Cla97C07G144180 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATACCATCTACATTTCATCTAACATCTCTCTTCTTTCTTCTCTTTGTCATCACAGCTTCCTCCACCGTCAGCGGCGGCGCAACTGCCCGGAAACTGCTCAACTTTCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGAACCCAGGGAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCGACCGGATTCGGGAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCGGGATACGGGTATGGAAGTGGGAGTGGTGGTGCTCATGTTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTAGCGGTGGCGGTAGCGGTGGCGGATATGGTGGTCCGAGTGGTGACGAGTATCGGTCGCCAACCACTACAAGGGACAAAAACAGGCAAGGGTAG ATGAAAATACCATCTACATTTCATCTAACATCTCTCTTCTTTCTTCTCTTTGTCATCACAGCTTCCTCCACCGTCAGCGGCGGCGCAACTGCCCGGAAACTGCTCAACTTTCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGAACCCAGGGAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCGACCGGATTCGGGAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCGGGATACGGGTATGGAAGTGGGAGTGGTGGTGCTCATGTTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTAGCGGTGGCGGTAGCGGTGGCGGATATGGTGGTCCGAGTGGTGACGAGTATCGGTCGCCAACCACTACAAGGGACAAAAACAGGCAAGGGTAG ATGAAAATACCATCTACATTTCATCTAACATCTCTCTTCTTTCTTCTCTTTGTCATCACAGCTTCCTCCACCGTCAGCGGCGGCGCAACTGCCCGGAAACTGCTCAACTTTCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGTTGGGGTTCGAACCCAGGGAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCGACCGGATTCGGGAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCGGGATACGGGTATGGAAGTGGGAGTGGTGGTGCTCATGTTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTAGCGGTGGCGGTAGCGGTGGCGGATATGGTGGTCCGAGTGGTGACGAGTATCGGTCGCCAACCACTACAAGGGACAAAAACAGGCAAGGGTAG MKIPSTFHLTSLFFLLFVITASSTVSGGATARKLLNFPDMSWGSPNGGGGNPTGGYGSAHGPNWDYNWGWGSNPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHVGGYGSGSGYGNSSGGGSGGGYGGPSGDEYRSPTTTRDKNRQG Homology
BLAST of Cla97C07G144180 vs. NCBI nr
Match: XP_016901488.1 (PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo] >KAA0044686.1 glycine-rich cell wall structural protein 2 [Cucumis melo var. makuwa] >TYK16898.1 glycine-rich cell wall structural protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 262.3 bits (669), Expect = 2.7e-66 Identity = 147/165 (89.09%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of Cla97C07G144180 vs. NCBI nr
Match: XP_004146895.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN53182.1 hypothetical protein Csa_015364 [Cucumis sativus]) HSP 1 Score: 260.4 bits (664), Expect = 1.0e-65 Identity = 147/166 (88.55%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of Cla97C07G144180 vs. NCBI nr
Match: XP_038899364.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida]) HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63 Identity = 145/163 (88.96%), Postives = 152/163 (93.25%), Query Frame = 0
BLAST of Cla97C07G144180 vs. NCBI nr
Match: XP_022922583.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG7014856.1 hypothetical protein SDJN02_22486, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.3 bits (547), Expect = 3.9e-52 Identity = 132/170 (77.65%), Postives = 136/170 (80.00%), Query Frame = 0
BLAST of Cla97C07G144180 vs. NCBI nr
Match: XP_023553046.1 (keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51 Identity = 133/170 (78.24%), Postives = 138/170 (81.18%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy Swiss-Prot
Match: P35527 (Keratin, type I cytoskeletal 9 OS=Homo sapiens OX=9606 GN=KRT9 PE=1 SV=3) HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04 Identity = 66/144 (45.83%), Postives = 71/144 (49.31%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy TrEMBL
Match: A0A5A7TRC6 (Glycine-rich cell wall structural protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00320 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66 Identity = 147/165 (89.09%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy TrEMBL
Match: A0A1S4DZT0 (glycine-rich cell wall structural protein 2 OS=Cucumis melo OX=3656 GN=LOC103494444 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66 Identity = 147/165 (89.09%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy TrEMBL
Match: A0A0A0KXP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025120 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.1e-66 Identity = 147/166 (88.55%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy TrEMBL
Match: A0A6J1E737 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430548 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52 Identity = 132/170 (77.65%), Postives = 136/170 (80.00%), Query Frame = 0
BLAST of Cla97C07G144180 vs. ExPASy TrEMBL
Match: A0A6J1J236 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482714 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.6e-51 Identity = 130/170 (76.47%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of Cla97C07G144180 vs. TAIR 10
Match: AT5G61660.1 (glycine-rich protein ) HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24 Identity = 78/132 (59.09%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Cla97C07G144180 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family ) HSP 1 Score: 41.6 bits (96), Expect = 7.1e-04 Identity = 47/104 (45.19%), Postives = 56/104 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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