Cla97C06G116950 (gene) Watermelon (97103) v2.5

Overview
NameCla97C06G116950
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr06: 8386601 .. 8386876 (-)
RNA-Seq ExpressionCla97C06G116950
SyntenyCla97C06G116950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAAGCAATCCTGACCGTTCAAATGGCATACCTTCCACTCTCTGAAACCCTACTCCTTCAGCGAAAAGCACTCTTTTTTATTACCCTCAGATTCACCAAAACGCTCTCTCTCTCTCTTTCCCTCTCCTCCTTTCTCTCTCTTTCTTTCTTCAAGCCCCAGTCGGCTACAAACCCTCTTCCGAAATCCATAACCCAGAATCGAATTTCAATTTCCAGACAGGAAGAAAGAAATACGAGCCGAATCGATTTTTCCTCATTTGGGGTTTCTTGA

mRNA sequence

ATGATGAAAGCAATCCTGACCGTTCAAATGGCATACCTTCCACTCTCTGAAACCCTACTCCTTCAGCGAAAAGCACTCTTTTTTATTACCCTCAGATTCACCAAAACGCTCTCTCTCTCTCTTTCCCTCTCCTCCTTTCTCTCTCTTTCTTTCTTCAAGCCCCAGTCGGCTACAAACCCTCTTCCGAAATCCATAACCCAGAATCGAATTTCAATTTCCAGACAGGAAGAAAGAAATACGAGCCGAATCGATTTTTCCTCATTTGGGGTTTCTTGA

Coding sequence (CDS)

ATGATGAAAGCAATCCTGACCGTTCAAATGGCATACCTTCCACTCTCTGAAACCCTACTCCTTCAGCGAAAAGCACTCTTTTTTATTACCCTCAGATTCACCAAAACGCTCTCTCTCTCTCTTTCCCTCTCCTCCTTTCTCTCTCTTTCTTTCTTCAAGCCCCAGTCGGCTACAAACCCTCTTCCGAAATCCATAACCCAGAATCGAATTTCAATTTCCAGACAGGAAGAAAGAAATACGAGCCGAATCGATTTTTCCTCATTTGGGGTTTCTTGA

Protein sequence

MMKAILTVQMAYLPLSETLLLQRKALFFITLRFTKTLSLSLSLSSFLSLSFFKPQSATNPLPKSITQNRISISRQEERNTSRIDFSSFGVS
Homology
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BLAST of Cla97C06G116950 vs. ExPASy TrEMBL
Match: A0A0A0LLG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.6e-06
Identity = 52/95 (54.74%), Postives = 59/95 (62.11%), Query Frame = 0 

Query: 1  MMKAILTVQMAYLPLSETLLLQRKALFFITLRFTKTLSLSLSLS--SFLSLSFF------ 60
          MM+ ILTVQ AYLPLSETLLLQRK+  F   +  ++LSLSLSLS  SFLSLSFF      
Sbjct: 1  MMEPILTVQTAYLPLSETLLLQRKSTLFYYPQIHQSLSLSLSLSPPSFLSLSFFGAPVGY 60

Query: 61 KPQS-ATNPLPKSITQNRISISRQEERNTSRIDFS 87
          KP S   NP      + +ISI RQE   T    FS
Sbjct: 61 KPSSEIRNP------EIQISIFRQERNKTQSNRFS 89

The following BLAST results are available for this feature:
BLAST of Cla97C06G116950 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G116950 vs.
Match NameE-valueIdentityDescription
BLAST of Cla97C06G116950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLG69.6e-0654.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G171930 PE=4 SV=1[more]
BLAST of Cla97C06G116950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G116950.1Cla97C06G116950.1mRNA