Cla97C07G129100 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C07G129100
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Phosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
Location	Cla97Chr07: 810712 .. 811068 (+)
RNA-Seq Expression	Cla97C07G129100
Synteny	Cla97C07G129100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTATTGTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATTGAGAAGAAGGAGAAGGAAGATCATAACATTCATAGGCTTTTTGTGTTACCTATTATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCCGGTGGTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTCCGCTCTCGTCCTTGACTTTGCTGCTCAAAGCTCTTGA

mRNA sequence

ATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTATTGTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATTGAGAAGAAGGAGAAGGAAGATCATAACATTCATAGGCTTTTTGTGTTACCTATTATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCCGGTGGTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTCCGCTCTCGTCCTTGACTTTGCTGCTCAAAGCTCTTGA

Coding sequence (CDS)

ATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTATTGTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATTGAGAAGAAGGAGAAGGAAGATCATAACATTCATAGGCTTTTTGTGTTACCTATTATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAACCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCCGGTGGTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTCCGCTCTCGTCCTTGACTTTGCTGCTCAAAGCTCTTGA

Protein sequence

MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVLQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHAPPAIPDSALVLDFAAQSS

Homology

[Close]

BLAST of Cla97C07G129100 vs. NCBI nr
Match: XP_022995941.1 (uncharacterized protein LOC111491306 [Cucurbita maxima])

HSP 1 Score: 127.9 bits (320), Expect = 5.9e-26
Identity = 79/120 (65.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQV 60
           MG+S+R   VF V LLFTILL +   MEA+RVM GEKW++ K+         FVLP IQV
Sbjct: 1   MGMSKRVSLVFFV-LLFTILLPNP--MEAARVMSGEKWMKAKQ------DMAFVLP-IQV 60

Query: 61  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAG--GHFVHAPPAIPDSALVLDFAAQSS 119
           LQRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVAG  G FV APPAI D A +   AAQSS
Sbjct: 61  LQRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIAS-AAQSS 109

[Close]

BLAST of Cla97C07G129100 vs. NCBI nr
Match: XP_022931191.1 (uncharacterized protein LOC111437447 [Cucurbita moschata])

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24
Identity = 77/120 (64.17%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQV 60
           MG+S+R   VF VL+L TILL +   MEA+RVM G KW++ K+         FVLP IQV
Sbjct: 1   MGMSKRVSLVFFVLML-TILLPNP--MEAARVMSGHKWMKAKQ------DIAFVLP-IQV 60

Query: 61  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAG--GHFVHAPPAIPDSALVLDFAAQSS 119
           LQRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVAG  G FV APPAI D A +   AAQSS
Sbjct: 61  LQRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIAS-AAQSS 109

[Close]

BLAST of Cla97C07G129100 vs. NCBI nr
Match: KAG6606390.1 (hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-23
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 16  LFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVLQRAPVPPSGRNPCT 75
           +FTILL +   MEA+RVM GEKW++ K+         FVLP IQVLQRAPVPPSGRNPC+
Sbjct: 1   MFTILLPNP--MEAARVMSGEKWMKAKQ------DIAFVLP-IQVLQRAPVPPSGRNPCS 60

Query: 76  NIPGQSNGRCTLQTMNVAGG--HFVHAPPAIPDSALVLDFAAQSS 119
            IPGQSNGRCTLQTMNVAGG   FV APPAI D A +   AAQSS
Sbjct: 61  TIPGQSNGRCTLQTMNVAGGPARFVQAPPAIHDPAPIAS-AAQSS 95

[Close]

BLAST of Cla97C07G129100 vs. NCBI nr
Match: XP_002319090.1 (uncharacterized protein LOC7487687 [Populus trichocarpa] >PNT06657.1 hypothetical protein POPTR_013G043600 [Populus trichocarpa])

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 4   SQRDCFVFNVLLLFTILLAS-SQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVLQ 63
           SQR      V++  TI+L S SQ + A+R ++GE+W EK            ++  IQ LQ
Sbjct: 3   SQRRNQCLTVMIFVTIVLGSCSQQVLAARPLEGERWSEK------------IVGNIQSLQ 62

Query: 64  RAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHAPPAIPDSALVLDFAAQSS 119
           R PVPPSG +PCT+IPG+ +G+C+L  MN AG     APPA PD+  +++F A +S
Sbjct: 63  RGPVPPSGGSPCTHIPGRGSGKCSLGEMNFAGHTVALAPPAFPDA--IMNFGAAAS 104

[Close]

BLAST of Cla97C07G129100 vs. NCBI nr
Match: TKR71308.1 (hypothetical protein D5086_0000302190 [Populus alba])

HSP 1 Score: 84.0 bits (206), Expect = 9.8e-13
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 4   SQRDCFVFNVLLLFTILL--ASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVL 63
           SQR      V++  TI+L   S QV+ A  +M+GE+W EK            ++  IQ L
Sbjct: 3   SQRRNQCVTVMIFVTIVLGSCSEQVLAARPLMEGERWSEK------------IVGNIQSL 62

Query: 64  QRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHAPPAIPDSALVLDFAAQSS 119
           QR PVPPS  +PCT+IPG+ +G+CTL   N AG     APPA PD+ +  D AA ++
Sbjct: 63  QRGPVPPSTGSPCTHIPGRGSGKCTLGERNFAGHTVALAPPAFPDAIMNFDAAASTT 107

[Close]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL
Match: A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 89/119 (74.79%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQV 60
           MGISQ+     NVLL F IL+ASSQVM  +RVMK EKW+ K+EK DH++   FVLPIIQV
Sbjct: 1   MGISQK-----NVLLFFIILVASSQVMVGARVMKVEKWM-KEEKNDHSV---FVLPIIQV 60

Query: 61  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHA-PPAIPDSALVLDFAAQSS 119
           LQRAPVPPSGRNPCT IPGQSNGRCTLQTMNVAG HFVHA PP IPDSAL +D  AQSS
Sbjct: 61  LQRAPVPPSGRNPCTGIPGQSNGRCTLQTMNVAGHHFVHARPPPIPDSALNVDSTAQSS 110

[Close]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL
Match: A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.9e-26
Identity = 79/120 (65.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQV 60
           MG+S+R   VF V LLFTILL +   MEA+RVM GEKW++ K+         FVLP IQV
Sbjct: 1   MGMSKRVSLVFFV-LLFTILLPNP--MEAARVMSGEKWMKAKQ------DMAFVLP-IQV 60

Query: 61  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAG--GHFVHAPPAIPDSALVLDFAAQSS 119
           LQRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVAG  G FV APPAI D A +   AAQSS
Sbjct: 61  LQRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIAS-AAQSS 109

[Close]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL
Match: A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.0e-25
Identity = 77/120 (64.17%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MGISQRDCFVFNVLLLFTILLASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQV 60
           MG+S+R   VF VL+L TILL +   MEA+RVM G KW++ K+         FVLP IQV
Sbjct: 1   MGMSKRVSLVFFVLML-TILLPNP--MEAARVMSGHKWMKAKQ------DIAFVLP-IQV 60

Query: 61  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAG--GHFVHAPPAIPDSALVLDFAAQSS 119
           LQRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVAG  G FV APPAI D A +   AAQSS
Sbjct: 61  LQRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPAPIAS-AAQSS 109

[Close]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL
Match: B9I5L3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 4   SQRDCFVFNVLLLFTILLAS-SQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVLQ 63
           SQR      V++  TI+L S SQ + A+R ++GE+W EK            ++  IQ LQ
Sbjct: 3   SQRRNQCLTVMIFVTIVLGSCSQQVLAARPLEGERWSEK------------IVGNIQSLQ 62

Query: 64  RAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHAPPAIPDSALVLDFAAQSS 119
           R PVPPSG +PCT+IPG+ +G+C+L  MN AG     APPA PD+  +++F A +S
Sbjct: 63  RGPVPPSGGSPCTHIPGRGSGKCSLGEMNFAGHTVALAPPAFPDA--IMNFGAAAS 104

[Close]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL
Match: A0A4U5MP09 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000302190 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.7e-13
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 4   SQRDCFVFNVLLLFTILL--ASSQVMEASRVMKGEKWIEKKEKEDHNIHRLFVLPIIQVL 63
           SQR      V++  TI+L   S QV+ A  +M+GE+W EK            ++  IQ L
Sbjct: 3   SQRRNQCVTVMIFVTIVLGSCSEQVLAARPLMEGERWSEK------------IVGNIQSL 62

Query: 64  QRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGHFVHAPPAIPDSALVLDFAAQSS 119
           QR PVPPS  +PCT+IPG+ +G+CTL   N AG     APPA PD+ +  D AA ++
Sbjct: 63  QRGPVPPSTGSPCTHIPGRGSGKCTLGERNFAGHTVALAPPAFPDAIMNFDAAASTT 107

The following BLAST results are available for this feature:

BLAST of Cla97C07G129100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995941.1	5.9e-26	65.83	uncharacterized protein LOC111491306 [Cucurbita maxima]	[more]
XP_022931191.1	1.5e-24	64.17	uncharacterized protein LOC111437447 [Cucurbita moschata]	[more]
KAG6606390.1	4.7e-23	66.67	hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_002319090.1	2.6e-13	43.10	uncharacterized protein LOC7487687 [Populus trichocarpa] >PNT06657.1 hypothetica...	[more]
TKR71308.1	9.8e-13	41.88	hypothetical protein D5086_0000302190 [Populus alba]	[more]

BLAST of Cla97C07G129100 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCX8	1.8e-36	74.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1	[more]
A0A6J1K3A7	2.9e-26	65.83	uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306...	[more]
A0A6J1ET04	7.0e-25	64.17	uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
B9I5L3	1.2e-13	43.10	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 ...	[more]
A0A4U5MP09	4.7e-13	41.88	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000302190 PE=4 SV=1	[more]

BLAST of Cla97C07G129100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33592	FAMILY NOT NAMED	coord: 1..112
None	No IPR available	PANTHER	PTHR33592:SF5	TRANSMEMBRANE PROTEIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G129100.1	Cla97C07G129100.1	mRNA