Cla97C08G155810 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G155810
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 23772203 .. 23772670 (+)
RNA-Seq ExpressionCla97C08G155810
SyntenyCla97C08G155810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTCTTGATGTTGCGGCATTTAGCGACAAATTGGGTCTGAATCCAAATCCCATGGCTATGGCTTTTTCCTTTCCCCCTTCCCATTTTTTGCATTCTACGCTTCCTTTTCTCATCCAGCTGTTTCTTCCTTCCCTTTTTCCTATTGGGTTTCTCCCCATTTTTCTATACTCCTCAAATCCCACTCTCTTTCTCCTTTTACTTTCTTGCTTTCAGTCCCCATTCCCCCAAATTTTCTCTCTTCTTTCTTCTTCATCCCTCACAATTGACGAATTGTTTGATCTCTTCAGAATGTAATTGACTGCAATTTCTCAGGTACATGATTCCTTGCCACTCATTTCGTTTCCTTTTCTTCATTCATGATTCTCGCCATCGCTGTTTCTGATTAGATCTTTCATCTCTCTCTTGAGGAAAAACTTGCAGGGTGTTGATTTTGATAATGGGTCTGAATCTGTTTTCCACTAG

mRNA sequence

ATGTTGATTCTTGATGTTGCGGCATTTAGCGACAAATTGGGTCTGAATCCAAATCCCATGGCTATGGCTTTTTCCTTTCCCCCTTCCCATTTTTTGCATTCTACGCTTCCTTTTCTCATCCAGCTGTTTCTTCCTTCCCTTTTTCCTATTGGGTTTCTCCCCATTTTTCTATACTCCTCAAATCCCACTCTCTTTCTCCTTTTACTTTCTTGCTTTCAGTCCCCATTCCCCCAAATTTTCTCTCTTCTTTCTTCTTCATCCCTCACAATTGACGAATTGTTTGATCTCTTCAGAATATCTTTCATCTCTCTCTTGAGGAAAAACTTGCAGGGTGTTGATTTTGATAATGGGTCTGAATCTGTTTTCCACTAG

Coding sequence (CDS)

ATGTTGATTCTTGATGTTGCGGCATTTAGCGACAAATTGGGTCTGAATCCAAATCCCATGGCTATGGCTTTTTCCTTTCCCCCTTCCCATTTTTTGCATTCTACGCTTCCTTTTCTCATCCAGCTGTTTCTTCCTTCCCTTTTTCCTATTGGGTTTCTCCCCATTTTTCTATACTCCTCAAATCCCACTCTCTTTCTCCTTTTACTTTCTTGCTTTCAGTCCCCATTCCCCCAAATTTTCTCTCTTCTTTCTTCTTCATCCCTCACAATTGACGAATTGTTTGATCTCTTCAGAATATCTTTCATCTCTCTCTTGAGGAAAAACTTGCAGGGTGTTGATTTTGATAATGGGTCTGAATCTGTTTTCCACTAG

Protein sequence

MLILDVAAFSDKLGLNPNPMAMAFSFPPSHFLHSTLPFLIQLFLPSLFPIGFLPIFLYSSNPTLFLLLLSCFQSPFPQIFSLLSSSSLTIDELFDLFRISFISLLRKNLQGVDFDNGSESVFH
Homology
[Close]
BLAST of Cla97C08G155810 vs. NCBI nr
Match: KGN62857.1 (hypothetical protein Csa_022054 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 7  AAFSDKLGLNPNPMAM--AFSFPPSHFLHSTLPFLIQLFLPSLFPIGFLPIFLYSSNPTL 66
          A FSDKLGLNPN MAM  A +F  SHF +STLPFLIQLFL    PIGF+PIFLYSSN TL
Sbjct: 7  ATFSDKLGLNPNLMAMALALAFFLSHFFNSTLPFLIQLFL----PIGFIPIFLYSSNLTL 66

Query: 67 FLLLLSCFQSPFPQIFSLLSS 86
          FLLLL CF    P  F  L+S
Sbjct: 67 FLLLLYCFHFQLPSCFIPLNS 83

[Close]
BLAST of Cla97C08G155810 vs. ExPASy TrEMBL
Match: A0A0A0LPW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377930 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14
Identity = 55/81 (67.90%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 7  AAFSDKLGLNPNPMAM--AFSFPPSHFLHSTLPFLIQLFLPSLFPIGFLPIFLYSSNPTL 66
          A FSDKLGLNPN MAM  A +F  SHF +STLPFLIQLFL    PIGF+PIFLYSSN TL
Sbjct: 7  ATFSDKLGLNPNLMAMALALAFFLSHFFNSTLPFLIQLFL----PIGFIPIFLYSSNLTL 66

Query: 67 FLLLLSCFQSPFPQIFSLLSS 86
          FLLLL CF    P  F  L+S
Sbjct: 67 FLLLLYCFHFQLPSCFIPLNS 83

The following BLAST results are available for this feature:
BLAST of Cla97C08G155810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62857.12.4e-1467.90hypothetical protein Csa_022054 [Cucumis sativus][more]
BLAST of Cla97C08G155810 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cla97C08G155810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPW31.2e-1467.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377930 PE=4 SV=1[more]
BLAST of Cla97C08G155810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G155810.1Cla97C08G155810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane