Cla97C08G147640 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGACTGTAAACTGCCCGAGGATTTGGATGATATGAACTCAAATTTGGCTACCACTAAGGGAGACAAGATCAATTTCATTGAGATATCAAATGAATGGACCAAGTGGAGAGAGGTGAGTTGGCACAACAAATGTTTTATGAATGGGAGTTTATAATAATTTGTAGTTTTATTCAACTCTAGTTAATTAGAACTTCTAATTTCTCTTTAATGTCTTTATAAAATAACTAATTTATTTTGAACTTTGTTCTTAAAAATGTAAACTTTGTCTACAATAATTACAAAAAATACATGAAGAATTTTAGTACGTTCTACTTTAACCTTATTATAATGTATATATACATATAGTAAAATGTCAAGGCTAGAGCACCAAAGCACATCTAGACAAAAGAGAAGAATGCAAAGTTGGTCAAATGCTTAATGTCCTTGGTCCAGGTTGGTGGATGGAGATTAGATAATGGGATGTTTCAACCCGGCTACTTGGCTTAGCTACAACGTATGATGACAGAGAAGATACCCGACTGTAAGATCCAAGGAATCCCCACCATAGATTGCAGGATTTAAACCCTAGAAAAACATTACCGAGCAATTGTAGAGATGTAAGTACTAGCCTGTAGTAGATTTGGCTAGAATGAAGAATTTCAATGCATTGTTGTAGAGAGGGAGACGTTCGATGGATGAGTGTGAAGGTAAGAATTCAAAATCATGTTATACTCACATTATTTAGCATTGTGTAACATGTACTTTCATCTTCATGGAAAGCCATCCTACAAGGACCAGGATACAGGGGTAGGGTCATAGACCCTTGAAGACATAACGTCAAATTTGCCAGAGCATATGGACGAAGGTGTTCACTTCAATGCATCAAAAGAATACAACATCCCAATATCATCATTTCTTAATCATGGAATGGATATGTCACAAAATGATATGCAAGGAACACCCACTAGTCAAAACACTCCAAAAGGAAATGCATCCACGAGGAGTAAAAGGAACTAAGCTTCATATCACAATGAAGTGGTAGAGGTTGTTAGGGATGTGATGGACATCCAAAATAGCCAAATGAGGACGATTGAAGAATGGCCAAAGAGAATTGTGCAACAAAGTTCAGTTTACATGTTGCAGCAGTGA ATGGGTGACTGTAAACTGCCCGAGGATTTGGATGATATGAACTCAAATTTGGCTACCACTAAGGGAGACAAGATCAATTTCATTGAGATATCAAATGAATGGACCAAGTGGAGAGAGACCCTTGAAGACATAACGTCAAATTTGCCAGAGCATATGGACGAAGGTGTTCACTTCAATGCATCAAAAGAATACAACATCCCAATATCATCATTTCTTAATCATGGAATGGATATGTCACAAAATGATATGCAAGGAACACCCACTAGTCAAAACACTCCAAAAGGAAATGCATCCACGAGGATGGTAGAGGTTGTTAGGGATGTGATGGACATCCAAAATAGCCAAATGAGGACGATTGAAGAATGGCCAAAGAGAATTGTGCAACAAAGTTCAGTTTACATGTTGCAGCAGTGA ATGGGTGACTGTAAACTGCCCGAGGATTTGGATGATATGAACTCAAATTTGGCTACCACTAAGGGAGACAAGATCAATTTCATTGAGATATCAAATGAATGGACCAAGTGGAGAGAGACCCTTGAAGACATAACGTCAAATTTGCCAGAGCATATGGACGAAGGTGTTCACTTCAATGCATCAAAAGAATACAACATCCCAATATCATCATTTCTTAATCATGGAATGGATATGTCACAAAATGATATGCAAGGAACACCCACTAGTCAAAACACTCCAAAAGGAAATGCATCCACGAGGATGGTAGAGGTTGTTAGGGATGTGATGGACATCCAAAATAGCCAAATGAGGACGATTGAAGAATGGCCAAAGAGAATTGTGCAACAAAGTTCAGTTTACATGTTGCAGCAGTGA MGDCKLPEDLDDMNSNLATTKGDKINFIEISNEWTKWRETLEDITSNLPEHMDEGVHFNASKEYNIPISSFLNHGMDMSQNDMQGTPTSQNTPKGNASTRMVEVVRDVMDIQNSQMRTIEEWPKRIVQQSSVYMLQQ Homology
BLAST of Cla97C08G147640 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-07 Identity = 46/168 (27.38%), Postives = 76/168 (45.24%), Query Frame = 0
BLAST of Cla97C08G147640 vs. NCBI nr
Match: KAA0040620.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK05667.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 7.9e-06 Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of Cla97C08G147640 vs. NCBI nr
Match: XP_038885881.1 (protein ALP1-like [Benincasa hispida]) HSP 1 Score: 54.3 bits (129), Expect = 9.6e-04 Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Cla97C08G147640 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-07 Identity = 46/168 (27.38%), Postives = 76/168 (45.24%), Query Frame = 0
BLAST of Cla97C08G147640 vs. ExPASy TrEMBL
Match: A0A5D3C1H4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001300 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.8e-06 Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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