Cla97C06G118990 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G118990
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	ATP synthase subunit a
Location	Cla97Chr06: 14294525 .. 14295010 (-)
RNA-Seq Expression	Cla97C06G118990
Synteny	Cla97C06G118990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGGTCTCTAATTTTCTCTTTTTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCTCAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATAGGAGATCCTGGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

mRNA sequence

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCTCAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATAGGAGATCCTGGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Coding sequence (CDS)

ATGTCTGTCACTTTTACATTTTCATTATTTTGCAATCCCTTGGGTATGCTACCTTATAGCTTCATAGTTTCAAGTCATTTTCTTATTACTTTAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCTCAGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGGGCTAATCCCTTATTATTTTCGTGCATTTAGCTCAGGAATACGTTTAGTTACCAATGTGATGGTCGATCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATAATCTTTTCTATTTCATAGGAGATCCTGGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATATCACAAGCTCATGTTTCTACAATCTCAAGATGTATTTACTTGAATGATGTTATTACCAATTAG

Protein sequence

MSVTFTFSLFCNPLGMLPYSFIVSSHFLITLVGFQRNGLHFLSFSLPSGVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVITN

Homology

[Close]

BLAST of Cla97C06G118990 vs. NCBI nr
Match: YP_009430479.1 (ATP synthase subunit 6 [Solanum lycopersicum] >ATD51584.1 ATP synthase subunit 6 [Solanum lycopersicum] >ATD51585.1 ATP synthase subunit 6 [Solanum lycopersicum])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 272 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 331

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 332 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 391

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 392 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 430

[Close]

BLAST of Cla97C06G118990 vs. NCBI nr
Match: ATY70550.1 (Atp6, partial [Solanum commersonii] >ATY70557.1 Atp6, partial [Solanum commersonii])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 275 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 334

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 335 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 394

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 395 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 433

[Close]

BLAST of Cla97C06G118990 vs. NCBI nr
Match: AUS83467.1 (Atp6, partial [Solanum tuberosum])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 253 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 312

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 313 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 372

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 373 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 411

[Close]

BLAST of Cla97C06G118990 vs. NCBI nr
Match: YP_009919617.1 (ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97361.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97688.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97784.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97883.1 ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97988.1 ATP synthase subunit 6 [Solanum aethiopicum])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 198 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQKNGLHFLSFLLPA 257

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 258 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 317

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 318 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 356

[Close]

BLAST of Cla97C06G118990 vs. NCBI nr
Match: AAD20262.1 (ATP synthase subunit 6 [Solanum tuberosum] >QPF97161.1 ATP synthase subunit 6 [Solanum ahanhuiri] >QPF97476.1 ATP synthase subunit 6 [Solanum tuberosum subsp. andigenum] >QPF97621.1 ATP synthase subunit 6 [Solanum x juzepczukii] >QPF97694.1 ATP synthase subunit 6 [Solanum chaucha])

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 334 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 372

[Close]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot
Match: P05499 (ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60
Identity = 124/159 (77.99%), Postives = 131/159 (82.39%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 221 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 280

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+L YFI
Sbjct: 281 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFI 340

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 341 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 379

[Close]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot
Match: Q04654 (ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.8e-57
Identity = 120/155 (77.42%), Postives = 125/155 (80.65%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPSGV 62
           VTFTF LFCN  GM+PYSF V+SHFLITL            VGFQRNGLHFLSF LP+GV
Sbjct: 123 VTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGV 182

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGD 122
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN+L YFIGD
Sbjct: 183 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLLYFIGD 242

Query: 123 PGPLFIVLALTGLELGVAISQAHVSTISRCIYLND 146
            GPLFIVLALTG ELGVAISQAHVSTIS CIYLND
Sbjct: 243 LGPLFIVLALTGPELGVAISQAHVSTISICIYLND 277

[Close]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot
Match: P68526 (ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.5e-57
Identity = 119/157 (75.80%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL            VGFQR+GLHF SF LP+
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLND 146
           GD GPLFIVLALTGLELGVAISQAHVSTIS CIYLND
Sbjct: 338 GDLGPLFIVLALTGLELGVAISQAHVSTISICIYLND 374

[Close]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot
Match: P68527 (ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.5e-57
Identity = 119/157 (75.80%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLF NP GM+P+SF V+SHFLITL            VGFQR+GLHF SF LP+
Sbjct: 218 ISVTFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPA 277

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTML +NN+FYFI
Sbjct: 278 GVPLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFI 337

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLND 146
           GD GPLFIVLALTGLELGVAISQAHVSTIS CIYLND
Sbjct: 338 GDLGPLFIVLALTGLELGVAISQAHVSTISICIYLND 374

[Close]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot
Match: P05500 (ATP synthase subunit a OS=Oenothera berteroana OX=3950 GN=ATP6 PE=2 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 4.2e-56
Identity = 119/157 (75.80%), Postives = 125/157 (79.62%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPSGV 62
           VTFTF LFCN  GM+PYSF V+SHFLITL            VGFQRNGLHFLSF LP+GV
Sbjct: 122 VTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGV 181

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGD 122
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN+LFYFIGD
Sbjct: 182 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLFYFIGD 241

Query: 123 PGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
            GPLFIVLALTGLELGVAI QA+V TI  CIYLND I
Sbjct: 242 LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 278

[Close]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL
Match: A0A290WL00 (ATP synthase subunit a OS=Solanum lycopersicum OX=4081 GN=atp6 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 272 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 331

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 332 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 391

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 392 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 430

[Close]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL
Match: A0A7S9DFY2 (ATP synthase subunit 6 OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=atp6 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 334 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 372

[Close]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL
Match: A0A2H4T3Q7 (ATP synthase subunit a (Fragment) OS=Solanum commersonii OX=4109 GN=atp6 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 275 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 334

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 335 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 394

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 395 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 433

[Close]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL
Match: A0A7S9DGW1 (ATP synthase subunit 6 OS=Solanum tuberosum subsp. andigenum OX=80418 GN=atp6 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 334 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 372

[Close]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL
Match: Q9TGX4 (ATP synthase subunit a OS=Solanum tuberosum OX=4113 GN=atp6 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 125/159 (78.62%), Postives = 132/159 (83.02%), Query Frame = 0


Query: 1   MSVTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPS 60
           +SVTFTFSLFCNP GM+PYSF V+SHFLITL            VGFQ+NGLHFLSF LP+
Sbjct: 214 ISVTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPA 273

Query: 61  GVPLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFI 120
           GVPLPLAPFLVLL LIPY FRA SSGIRL  N+M  HS VKILSGFAWTMLCMN+LFYFI
Sbjct: 274 GVPLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFI 333

Query: 121 GDPGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
           GD GPLFIVLALTGLELGVAISQAHVSTI  CIYLND I
Sbjct: 334 GDLGPLFIVLALTGLELGVAISQAHVSTILICIYLNDAI 372

[Close]

BLAST of Cla97C06G118990 vs. TAIR 10
Match: AT2G07741.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-54
Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPSGV 62
           VTF F LFCN  GM+PYSF V+SHFLITL            VGFQR+GLHF SF LP+GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGD 122
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFIG 
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

Query: 123 PGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
            GPLFIVLALTGLELGVAI QA+V TI  CIYLND I
Sbjct: 346 LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 382

[Close]

BLAST of Cla97C06G118990 vs. TAIR 10
Match: ATMG01170.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-54
Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPSGV 62
           VTF F LFCN  GM+PYSF V+SHFLITL            VGFQR+GLHF SF LP+GV
Sbjct: 190 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 249

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGD 122
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFIG 
Sbjct: 250 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 309

Query: 123 PGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
            GPLFIVLALTGLELGVAI QA+V TI  CIYLND I
Sbjct: 310 LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 346

[Close]

BLAST of Cla97C06G118990 vs. TAIR 10
Match: ATMG00410.1 (ATPase subunit 6-1 )

HSP 1 Score: 209.1 bits (531), Expect = 2.4e-54
Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 3   VTFTFSLFCNPLGMLPYSFIVSSHFLITL------------VGFQRNGLHFLSFSLPSGV 62
           VTF F LFCN  GM+PYSF V+SHFLITL            VGFQR+GLHF SF LP+GV
Sbjct: 226 VTFLFLLFCNLQGMIPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGV 285

Query: 63  PLPLAPFLVLLGLIPYYFRAFSSGIRLVTNVMVDHSLVKILSGFAWTMLCMNNLFYFIGD 122
           PLPLAPFLVLL LI Y FRA S GIRL  N+M  HSLVKILSGFAWTMLCMN++FYFIG 
Sbjct: 286 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGA 345

Query: 123 PGPLFIVLALTGLELGVAISQAHVSTISRCIYLNDVI 148
            GPLFIVLALTGLELGVAI QA+V TI  CIYLND I
Sbjct: 346 LGPLFIVLALTGLELGVAILQAYVFTILICIYLNDAI 382

The following BLAST results are available for this feature:

BLAST of Cla97C06G118990 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009430479.1	2.5e-58	78.62	ATP synthase subunit 6 [Solanum lycopersicum] >ATD51584.1 ATP synthase subunit 6...	[more]
ATY70550.1	2.5e-58	78.62	Atp6, partial [Solanum commersonii] >ATY70557.1 Atp6, partial [Solanum commerson...	[more]
AUS83467.1	2.5e-58	78.62	Atp6, partial [Solanum tuberosum]	[more]
YP_009919617.1	2.5e-58	78.62	ATP synthase subunit 6 [Solanum aethiopicum] >QMQ97361.1 ATP synthase subunit 6 ...	[more]
AAD20262.1	2.5e-58	78.62	ATP synthase subunit 6 [Solanum tuberosum] >QPF97161.1 ATP synthase subunit 6 [S...	[more]

BLAST of Cla97C06G118990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05499	1.6e-60	77.99	ATP synthase subunit a OS=Nicotiana tabacum OX=4097 GN=ATP6 PE=3 SV=1	[more]
Q04654	3.8e-57	77.42	ATP synthase subunit a OS=Vicia faba OX=3906 GN=ATP6 PE=3 SV=1	[more]
P68526	8.5e-57	75.80	ATP synthase subunit a OS=Triticum timopheevii OX=4570 GN=ATP6 PE=3 SV=1	[more]
P68527	8.5e-57	75.80	ATP synthase subunit a OS=Triticum aestivum OX=4565 GN=ATP6 PE=3 SV=1	[more]
P05500	4.2e-56	75.80	ATP synthase subunit a OS=Oenothera berteroana OX=3950 GN=ATP6 PE=2 SV=2	[more]

BLAST of Cla97C06G118990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A290WL00	1.2e-58	78.62	ATP synthase subunit a OS=Solanum lycopersicum OX=4081 GN=atp6 PE=3 SV=1	[more]
A0A7S9DFY2	1.2e-58	78.62	ATP synthase subunit 6 OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=atp...	[more]
A0A2H4T3Q7	1.2e-58	78.62	ATP synthase subunit a (Fragment) OS=Solanum commersonii OX=4109 GN=atp6 PE=3 SV...	[more]
A0A7S9DGW1	1.2e-58	78.62	ATP synthase subunit 6 OS=Solanum tuberosum subsp. andigenum OX=80418 GN=atp6 PE...	[more]
Q9TGX4	1.2e-58	78.62	ATP synthase subunit a OS=Solanum tuberosum OX=4113 GN=atp6 PE=3 SV=1	[more]

BLAST of Cla97C06G118990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07741.1	2.4e-54	72.61	ATPase, F0 complex, subunit A protein	[more]
ATMG01170.1	2.4e-54	72.61	ATPase, F0 complex, subunit A protein	[more]
ATMG00410.1	2.4e-54	72.61	ATPase subunit 6-1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATP synthase, F0 complex, subunit A	PRINTS	PR00123	ATPASEA	coord: 130..145 score: 40.45 coord: 49..64 score: 48.41 coord: 69..91 score: 36.44
IPR000568	ATP synthase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 4..143 e-value: 7.0E-12 score: 45.7
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220	ATP synthase, F0 complex, subunit A	coord: 20..149 e-value: 8.9E-14 score: 53.9
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 4..143
IPR045083	ATP synthase, F0 complex, subunit A, bacterial/mitochondria	PANTHER	PTHR11410	ATP SYNTHASE SUBUNIT A	coord: 2..147
None	No IPR available	CDD	cd00310	ATP-synt_Fo_a_6	coord: 5..144 e-value: 8.7517E-22 score: 83.2176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G118990.1	Cla97C06G118990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity