Cla97C07G141190 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G141190
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	RING/U-box protein with C6HC-type zinc finger
Location	Cla97Chr07: 28865296 .. 28865748 (+)
RNA-Seq Expression	Cla97C07G141190
Synteny	Cla97C07G141190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCGAAATCCGCCTCCGAAATGTTCACAAACAGAATTTGTTCCCATACCTTCTGCACCGATTGCATCTCAAGGCACATCGCCGCAAAGCTTGAGGAGACAATGGCGGCGAAGTGCCCGGAGCCGGAAATGTGCGGAGGTTTGGTTCCGAAAGAGTTGTTGGAGCGTTGGGGGGATGCTCTGTTTGAAGCGATGATTCTGAAGTGGAAGAGATTGAAGTGTCCTTTCAAAGACTGGTGGGCGCCGATGATCGATGAGGGGGATGAGGAGTCGGTGGAGTGTCCGAGTTGTTGGAGAATGTTCTGCGCTCAGTGTAAAGTGGGATGGCATGGGGAAATGGAATGCGGAGAATTTGAGAAACTGCGGAAGGAGGCAGGAGGAAGTGTAGACAGAGACGACGTGATGAGGATGAAACTGGCGGATAAAAAGCAAATGGAAGAGATGCCCTAA

mRNA sequence

ATGGATGCGAAATCCGCCTCCGAAATGTTCACAAACAGAATTTGTTCCCATACCTTCTGCACCGATTGCATCTCAAGGCACATCGCCGCAAAGCTTGAGGAGACAATGGCGGCGAAGTGCCCGGAGCCGGAAATGTGCGGAGGTTTGGTTCCGAAAGAGTTGTTGGAGCGTTGGGGGGATGCTCTGTTTGAAGCGATGATTCTGAAGTGGAAGAGATTGAAGTGTCCTTTCAAAGACTGGTGGGCGCCGATGATCGATGAGGGGGATGAGGAGTCGGTGGAGTGTCCGAGTTGTTGGAGAATGTTCTGCGCTCAGTGTAAAGTGGGATGGCATGGGGAAATGGAATGCGGAGAATTTGAGAAACTGCGGAAGGAGGCAGGAGGAAGTGTAGACAGAGACGACGTGATGAGGATGAAACTGGCGGATAAAAAGCAAATGGAAGAGATGCCCTAA

Coding sequence (CDS)

ATGGATGCGAAATCCGCCTCCGAAATGTTCACAAACAGAATTTGTTCCCATACCTTCTGCACCGATTGCATCTCAAGGCACATCGCCGCAAAGCTTGAGGAGACAATGGCGGCGAAGTGCCCGGAGCCGGAAATGTGCGGAGGTTTGGTTCCGAAAGAGTTGTTGGAGCGTTGGGGGGATGCTCTGTTTGAAGCGATGATTCTGAAGTGGAAGAGATTGAAGTGTCCTTTCAAAGACTGGTGGGCGCCGATGATCGATGAGGGGGATGAGGAGTCGGTGGAGTGTCCGAGTTGTTGGAGAATGTTCTGCGCTCAGTGTAAAGTGGGATGGCATGGGGAAATGGAATGCGGAGAATTTGAGAAACTGCGGAAGGAGGCAGGAGGAAGTGTAGACAGAGACGACGTGATGAGGATGAAACTGGCGGATAAAAAGCAAATGGAAGAGATGCCCTAA

Protein sequence

MDAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEPEMCGGLVPKELLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVECPSCWRMFCAQCKVGWHGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP

Homology

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BLAST of Cla97C07G141190 vs. NCBI nr
Match: XP_008460341.1 (PREDICTED: E3 ubiquitin-protein ligase RNF144B-like [Cucumis melo] >KAA0053550.1 E3 ubiquitin-protein ligase RNF144B-like protein [Cucumis melo var. makuwa] >TYK19145.1 E3 ubiquitin-protein ligase RNF144B-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAKS S+MFTNR+C+HTFCTDCIS+HIAAKLE TMA KCP        EPEMCG  VPK 
Sbjct: 61  DAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMAVKCPEPNCGTVLEPEMCGSFVPKR 120

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERW DALFEAMILK KRL CPFKD  A MIDEGDEE   +VEC SCWR+FCA+C+VGW
Sbjct: 121 VLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEGVTAVECGSCWRLFCAECRVGW 180

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HGEM+CGEF++LRKEAG S D+DD M +KLA+ K+    P
Sbjct: 181 HGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCP 220

[Close]

BLAST of Cla97C07G141190 vs. NCBI nr
Match: XP_004144476.2 (probable E3 ubiquitin-protein ligase RNF144A [Cucumis sativus] >KGN58470.1 hypothetical protein Csa_001774 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 109/160 (68.12%), Postives = 124/160 (77.50%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAKS S+MFTNR+C+HTFCT CIS HIAAKLE  MA KCP        EPEMCG  VPK 
Sbjct: 61  DAKSHSQMFTNRVCTHTFCTACISNHIAAKLEVAMAVKCPEPNCGTVLEPEMCGSFVPKR 120

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERW DALFEAMILKWKRL CPFKD  A +IDEG EE   +VEC SCWR+FCA+C+VGW
Sbjct: 121 VLERWADALFEAMILKWKRLNCPFKDCGAAIIDEGGEEGVTAVECGSCWRLFCAECRVGW 180

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HGEMECGEF++LRKEAG S D+DD M +KLA+ K+    P
Sbjct: 181 HGEMECGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCP 220

[Close]

BLAST of Cla97C07G141190 vs. NCBI nr
Match: XP_038889081.1 (probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida])

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAK ASEMFTN +CSHTFCTDCIS++IAAKLE++MA KCP        EPEMC   +PKE
Sbjct: 66  DAKLASEMFTNGLCSHTFCTDCISKYIAAKLEDSMAVKCPQPKCGTLLEPEMCRSFIPKE 125

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERWGDALFEAMILKWKRL CPFKD  APMI EGDE+   +VEC +CWR+FCAQCKVGW
Sbjct: 126 VLERWGDALFEAMILKWKRLNCPFKDCSAPMIYEGDEKGVTAVECLNCWRLFCAQCKVGW 185

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HG+MEC EFEK+RKE     + +D+M MKLAD+K+ ++ P
Sbjct: 186 HGDMECREFEKVRKE-----NTEDMMTMKLADEKKWKKCP 220

[Close]

BLAST of Cla97C07G141190 vs. NCBI nr
Match: KAG6581788.1 (putative E3 ubiquitin-protein ligase ARI5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.2 bits (544), Expect = 7.9e-52
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           D KSASEMFT+  CSHTFC DCIS+HIAAKLE++MA KCP        EPEMC   VPKE
Sbjct: 79  DTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKE 138

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVECPSCWRMFCAQCKVGWHGE 121
           +LERWGDAL +AM+LKWK + CPFKD  A M+DE D E+VECP CWRMFCA+C VGWHG+
Sbjct: 139 VLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPECWRMFCAKCGVGWHGD 198

Query: 122 MECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           M C EF++L K   G VDR++ M MKLAD+++ +  P
Sbjct: 199 MNCTEFQRLLK--NGGVDREEEMTMKLADERKWKRCP 233

[Close]

BLAST of Cla97C07G141190 vs. NCBI nr
Match: XP_022956145.1 (probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata])

HSP 1 Score: 214.2 bits (544), Expect = 7.9e-52
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           D KSASEMFT+  CSHTFC DCIS+HIAAKLE++MA KCP        EPEMC   VPKE
Sbjct: 79  DTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKE 138

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVECPSCWRMFCAQCKVGWHGE 121
           +LERWGDAL +AM+LKWK + CPFKD  A M+DE D E+VECP CWRMFCA+C VGWHG+
Sbjct: 139 VLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPKCWRMFCAKCGVGWHGD 198

Query: 122 MECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           M C EF++L K   G VDR++ M MKLAD+++ +  P
Sbjct: 199 MNCTEFQRLLK--NGGVDREEEMTMKLADERKWKRCP 233

[Close]

BLAST of Cla97C07G141190 vs. ExPASy Swiss-Prot
Match: Q7Z419 (E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens OX=9606 GN=RNF144B PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-07
Identity = 37/136 (27.21%), Postives = 56/136 (41.18%), Query Frame = 0


Query: 4   KSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEPEM------------CGGLVP 63
           +S  +M T + C   FCT C+ +++   + E   +    P+M               LVP
Sbjct: 37  QSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVP 96

Query: 64  KELLERWGDALFEAMI-LKWKRLKCPFKDWW----APMIDEGDEESVECPSCWRMFCAQC 123
            +  + +    FE  + L   R  CP  D          D G    VECPSC   FC+ C
Sbjct: 97  VDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPSCHLKFCSCC 156

[Close]

BLAST of Cla97C07G141190 vs. ExPASy Swiss-Prot
Match: A5PK27 (E3 ubiquitin-protein ligase RNF144B OS=Bos taurus OX=9913 GN=RNF144B PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 37/130 (28.46%), Postives = 53/130 (40.77%), Query Frame = 0


Query: 4   KSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEPEM------------CGGLVP 63
           +S  +M T + C   FCT C+ +++   + E   +    P+M               LVP
Sbjct: 38  QSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVP 97

Query: 64  KELLERWGDALFEAMI-LKWKRLKCPFKDWW----APMIDEGDEESVECPSCWRMFCAQC 117
            +  + +    FE  + L   R  CP  D          D G    VECPSC   FC+ C
Sbjct: 98  VDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVECPSCHLKFCSCC 157

[Close]

BLAST of Cla97C07G141190 vs. ExPASy Swiss-Prot
Match: Q8BKD6 (E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 3.1e-06
Identity = 38/147 (25.85%), Postives = 56/147 (38.10%), Query Frame = 0


Query: 4   KSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEPEM------------CGGLVP 63
           +S  +M   + C   FCT C+ +++   + E   +    P+M               LVP
Sbjct: 37  QSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQETEIACLVP 96

Query: 64  KELLERWGDALFEAMI-LKWKRLKCPFKDWWA----PMIDEGDEESVECPSCWRMFCAQC 123
            +  + +    FE  + +   R  CP  D          D G    VECPSC   FC+ C
Sbjct: 97  LDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECPSCHLKFCSCC 156

Query: 124 KVGWHGEMECGEFEKLRKEAGGSVDRD 134
           K  WH E  C + +    E G     D
Sbjct: 157 KDAWHEESSCRDSQSAMPEHGALFGTD 183

[Close]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL
Match: A0A5A7UED3 (E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00700 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAKS S+MFTNR+C+HTFCTDCIS+HIAAKLE TMA KCP        EPEMCG  VPK 
Sbjct: 61  DAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMAVKCPEPNCGTVLEPEMCGSFVPKR 120

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERW DALFEAMILK KRL CPFKD  A MIDEGDEE   +VEC SCWR+FCA+C+VGW
Sbjct: 121 VLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEGVTAVECGSCWRLFCAECRVGW 180

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HGEM+CGEF++LRKEAG S D+DD M +KLA+ K+    P
Sbjct: 181 HGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCP 220

[Close]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL
Match: A0A1S3CDI0 (E3 ubiquitin-protein ligase RNF144B-like OS=Cucumis melo OX=3656 GN=LOC103499194 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAKS S+MFTNR+C+HTFCTDCIS+HIAAKLE TMA KCP        EPEMCG  VPK 
Sbjct: 61  DAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMAVKCPEPNCGTVLEPEMCGSFVPKR 120

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERW DALFEAMILK KRL CPFKD  A MIDEGDEE   +VEC SCWR+FCA+C+VGW
Sbjct: 121 VLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEGVTAVECGSCWRLFCAECRVGW 180

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HGEM+CGEF++LRKEAG S D+DD M +KLA+ K+    P
Sbjct: 181 HGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCP 220

[Close]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL
Match: A0A0A0L952 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646570 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.0e-57
Identity = 109/160 (68.12%), Postives = 124/160 (77.50%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           DAKS S+MFTNR+C+HTFCT CIS HIAAKLE  MA KCP        EPEMCG  VPK 
Sbjct: 61  DAKSHSQMFTNRVCTHTFCTACISNHIAAKLEVAMAVKCPEPNCGTVLEPEMCGSFVPKR 120

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEE---SVECPSCWRMFCAQCKVGW 121
           +LERW DALFEAMILKWKRL CPFKD  A +IDEG EE   +VEC SCWR+FCA+C+VGW
Sbjct: 121 VLERWADALFEAMILKWKRLNCPFKDCGAAIIDEGGEEGVTAVECGSCWRLFCAECRVGW 180

Query: 122 HGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           HGEMECGEF++LRKEAG S D+DD M +KLA+ K+    P
Sbjct: 181 HGEMECGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCP 220

[Close]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL
Match: A0A6J1GX07 (probable E3 ubiquitin-protein ligase ARI10 OS=Cucurbita moschata OX=3662 GN=LOC111457924 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.8e-52
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCP--------EPEMCGGLVPKE 61
           D KSASEMFT+  CSHTFC DCIS+HIAAKLE++MA KCP        EPEMC   VPKE
Sbjct: 79  DTKSASEMFTSTGCSHTFCADCISKHIAAKLEDSMAVKCPEPKCAAVLEPEMCDSFVPKE 138

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVECPSCWRMFCAQCKVGWHGE 121
           +LERWGDAL +AM+LKWK + CPFKD  A M+DE D E+VECP CWRMFCA+C VGWHG+
Sbjct: 139 VLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDMEAVECPKCWRMFCAKCGVGWHGD 198

Query: 122 MECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           M C EF++L K   G VDR++ M MKLAD+++ +  P
Sbjct: 199 MNCTEFQRLLK--NGGVDREEEMTMKLADERKWKRCP 233

[Close]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL
Match: A0A6J1IU95 (probable E3 ubiquitin-protein ligase ARI5 OS=Cucurbita maxima OX=3661 GN=LOC111479983 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50
Identity = 96/157 (61.15%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPE--------PEMCGGLVPKE 61
           D KSASEMFT+  CSHTFC DCIS+HIAAKL +++A KCPE        PEMC   VPKE
Sbjct: 78  DTKSASEMFTSTGCSHTFCADCISKHIAAKLVDSLAVKCPEPKCAAVLKPEMCDSFVPKE 137

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVECPSCWRMFCAQCKVGWHGE 121
           +LERWGDAL +AM+LKWK + CPFKD  A M+DE D E+VECP CWRMFCA+C VGWH +
Sbjct: 138 VLERWGDALLKAMLLKWKMVYCPFKDCSAGMVDEEDREAVECPKCWRMFCAKCGVGWHAD 197

Query: 122 MECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           M C EF++L K   G VDR++ M MKLAD+++ +  P
Sbjct: 198 MNCTEFQRLLK--NGGVDREEEMTMKLADERKWKRCP 232

[Close]

BLAST of Cla97C07G141190 vs. TAIR 10
Match: AT3G53690.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-30
Identity = 65/162 (40.12%), Postives = 97/162 (59.88%), Query Frame = 0


Query: 1   MDAKSASEMFTNRICSHTFCTDCISRHIAAKLEET-MAAKCP--------EPEMCGGLVP 60
           +D+KS  E F    CSH +C DC+S++IAAKL++  ++ +CP        EP+ C  ++P
Sbjct: 119 VDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQILP 178

Query: 61  KELLERWGDALFEAMILKWKRLKCPFKDWWAPMIDEGDE---ESVECPSCWRMFCAQCKV 120
           KE+ +RWGDAL EA++++ K+  CP+KD  A +  E  E   +  ECP C RM C +C  
Sbjct: 179 KEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKDSECPHCHRMVCVECGT 238

Query: 121 GWHGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
            WH EM C EF+KL     G   RDD++   +A +K+ +  P
Sbjct: 239 QWHPEMTCEEFQKLAANERG---RDDILLATMAKQKKWKRCP 277

[Close]

BLAST of Cla97C07G141190 vs. TAIR 10
Match: AT3G14250.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-29
Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 1   MDAKSASEMFTNRI-CSHTFCTDCISRHIAAKLEETMA-AKCP--------EPEMCGGLV 60
           MD K +S++F     C+H +CTDC  R++A K++E  +  KCP        EP  C  L+
Sbjct: 99  MDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEPYTCRDLI 158

Query: 61  PKELLERWGDALFEAMILKWKRLKCPFKDWWAPMI--DEGDEE--SVECPSCWRMFCAQC 120
           PK++ +RW   L E++I  W +  CPFKD  A M+  + GD      EC SC R+FC QC
Sbjct: 159 PKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDANVTQTECRSCHRLFCVQC 218

Query: 121 KVGWHGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEEMP 151
           KV WH  + C EF++       S D DD + +++A  KQ    P
Sbjct: 219 KVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCP 262

[Close]

BLAST of Cla97C07G141190 vs. TAIR 10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 52/164 (31.71%), Postives = 70/164 (42.68%), Query Frame = 0


Query: 6   ASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEP--------EMCGGLVPKELLER 65
           A  MF+   C H FC  C+ +H+  KL   MA KCP          + CG L+  +L + 
Sbjct: 310 AEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAPKCPHDGCKSELVIDACGKLLTPKLSKL 369

Query: 66  WGDALFEAMILKWKRLKCPFKDWWAPMIDEGDEESVE-------------CPSCWRMFCA 125
           W   L E  I   +R+ CP+    A M      ES +             C  C  +FC 
Sbjct: 370 WQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECRGLFCV 429

Query: 126 QCKVGWHGEMECGEFEKLRKEAGGSVDRDDVMRMKLADKKQMEE 149
            CKV WHG + C E++KL  E       DDV    LA+ K   +
Sbjct: 430 DCKVPWHGNLSCTEYKKLHPEP----PADDVKLKSLANNKMWRQ 469

[Close]

BLAST of Cla97C07G141190 vs. TAIR 10
Match: AT3G45540.1 (RING/U-box protein with C6HC-type zinc finger )

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14
Identity = 41/136 (30.15%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 2   DAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEPEM--------CGGLVPKE 61
           D  + ++MF    C H FC+DC+ RHI  +L E    +CP            C  L+  +
Sbjct: 106 DDINENQMFCVGKCRHRFCSDCMRRHIEVRLLEGSVMRCPHYRCKTTLKFGGCINLLTPK 165

Query: 62  LLERWGDALFEAMILKWKRLKCPFKDWWAPMID-------EGDEESVECPSCWRMFCAQC 121
           + E W   + E +I    R+ CP     A M +       + DE    C  C ++FC +C
Sbjct: 166 IREMWQQRIKEDLIPVTGRIYCPNSRCSALMSETELSISTKEDEVRRCCFKCGQIFCIKC 225

Query: 122 KVGWHGEMECGEFEKL 123
           KV WH  + C +++KL
Sbjct: 226 KVSWHSNLSCNDYKKL 241

[Close]

BLAST of Cla97C07G141190 vs. TAIR 10
Match: AT3G45510.1 (RING/U-box protein )

HSP 1 Score: 75.1 bits (183), Expect = 5.4e-14
Identity = 41/144 (28.47%), Postives = 60/144 (41.67%), Query Frame = 0


Query: 1   MDAKSASEMFTNRICSHTFCTDCISRHIAAKLEETMAAKCPEP--------EMCGGLVPK 60
           +D     EMF+  +CSH FC +C+ + I   L E    +CP            C  L+  
Sbjct: 71  VDDIEGQEMFSAALCSHYFCVECMKQRIEVSLNEGGVPRCPRHGCKSALTLRSCDHLLTP 130

Query: 61  ELLERWGDALFEAMILKWKRLKCPFKDWWAPM----IDEGDEESVE--CPSCWRMFCAQC 120
           +  E W   + E  I    R  CP    WA M    + E  ++ V   C  C + FC  C
Sbjct: 131 KQREMWEQRIKEESIPVCNRFHCPNPKCWALMSKTELTESTDDGVRRCCSKCRKPFCIDC 190

Query: 121 KVGWHGEMECGEFEKLRKEAGGSV 131
            V WH  + C E++    +A  +V
Sbjct: 191 NVSWHSNLSCKEYKMKGNKATTTV 214

The following BLAST results are available for this feature:

BLAST of Cla97C07G141190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460341.1	2.5e-58	69.38	PREDICTED: E3 ubiquitin-protein ligase RNF144B-like [Cucumis melo] >KAA0053550.1...	[more]
XP_004144476.2	2.2e-57	68.13	probable E3 ubiquitin-protein ligase RNF144A [Cucumis sativus] >KGN58470.1 hypot...	[more]
XP_038889081.1	2.0e-55	67.50	probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida]	[more]
KAG6581788.1	7.9e-52	63.06	putative E3 ubiquitin-protein ligase ARI5, partial [Cucurbita argyrosperma subsp...	[more]
XP_022956145.1	7.9e-52	63.06	probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]	[more]

BLAST of Cla97C07G141190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Z419	3.6e-07	27.21	E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens OX=9606 GN=RNF144B PE=1 SV=1	[more]
A5PK27	1.1e-06	28.46	E3 ubiquitin-protein ligase RNF144B OS=Bos taurus OX=9913 GN=RNF144B PE=2 SV=1	[more]
Q8BKD6	3.1e-06	25.85	E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=...	[more]

BLAST of Cla97C07G141190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UED3	1.2e-58	69.38	E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CDI0	1.2e-58	69.38	E3 ubiquitin-protein ligase RNF144B-like OS=Cucumis melo OX=3656 GN=LOC103499194...	[more]
A0A0A0L952	1.0e-57	68.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646570 PE=3 SV=1	[more]
A0A6J1GX07	3.8e-52	63.06	probable E3 ubiquitin-protein ligase ARI10 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IU95	1.6e-50	61.15	probable E3 ubiquitin-protein ligase ARI5 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cla97C07G141190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53690.1	1.8e-30	40.12	RING/U-box superfamily protein	[more]
AT3G14250.1	4.5e-29	38.41	RING/U-box superfamily protein	[more]
AT5G60250.1	1.5e-16	31.71	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G45540.1	4.1e-14	30.15	RING/U-box protein with C6HC-type zinc finger	[more]
AT3G45510.1	5.4e-14	28.47	RING/U-box protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 56..116 e-value: 1.9E-9 score: 47.4
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 63..116 e-value: 3.7E-7 score: 30.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..76 e-value: 3.5E-11 score: 44.9
None	No IPR available	PANTHER	PTHR11685:SF350	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 1..148
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 60..121
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 3..65
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 1..148
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 15..24
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 1..150 score: 14.029032

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G141190.1	Cla97C07G141190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity