTEE GSC MVLDSVLSSPHRRSPS RKSFPNELGSWSTLVQRHRFLLTAL LLTFLCT
Sbjct: 17  RLTEEAGSCTMVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCT 76

Query: 65  IYLYFAVTLGSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           IYLYFAVTLGSSSSCFGLTGTQKAQC LELAKTSMAKGKLKIL
Sbjct: 77  IYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

[Close]

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL
Match: A0A1S4E387 (uncharacterized protein LOC103499851 OS=Cucumis melo OX=3656 GN=LOC103499851 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLG 74
           MVLDSVLSSPHRRSPS RKSFPNELGSWSTL+QRHRFLLTAL LLTFLCTIYLYFAVTLG
Sbjct: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCTIYLYFAVTLG 60

Query: 75  SSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           SSSSC+GLTGTQKAQCQLELAKTS+AKGKLKIL
Sbjct: 61  SSSSCYGLTGTQKAQCQLELAKTSIAKGKLKIL 93

[Close]

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL
Match: A0A6J1DQE0 (uncharacterized protein LOC111022141 OS=Momordica charantia OX=3673 GN=LOC111022141 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.1e-36
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTL 74
           MVLDSVLSSPHRRSPS RK F PNE GSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTL
Sbjct: 1   MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60

Query: 75  GSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           GSSSSCFG+TG QK QC+LELAK SMAKGKLKIL
Sbjct: 61  GSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL 94

[Close]

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL
Match: A0A6J1H8Z6 (uncharacterized protein LOC111460722 OS=Cucurbita moschata OX=3662 GN=LOC111460722 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSF-PNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTL 74
           MVLDSVLSSPHRRSPS RK+F PNELGSWSTLVQRHRFLLTAL LLTFLCTIYLYFAVTL
Sbjct: 1   MVLDSVLSSPHRRSPSFRKAFPPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60

Query: 75  GSSSSCFGLTGTQKAQCQLELAKTSMAKGKLKIL 108
           G SSSC GLTG QKAQCQLELAKTSMAKGKLKIL
Sbjct: 61  G-SSSCSGLTGAQKAQCQLELAKTSMAKGKLKIL 93

[Close]

BLAST of Cla97C09G165660 vs. TAIR 10
Match: AT1G16170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25
Identity = 60/92 (65.22%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLG 74
           MVLD ++SSP RR   ++K + +ELGSWSTL+QRH++LLTALALL FLCT+YLYFAVTLG
Sbjct: 1   MVLDGLVSSPSRRQQCLKKQW-DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTLG 60

Query: 75  S-SSSCFGLTGTQKAQCQLELAKTSMAKGKLK 106
           +  SSC+GLTG  KA CQL+L + +++KGKLK
Sbjct: 61  ARHSSCYGLTGKDKAMCQLQLVQ-ALSKGKLK 90

[Close]

BLAST of Cla97C09G165660 vs. TAIR 10
Match: AT1G79660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21
Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 15  MVLDSVLSSPHRRSPSIRKSFPNELGSWSTLVQRHRFLLTALALLTFLCTIYLYFAVTLG 74
           MVLD ++SSP RR  +++K + ++LGS ST+VQRHRFLLTA+ LL FLCTIY+YFAVTLG
Sbjct: 1   MVLDGIVSSPLRRPHALKKQW-DDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTLG 60

Query: 75  SSS-SCFGLTGTQKAQCQLELAKTSMAKGKLK 106
           +    C G+TG  KA CQ+E  + S + GKLK
Sbjct: 61  ARHLLCSGMTGKDKAMCQMEHIQASFSNGKLK 91

The following BLAST results are available for this feature:

BLAST of Cla97C09G165660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058699.1	5.1e-45	93.20	hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa] >TYK105...	[more]
KAE8646426.1	1.1e-44	94.17	hypothetical protein Csa_016913 [Cucumis sativus]	[more]
KAG7025704.1	1.3e-40	92.23	hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6593358.1	1.3e-40	92.23	hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011659492.1	6.5e-40	96.77	uncharacterized protein LOC101216292 [Cucumis sativus]	[more]

BLAST of Cla97C09G165660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C09G165660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG60	2.5e-45	93.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K6S1	5.5e-45	94.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431400 PE=4 SV=1	[more]
A0A1S4E387	1.2e-39	94.62	uncharacterized protein LOC103499851 OS=Cucumis melo OX=3656 GN=LOC103499851 PE=...	[more]
A0A6J1DQE0	6.1e-36	89.36	uncharacterized protein LOC111022141 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1H8Z6	1.0e-35	92.55	uncharacterized protein LOC111460722 OS=Cucurbita moschata OX=3662 GN=LOC1114607...	[more]

BLAST of Cla97C09G165660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16170.1	1.3e-25	65.22	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G79660.1	1.9e-21	58.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34774:SF1	EPHRIN-A3 PROTEIN	coord: 5..107
None	No IPR available	PANTHER	PTHR34774	EPHRIN-A3 PROTEIN	coord: 5..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G165660.2	Cla97C09G165660.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane