Cla97C06G118150 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G118150
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	anthranilate synthase beta subunit 1, chloroplastic-like
Location	Cla97Chr06: 11658167 .. 11658628 (+)
RNA-Seq Expression	Cla97C06G118150
Synteny	Cla97C06G118150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCTGCCAATGCAGTTCTGTTTGAAACCATCATTTTCTTGTGCGATATGGTTGCTATTACACAATCTTCTACATCTTTATGTTTGCCCAAAAGTTTGTGGTTCTCTAGAACATCAAAGGTCACCTGTAGAACTGGCCTATTTGTGCCCTCAGGTATTATTTTTTTTCATTTTTCTCCCGTGTTGTTGTCTTTGACTGTAATGGATATGTTTTTATTGCTTTACTTCTTTTTTGCAGATATTTGCTTGGCTGCCAAGAATCCAAAAAGATTTGTCTTGAATGCGTCAATTTTAGTTATTGAGTCAAATTCGAGGACTTCAAGTTCAAACAAGAAGACCCAGAATCCAATAATTGCCATTGACAACTATGATAGCTTCACCTACAATTTTTGTCAGGTTATTACTCGATTTTTTTTTAGAGTACAAAATGTGGCTAATACTTATTCTTATTTTTGCTGA

mRNA sequence

ATGTTGTCTGCCAATGCAGTTCTGTTTGAAACCATCATTTTCTTGTGCGATATGGTTGCTATTACACAATCTTCTACATCTTTATGTTTGCCCAAAAGTTTGTGGTTCTCTAGAACATCAAAGGTCACCTGTAGAACTGGCCTATTTGTGCCCTCAGATATTTGCTTGGCTGCCAAGAATCCAAAAAGATTTGTCTTGAATGCGTCAATTTTAGTTATTGAGTCAAATTCGAGGACTTCAAGTTCAAACAAGAAGACCCAGAATCCAATAATTGCCATTGACAACTATGATAGCTTCACCTACAATTTTTGTCAGGTTATTACTCGATTTTTTTTTAGAGTACAAAATGTGGCTAATACTTATTCTTATTTTTGCTGA

Coding sequence (CDS)

ATGTTGTCTGCCAATGCAGTTCTGTTTGAAACCATCATTTTCTTGTGCGATATGGTTGCTATTACACAATCTTCTACATCTTTATGTTTGCCCAAAAGTTTGTGGTTCTCTAGAACATCAAAGGTCACCTGTAGAACTGGCCTATTTGTGCCCTCAGATATTTGCTTGGCTGCCAAGAATCCAAAAAGATTTGTCTTGAATGCGTCAATTTTAGTTATTGAGTCAAATTCGAGGACTTCAAGTTCAAACAAGAAGACCCAGAATCCAATAATTGCCATTGACAACTATGATAGCTTCACCTACAATTTTTGTCAGGTTATTACTCGATTTTTTTTTAGAGTACAAAATGTGGCTAATACTTATTCTTATTTTTGCTGA

Protein sequence

MLSANAVLFETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRFFFRVQNVANTYSYFC

Homology

[Close]

BLAST of Cla97C06G118150 vs. NCBI nr
Match: XP_004142292.1 (anthranilate synthase beta subunit 2, chloroplastic [Cucumis sativus] >XP_011654495.1 anthranilate synthase beta subunit 2, chloroplastic [Cucumis sativus] >KGN49672.1 hypothetical protein Csa_018456 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 3.0e-28
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           MVAI  SS S CLPKSL FS+TSK  CRTG+ VPSDI LAA+NPKRFVLNAS+ V ESNS
Sbjct: 1   MVAIVPSSASFCLPKSLVFSKTSKGNCRTGIAVPSDIRLAARNPKRFVLNASVSVNESNS 60

Query: 78  RTSSSNKKTQNPIIAIDNYDSFTYNFCQVI 108
           RTSS NKKTQNPII IDNYDSFTYN CQ +
Sbjct: 61  RTSSLNKKTQNPIIVIDNYDSFTYNLCQYV 90

[Close]

BLAST of Cla97C06G118150 vs. NCBI nr
Match: XP_038893244.1 (anthranilate synthase beta subunit 2, chloroplastic-like [Benincasa hispida] >XP_038893245.1 anthranilate synthase beta subunit 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-26
Identity = 70/89 (78.65%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 19  VAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNSR 78
           V IT SS S CLPK L FS+TSKVTCRTGL  PSDI LAAKNPKRFVLNASI V ES SR
Sbjct: 4   VTITPSSASFCLPKRLLFSKTSKVTCRTGLSAPSDIRLAAKNPKRFVLNASISVNESTSR 63

Query: 79  TSSSNKKTQNPIIAIDNYDSFTYNFCQVI 108
           TSS N KTQNPII IDNYDSFTYN CQ +
Sbjct: 64  TSSLN-KTQNPIIFIDNYDSFTYNLCQYV 91

[Close]

BLAST of Cla97C06G118150 vs. NCBI nr
Match: XP_022943100.1 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 18  EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSARSHSLFVAKNPKAFVVNAS 77

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 78  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 124

[Close]

BLAST of Cla97C06G118150 vs. NCBI nr
Match: XP_022989805.1 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 6   EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSALSHSLFVAKNPKAFVVNAS 65

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 66  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 112

[Close]

BLAST of Cla97C06G118150 vs. NCBI nr
Match: XP_022989797.1 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 16  EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSALSHSLFVAKNPKAFVVNAS 75

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 76  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 122

[Close]

BLAST of Cla97C06G118150 vs. ExPASy Swiss-Prot
Match: Q9FJM5 (Anthranilate synthase beta subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASB2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           M A T  ++ L  PK  + +R    +    L  P+ + +  K+ +  +  ASI + ESNS
Sbjct: 1   MAATTLYNSCLLQPKYGFTTRRLNQSLVNSLTNPTRVSVLWKSRRDVIAKASIEMAESNS 60

Query: 78  RTSSSNKKTQNPIIAIDNYDSFTYNFCQ 106
             SS    +  PII IDNYDSFTYN CQ
Sbjct: 61  -ISSVVVNSSGPIIVIDNYDSFTYNLCQ 87

[Close]

BLAST of Cla97C06G118150 vs. ExPASy Swiss-Prot
Match: Q42565 (Anthranilate synthase beta subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ASB1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           M A T   + L  PKS   +R    +    L  P+ + +  K+ +     ASI + ESNS
Sbjct: 1   MAASTLYKSCLLQPKSGSTTRRLNPSLVNPLTNPTRVSVLGKSRRDVFAKASIEMAESNS 60

Query: 78  RTS--SSNKKTQNPIIAIDNYDSFTYNFCQ 106
             S   ++ K   PII IDNYDSFTYN CQ
Sbjct: 61  IPSVVVNSSKQHGPIIVIDNYDSFTYNLCQ 90

[Close]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL
Match: A0A0A0KMN8 (Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G056100 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 70/90 (77.78%), Postives = 75/90 (83.33%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           MVAI  SS S CLPKSL FS+TSK  CRTG+ VPSDI LAA+NPKRFVLNAS+ V ESNS
Sbjct: 1   MVAIVPSSASFCLPKSLVFSKTSKGNCRTGIAVPSDIRLAARNPKRFVLNASVSVNESNS 60

Query: 78  RTSSSNKKTQNPIIAIDNYDSFTYNFCQVI 108
           RTSS NKKTQNPII IDNYDSFTYN CQ +
Sbjct: 61  RTSSLNKKTQNPIIVIDNYDSFTYNLCQYV 90

[Close]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL
Match: A0A6J1FXD6 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447935 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.3e-23
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 18  EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSARSHSLFVAKNPKAFVVNAS 77

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 78  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 124

[Close]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL
Match: A0A6J1JND9 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486873 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 7.0e-23
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 6   EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSALSHSLFVAKNPKAFVVNAS 65

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 66  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 112

[Close]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL
Match: A0A6J1JGT4 (anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486873 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 7.0e-23
Identity = 69/107 (64.49%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  ETIIFLCDMVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNAS 69
           E IIFL +MVAIT SS S CLPK   FS+TSK T  TG    S     AKNPK FV+NAS
Sbjct: 16  EAIIFLRNMVAITPSSASFCLPKRSLFSKTSKTTRITGPSALSHSLFVAKNPKAFVVNAS 75

Query: 70  ILVIESNSRTSSSNKKTQNPIIAIDNYDSFTYNFCQVITRF--FFRV 115
           I V ESNSRTSS NKKT NPII IDNYDSFTYN CQ +     FF V
Sbjct: 76  ISVTESNSRTSSLNKKTLNPIIVIDNYDSFTYNLCQYMGELGCFFEV 122

[Close]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL
Match: A0A1S3BZE1 (anthranilate synthase beta subunit 1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495068 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 36  FSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNSRTSSSNKKTQNPIIAIDN 95
           FS+T K TCRTG++VPSDI LAA++PK FVLNAS+ V ESNSRTSS NKKTQNPII IDN
Sbjct: 2   FSKTLKGTCRTGIYVPSDIRLAARSPKSFVLNASVSVNESNSRTSSLNKKTQNPIIVIDN 61

Query: 96  YDSFTYNFCQVI 108
           YDSFTYN CQ +
Sbjct: 62  YDSFTYNLCQYV 73

[Close]

BLAST of Cla97C06G118150 vs. TAIR 10
Match: AT5G57890.1 (Glutamine amidotransferase type 1 family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           M A T  ++ L  PK  + +R    +    L  P+ + +  K+ +  +  ASI + ESNS
Sbjct: 1   MAATTLYNSCLLQPKYGFTTRRLNQSLVNSLTNPTRVSVLWKSRRDVIAKASIEMAESNS 60

Query: 78  RTSSSNKKTQNPIIAIDNYDSFTYNFCQ 106
             SS    +  PII IDNYDSFTYN CQ
Sbjct: 61  -ISSVVVNSSGPIIVIDNYDSFTYNLCQ 87

[Close]

BLAST of Cla97C06G118150 vs. TAIR 10
Match: AT1G25220.1 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           M A T   + L  PKS   +R    +    L  P+ + +  K+ +     ASI + ESNS
Sbjct: 1   MAASTLYKSCLLQPKSGSTTRRLNPSLVNPLTNPTRVSVLGKSRRDVFAKASIEMAESNS 60

Query: 78  RTS--SSNKKTQNPIIAIDNYDSFTYNFCQ 106
             S   ++ K   PII IDNYDSFTYN CQ
Sbjct: 61  IPSVVVNSSKQHGPIIVIDNYDSFTYNLCQ 90

[Close]

BLAST of Cla97C06G118150 vs. TAIR 10
Match: AT1G25220.2 (anthranilate synthase beta subunit 1 )

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06
Identity = 36/95 (37.89%), Postives = 47/95 (49.47%), Query Frame = 0


Query: 18  MVAITQSSTSLCLPKSLWFSRTSKVTCRTGLFVPSDICLAAKNPKRFVLNASILVIESNS 77
           M A T   + L  PKS   +R    +    L  P+ + +  K+ +     ASI + ESNS
Sbjct: 1   MAASTLYKSCLLQPKSGSTTRRLNPSLVNPLTNPTRVSVLGKSRRDVFAKASIEMAESNS 60

Query: 78  RTS--SSNKKTQNPIIAIDNYDSFTYNFCQVITRF 111
             S   ++ K   PII IDNYDSFTYN CQ    F
Sbjct: 61  IPSVVVNSSKQHGPIIVIDNYDSFTYNLCQYKQNF 95

The following BLAST results are available for this feature:

BLAST of Cla97C06G118150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142292.1	3.0e-28	77.78	anthranilate synthase beta subunit 2, chloroplastic [Cucumis sativus] >XP_011654...	[more]
XP_038893244.1	3.7e-26	78.65	anthranilate synthase beta subunit 2, chloroplastic-like [Benincasa hispida] >XP...	[more]
XP_022943100.1	1.1e-22	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 [Cucurbita m...	[more]
XP_022989805.1	1.4e-22	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X2 [Cucurbita m...	[more]
XP_022989797.1	1.4e-22	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 [Cucurbita m...	[more]

BLAST of Cla97C06G118150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJM5	2.8e-05	38.64	Anthranilate synthase beta subunit 2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q42565	3.7e-05	38.89	Anthranilate synthase beta subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cla97C06G118150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMN8	1.4e-28	77.78	Glutamine amidotransferase type-1 domain-containing protein OS=Cucumis sativus O...	[more]
A0A6J1FXD6	5.3e-23	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 OS=Cucurbita...	[more]
A0A6J1JND9	7.0e-23	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X2 OS=Cucurbita...	[more]
A0A6J1JGT4	7.0e-23	64.49	anthranilate synthase beta subunit 2, chloroplastic-like isoform X1 OS=Cucurbita...	[more]
A0A1S3BZE1	1.7e-21	76.39	anthranilate synthase beta subunit 1, chloroplastic-like OS=Cucumis melo OX=3656...	[more]

BLAST of Cla97C06G118150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57890.1	2.0e-06	38.64	Glutamine amidotransferase type 1 family protein	[more]
AT1G25220.1	2.6e-06	38.89	anthranilate synthase beta subunit 1	[more]
AT1G25220.2	2.6e-06	37.89	anthranilate synthase beta subunit 1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G118150.1	Cla97C06G118150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process