Cla97C08G149560 (gene) Watermelon (97103) v2.5

Overview
NameCla97C08G149560
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr08: 17937904 .. 17938236 (+)
RNA-Seq ExpressionCla97C08G149560
SyntenyCla97C08G149560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCAGCATTGGCGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTCGCCCTCGAAAGTTGCGGCCGCTGCCACAAGCTACGGTATTTCTTTCCTTCCACTGCTGCCACGTCCGCTCTTATTCCGTCACGACAGCAGCTATCTCCCACCGTTGCCAGCGGCGAAGGAGTATCCAGCGAAACCCCTTCGTCGTGTAAATGGTGAGCGCAAAAACAAGTGTACCAAAGCACACAGAAATGGAGATAAAGTTACAAAGCCGACCAAGGATCCGTGGCCGAAGTGCTCCGTTCGCAAATCGCCACCGCCTCCATTCTAG

mRNA sequence

ATGGCGTCAGCATTGGCGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTCGCCCTCGAAAGTTGCGGCCGCTGCCACAAGCTACGGTATTTCTTTCCTTCCACTGCTGCCACGTCCGCTCTTATTCCGTCACGACAGCAGCTATCTCCCACCGTTGCCAGCGGCGAAGGAGTATCCAGCGAAACCCCTTCGTCGTGTAAATGGTGAGCGCAAAAACAAGTGTACCAAAGCACACAGAAATGGAGATAAAGTTACAAAGCCGACCAAGGATCCGTGGCCGAAGTGCTCCGTTCGCAAATCGCCACCGCCTCCATTCTAG

Coding sequence (CDS)

ATGGCGTCAGCATTGGCGGCTTATCTATTTTTTGCCATTTTGGTGGCATCCTTCTCTCCGAGCTCGCCCTCGAAAGTTGCGGCCGCTGCCACAAGCTACGGTATTTCTTTCCTTCCACTGCTGCCACGTCCGCTCTTATTCCGTCACGACAGCAGCTATCTCCCACCGTTGCCAGCGGCGAAGGAGTATCCAGCGAAACCCCTTCGTCGTGTAAATGGTGAGCGCAAAAACAAGTGTACCAAAGCACACAGAAATGGAGATAAAGTTACAAAGCCGACCAAGGATCCGTGGCCGAAGTGCTCCGTTCGCAAATCGCCACCGCCTCCATTCTAG

Protein sequence

MASALAAYLFFAILVASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF
Homology
BLAST of Cla97C08G149560 vs. NCBI nr
Match: KAE8646677.1 (hypothetical protein Csa_023590, partial [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-27
Identity = 68/95 (71.58%), Postives = 75/95 (78.95%), Query Frame = 0

Query: 16  ASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYPAKPLRRVNGER 75
           ASFSPSS S  A AA SYGI + P LPRPLLF +D S LPP PAA+EYPAK  RRVNGER
Sbjct: 1   ASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAEEYPAKSPRRVNGER 60

Query: 76  KNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF 111
           K+KC++A RNG+K  KP KDPWPKC V KSPPPPF
Sbjct: 61  KDKCSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 95

BLAST of Cla97C08G149560 vs. NCBI nr
Match: KAA0054906.1 (hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22694.1 hypothetical protein E5676_scaffold1163G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-26
Identity = 71/106 (66.98%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 7   AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYP 66
           AYLF AI +A  SFSPSS S  A A  S+GI + P LPR LLF +D S LP  PAA+EYP
Sbjct: 6   AYLFLAIFLAMVSFSPSSLSISATAIPSHGIPYPPPLPRSLLFHNDHSSLPQSPAAEEYP 65

Query: 67  AKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF 111
           AKPL+RVNGERK+KCT+A RNG+K  K +KDPWPKC V KSPPPPF
Sbjct: 66  AKPLQRVNGERKDKCTEAPRNGNKDAKSSKDPWPKCPVSKSPPPPF 111

BLAST of Cla97C08G149560 vs. ExPASy TrEMBL
Match: A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-29
Identity = 76/106 (71.70%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 7   AYLFFAIL--VASFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYP 66
           AYLF AIL  VASFSPSS S  A AA SYGI + P LPRPLLF +D S LPP PAA+EYP
Sbjct: 6   AYLFLAILLAVASFSPSSLSIAATAAPSYGIPYPPPLPRPLLFHNDHSSLPPSPAAEEYP 65

Query: 67  AKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF 111
           AK  RRVNGERK+KC++A RNG+K  KP KDPWPKC V KSPPPPF
Sbjct: 66  AKSPRRVNGERKDKCSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 111

BLAST of Cla97C08G149560 vs. ExPASy TrEMBL
Match: A0A5D3DGG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00110 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.0e-26
Identity = 71/106 (66.98%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 7   AYLFFAILVA--SFSPSSPSKVAAAATSYGISFLPLLPRPLLFRHDSSYLPPLPAAKEYP 66
           AYLF AI +A  SFSPSS S  A A  S+GI + P LPR LLF +D S LP  PAA+EYP
Sbjct: 6   AYLFLAIFLAMVSFSPSSLSISATAIPSHGIPYPPPLPRSLLFHNDHSSLPQSPAAEEYP 65

Query: 67  AKPLRRVNGERKNKCTKAHRNGDKVTKPTKDPWPKCSVRKSPPPPF 111
           AKPL+RVNGERK+KCT+A RNG+K  K +KDPWPKC V KSPPPPF
Sbjct: 66  AKPLQRVNGERKDKCTEAPRNGNKDAKSSKDPWPKCPVSKSPPPPF 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8646677.16.5e-2771.58hypothetical protein Csa_023590, partial [Cucumis sativus][more]
KAA0054906.14.2e-2666.98hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KEF92.0e-2971.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1[more]
A0A5D3DGG92.0e-2666.98Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G149560.1Cla97C08G149560.1mRNA