Cla97C06G111455 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C06G111455
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Retrotran_gag_3 domain-containing protein
Location	Cla97Chr06: 2219877 .. 2223646 (+)
RNA-Seq Expression	Cla97C06G111455
Synteny	Cla97C06G111455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTTCCTGTCTTATTGGCATTTCTCAGAAGATAATGATGATCTTGGAGTTACTCGTTTATCAAAATCCGAATCTTCCTCTAGTTGGAAGATTGAATATGTGGTTTGGCCACCCACCGAGGACGTAAGTTGACCCAAGTGCCTAGGGAGATTCCAAAAGAGGACAACCTATCTTTTGAGAAATGTTAAAAGATTATGATGTAGTAGGTATTAGGGTAAATTGGGTTATCTAATCAAATTCTTAATTAAGATTAGGATTAGGATTAGTTTCTTTGGTTTATTAGGTTTAGGATTAATTTCCTTTCCAATTCTCTATAAATAGGATTAGGATTAGTTTCCTTTCCAATTCTTGATTGATTTTTGGTAGATTATTCGCCAATCTTCTCAATTCCAATTTTAGCTTTTCTACAGCTTGCTGCAGCCTGACCATTGAGGTCTGCGTTACTGTCATTTTATCCAGTAAATCACCCATTAAAGTTTACAAATGTCTTCGTTCACAGTTTGAGGAGATGTGGAGAAGGATGCTTCCACATCATGAGTTTGAAGGTTGGAAACCTTGTTGGTGTTCTTGATCACCATCAAGCCCTTTCACAAAGGCACTCTAATACCAAATTGATGTAGATTACGAATCTTGGAGAATTCTTGAAGGAAAGTCTTATTCATTCATTGGGGGAAAACTCCTATAGTGGATGCTTTGTCAATAGGATTGTTGGTGGCTAGAAAAAAGACTATTTTCTTATCTAACTACTCAAATTCGTTAGTGTTATCATGACCTTATGTAAGGTTTGATTATTGTACTGCCATGATCTTCCTAAAAGGATATGGCATATGTCCATATTGATAATATCATGTTGATTATTTTTTTTTATTTTTATTTTTTTATATTCTCCCTTTATATTTATTGTAAAGTTATTTGCTATATTTATTTTTTCCTTATTGTAATAGGTTTCCTTTTATTTAAGAAAACCCTTGTCTAACAAAGAAAATAAGAGAGAAATAAAATATTTTCAGCATGATATTAGAGCATATTGCTTGAAACCCTAATTTTTTTTTAAAAAAGAAACATAAACCCTAATTTGTCGCCACCGCGCTCCAGATCTTCGCCGGACGTCTCACCTCAGTCACCGGACAACGCCCAGCCTCCCAGTTGACGCCAGACCGCTGGTCGTTCGTGGATCCTGTGAGTGCAGAAGAAAGTCGCAAATCGCGTGCCCTAACCAACGCCGATGCCGACGCTGTTGTGACTTGGGTTCACTCCTTCTCCGTCGGCCGACCAAGTCTACGCCATTGTCCGAGCGATTTCTGGCCAGTTCCGACGATTCTCCGATGGTTCCTTGTTTTGCCGCTGAGTGGAAGTTTTTTGGGTTTGTTAAAACCGTTTTTGATTCCTTTTTTTCTTTTCAGATTTATTGTTGTTTGGGTTGTGTGCTTTTATCTCTTCAATATGTCAGAGACTAAGGTATCTGCCACCAAAGTCTTCGACAATCGGATCCATTCCCACACTCTCACTGTCCAAATCACCACCATTCGACTTAATGGGGATAACTTTCTTCGTTGGTCCCAGAGTGTTCGGATGTATATTTGTGGCCAAGGGAAGATAGGGCATCTCACCAGAGAAAAAATCGCTCCAAGTCCAGATGACCCTTTATTTGTTGTGTGGGACGTGAAAAACTCCATGGTTATGATATGGCTCGTCAACTCTATGGTGGAAGACATCAGTAGTAACTACATGTGCTACATTACGACCAAGAAATTATGGGACAGTGTGACTCAAATGTATTCTGATTTGGGTAACTAGTCACAAGTGTTCGAGCTGAATCTTAAGTTGGGTGAAATACGACAAAGAGGCAACTCAGTTACACAATATTTTCACTATTTGGAAAGGATGTGGTAAGAACTTAAGCTGTTTAATACGTATGAGTAGAAGTCCACAGATGACCAAAAACATTATCGGAAAACTGTTGAAAATGGTCGCATTTAGAAATTCCTTGCTGGCCTCAATGTTGAGTTTGATGAGGTTAGAGACAGGATACTTGGGAAAAGTACTCTTCCAAATATTAATGATGTTTTTTCTAAAGTTCGCAGAGAGGAAAGTCGCAGGAATGTTATGATTGGAAAGAAGGCAGTTGACTCAGTTGAAAGTTCCGCATTAGTGATTGAAAATACTGCAATGAAAGCTTTTGATCAATCCAACAAAACTCATGACAAGCCTCGTGTCTGGTGTGATCACTGCAACAAACCCCATCATACGAGAGAAACTTGTTGGAAACTACATGCCAAACCTGCAAAATTGGAAGAGCTCCCATCAGCATGCCTCCAATGTAAATATTGTTGATTCCAGTCCACTCAAAGAGCAAATTGATCAAATCCTGAAGCTACTAAAATCCAATTCATCGGGTAATCCTAGTGTTTACTTGGGACAAACAGTAATTCCCCTCAAGCTCTCTCGTGTCTAAATTCCTCTCCGTGGATCATCGATTCCGGAGCTACTGATCATATGACTAGTTTCTCGTGGTTATTTGAGTCATACTCCCCTATTTATTGTAAAGAAAAAGTGTGTATTGCCGATGGTAGTTGTACATCTATTGCAGGTAAAGGAACTATTCCCCCAAGTACAAAACTCATACTACATTATGTCCTTCATGCTCCTCAACTAGCTTGTAATTTATTATTTGTGAGCAAAATATCTAAGGATGCTAACTGCTGTGTTATCTTTTGTGGAACCCATTGTCTCTTTTAGGATCAAGACTCGGGGGAGACGATGAGATGTGCTAGGATGATTGATGGTCTCTAATACTTTGATGAAGTTTCAACTAGTCATAAAAAGATTCAAGGCTTGAGTAGTGTTAGTTCTTTTTCTGTTCAAGAAACTCTTATGCTTTGGCATCGTAGAGTAGGAACCACTTAAGTTTGGCTTTGGATGAATCCATCGGTGAAGATCTAAATACGCTTTTCCAGACCAACCAAAACAGAGAAGACTGCAAGAGCTCAGCCGACCACCTCTCTTCAATGCTTAACGAAAAAATTCCTCATCACTTGAGATCATTTGTAGAAGATTGTGGAATTTCACTGGTCTAAGTGAAGGATTGACGGTTCAGAACATAGAAAAGAAAGGTAGTATTCTCAATGAAAATCGTTTCCTGGAACATTAAAGGCCTTGGAGACTATTCGAAACCGCTAGCAGTTAAGCACCTTAATATGAAGATAAATCCAGAATTGGTTTTAATTCAAGAAACAAAGAAAGAGGCATTTAAAGTCGAAGCAATCAAGAAACTTTGGAGTTCAAAAGACATCGGTTGGTCATTTGTGGAAGCCTATGGCAGATCAGGAGGGTTATTGTTGATCATGTGGGATGAAAGTAAAATATCAGTCATCGAAACACTCAAAGGAGGCTACACTCTTTCCGTTAAATGTAAGACCTTATGCAAAAAAGTTTGTTGGGTAACAAATGTATACGGACCAACCGATTATAAAGAAAGAAAACACATCTGGCCGGAGCTACAAGCTTTGGCAGCTTATTGCACAAATGCCTGGTGCCTGGGTGGGGACTTCAACATCACTAGAGCAATCCATGAAAGAGTTCCAACTGGAAGATTAACTAGAGGAATGAAGAAATTCAACAAATTCATAGAAAAGGCACACTTAATGGAAATCCCTTTGAGCAATGGGCGGTTCACATGGTCAAGAGAAGGAATCAGAATATCAAGAACCTTGTTAGACAGATTTCTAGTGACAAACGAATGGGATGAAGCTTTTGAAGGCACTTGA

mRNA sequence

ATGTTTTTCCTGTCTTATTGGCATTTCTCAGAAGATAATGATGATCTTGGAGTTACTCGTTTATCAAAATCCGAATCTTCCTCTAGTTGGAAGATTGAATATGTGGTTTGGCCACCCACCGAGGACATCTTCGCCGGACGTCTCACCTCAGTCACCGGACAACGCCCAGCCTCCCAGTTGACGCCAGACCGCTGGTCGTTCGTGGATCCTGTGAGTGCAGAAGAAAGTCGCAAATCGCGTGCCCTAACCAACGCCGATGCCGACGCTGTTGTGACTTGGGTTCACTCCTTCTCCGTCGGCCGACCAAGTCTACGCCATTGTCCGAGCGATTTCTGGCCAGTTCCGACGATTCTCCGATGGTTCCTTGTTTTGCCGCTGAGTGGAAGTTTTTTGGAGACTAAGGTATCTGCCACCAAAGTCTTCGACAATCGGATCCATTCCCACACTCTCACTGTCCAAATCACCACCATTCGACTTAATGGGGATAACTTTCTTCGTTGGTCCCAGAGTGTTCGGATGTATATTTGTGGCCAAGGGAAGATAGGGCATCTCACCAGAGAAAAAATCGCTCCAAGTCCAGATGACCCTTTATTTGTTGTGTGGGACGTGAAAAACTCCATGGTTATGATATGGCTCGTCAACTCTATGGTGGAAGACATCAGTAGTAACTACATGTGCTACATTACGACCAAGAAATTATGGGACAGTGTGACTCAAATGTATTCTGATTTGGTTCGCAGAGAGGAAAGTCGCAGGAATGTTATGATTGGAAAGAAGGCAGTTGACTCAGTTGAAAGTTCCGCATTAGTGATTGAAAATACTGCAATGAAAGCTTTTGATCAATCCAACAAAACTCATGACAAGCCTCGTGTCTGGTGTGATCACTGCAACAAACCCCATCATACGAGAGAAACTTGTTGGAAACTACATGCCAAACCTGCAAAATTGGAAGAGCTCCCATCAGCATGCCTCCAATGCCTTGGAGACTATTCGAAACCGCTAGCAGTTAAGCACCTTAATATGAAGATAAATCCAGAATTGGTTTTAATTCAAGAAACAAAGAAAGAGGCATTTAAAGTCGAAGCAATCAAGAAACTTTGGAGTTCAAAAGACATCGGTTGGTCATTTGTGGAAGCCTATGGCAGATCAGGAGGGTTATTGTTGATCATGTGGGATGAAAGTAAAATATCAGTCATCGAAACACTCAAAGGAGGCTACACTCTTTCCGTTAAATGTAAGACCTTATGCAAAAAAGTTTGTTGGGTAACAAATGTATACGGACCAACCGATTATAAAGAAAGAAAACACATCTGGCCGGAGCTACAAGCTTTGGCAGCTTATTGCACAAATGCCTGGTGCCTGGGTGGGGACTTCAACATCACTAGAGCAATCCATGAAAGAGTTCCAACTGGAAGATTAACTAGAGGAATGAAGAAATTCAACAAATTCATAGAAAAGGCACACTTAATGGAAATCCCTTTGAGCAATGGGCGGTTCACATGGTCAAGAGAAGGAATCAGAATATCAAGAACCTTGTTAGACAGATTTCTAGTGACAAACGAATGGGATGAAGCTTTTGAAGGCACTTGA

Coding sequence (CDS)

ATGTTTTTCCTGTCTTATTGGCATTTCTCAGAAGATAATGATGATCTTGGAGTTACTCGTTTATCAAAATCCGAATCTTCCTCTAGTTGGAAGATTGAATATGTGGTTTGGCCACCCACCGAGGACATCTTCGCCGGACGTCTCACCTCAGTCACCGGACAACGCCCAGCCTCCCAGTTGACGCCAGACCGCTGGTCGTTCGTGGATCCTGTGAGTGCAGAAGAAAGTCGCAAATCGCGTGCCCTAACCAACGCCGATGCCGACGCTGTTGTGACTTGGGTTCACTCCTTCTCCGTCGGCCGACCAAGTCTACGCCATTGTCCGAGCGATTTCTGGCCAGTTCCGACGATTCTCCGATGGTTCCTTGTTTTGCCGCTGAGTGGAAGTTTTTTGGAGACTAAGGTATCTGCCACCAAAGTCTTCGACAATCGGATCCATTCCCACACTCTCACTGTCCAAATCACCACCATTCGACTTAATGGGGATAACTTTCTTCGTTGGTCCCAGAGTGTTCGGATGTATATTTGTGGCCAAGGGAAGATAGGGCATCTCACCAGAGAAAAAATCGCTCCAAGTCCAGATGACCCTTTATTTGTTGTGTGGGACGTGAAAAACTCCATGGTTATGATATGGCTCGTCAACTCTATGGTGGAAGACATCAGTAGTAACTACATGTGCTACATTACGACCAAGAAATTATGGGACAGTGTGACTCAAATGTATTCTGATTTGGTTCGCAGAGAGGAAAGTCGCAGGAATGTTATGATTGGAAAGAAGGCAGTTGACTCAGTTGAAAGTTCCGCATTAGTGATTGAAAATACTGCAATGAAAGCTTTTGATCAATCCAACAAAACTCATGACAAGCCTCGTGTCTGGTGTGATCACTGCAACAAACCCCATCATACGAGAGAAACTTGTTGGAAACTACATGCCAAACCTGCAAAATTGGAAGAGCTCCCATCAGCATGCCTCCAATGCCTTGGAGACTATTCGAAACCGCTAGCAGTTAAGCACCTTAATATGAAGATAAATCCAGAATTGGTTTTAATTCAAGAAACAAAGAAAGAGGCATTTAAAGTCGAAGCAATCAAGAAACTTTGGAGTTCAAAAGACATCGGTTGGTCATTTGTGGAAGCCTATGGCAGATCAGGAGGGTTATTGTTGATCATGTGGGATGAAAGTAAAATATCAGTCATCGAAACACTCAAAGGAGGCTACACTCTTTCCGTTAAATGTAAGACCTTATGCAAAAAAGTTTGTTGGGTAACAAATGTATACGGACCAACCGATTATAAAGAAAGAAAACACATCTGGCCGGAGCTACAAGCTTTGGCAGCTTATTGCACAAATGCCTGGTGCCTGGGTGGGGACTTCAACATCACTAGAGCAATCCATGAAAGAGTTCCAACTGGAAGATTAACTAGAGGAATGAAGAAATTCAACAAATTCATAGAAAAGGCACACTTAATGGAAATCCCTTTGAGCAATGGGCGGTTCACATGGTCAAGAGAAGGAATCAGAATATCAAGAACCTTGTTAGACAGATTTCTAGTGACAAACGAATGGGATGAAGCTTTTGAAGGCACTTGA

Protein sequence

MFFLSYWHFSEDNDDLGVTRLSKSESSSSWKIEYVVWPPTEDIFAGRLTSVTGQRPASQLTPDRWSFVDPVSAEESRKSRALTNADADAVVTWVHSFSVGRPSLRHCPSDFWPVPTILRWFLVLPLSGSFLETKVSATKVFDNRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWDVKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDLVRREESRRNVMIGKKAVDSVESSALVIENTAMKAFDQSNKTHDKPRVWCDHCNKPHHTRETCWKLHAKPAKLEELPSACLQCLGDYSKPLAVKHLNMKINPELVLIQETKKEAFKVEAIKKLWSSKDIGWSFVEAYGRSGGLLLIMWDESKISVIETLKGGYTLSVKCKTLCKKVCWVTNVYGPTDYKERKHIWPELQALAAYCTNAWCLGGDFNITRAIHERVPTGRLTRGMKKFNKFIEKAHLMEIPLSNGRFTWSREGIRISRTLLDRFLVTNEWDEAFEGT

Homology

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BLAST of Cla97C06G111455 vs. NCBI nr
Match: XP_038876676.1 (uncharacterized protein LOC120069076 [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-55
Identity = 104/186 (55.91%), Postives = 137/186 (73.66%), Query Frame = 0


Query: 327 LGDYSKPLAVKHLNMKINPELVLIQETKKEAFKVEAIKKLWSSKDIGWSFVEAYGRSGGL 386
           LGD SK L +K    K+NP++VLIQETKK+  +   IK LWSSK++G +FVEA G+SGGL
Sbjct: 11  LGDSSKRLLLKRFLKKVNPDIVLIQETKKDRIEGSFIKSLWSSKEVGCAFVEAKGKSGGL 70

Query: 387 LLIMWDESKISVIETLKGGYTLSVKCKTLCKKVCWVTNVYGPTDYKERKHIWPELQALAA 446
           L + WD+SKI V    K  ++LS+KC+T+ KK+CW+TNVYGP DY+ER+ +W EL +LA 
Sbjct: 71  LTV-WDDSKILVSSISKDEFSLSIKCQTINKKICWITNVYGPCDYQERRRLWAELSSLAE 130

Query: 447 YCTNAWCLGGDFNITRAIHERVPTGRLTRGMKKFNKFIEKAHLMEIPLSNGRFTWSREGI 506
              + WC+GGDFN  R  HER P G+ TR M  FNKFI   +L+EIPLSNG+FTWS+EG 
Sbjct: 131 KLDDPWCIGGDFNSIRRRHERYPVGKATRDMNNFNKFIRLNNLLEIPLSNGQFTWSKEGD 190

Query: 507 RISRTL 513
            +S++L
Sbjct: 191 VVSKSL 195

[Close]

BLAST of Cla97C06G111455 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-54
Identity = 101/183 (55.19%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 347 LVLIQETKKEAFKVEAIKKLWSSKDIGWSFVEAYGRSGGLLLIMWDESKISVIETLKGGY 406
           LV+    + +   +  IK LWSSKDIGW  VE++GR GG +L MWD SKI V+ETLKGGY
Sbjct: 71  LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGG-ILTMWDMSKIKVVETLKGGY 130

Query: 407 TLSVKCKTLCKKVCWVTNVYGPTDYKERKHIWPELQALAAYCTNAWCLGGDFNITRAIHE 466
           +LS+   T CKK CW+TNVYGP DY+ER+ +W  L +L+ YCT AWC+GG  NITR  HE
Sbjct: 131 SLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHE 190

Query: 467 RVPTGRLTRGMKKFNKFIEKAHLMEIPLSNGRFTWSREGIRISRTLLDRFLVTNEWDEAF 526
             P  + TRGM++FN  I+  ++ E+PL NGR TWSREG  ISR+LLD F +  EWDE  
Sbjct: 191 CFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEIS 250

Query: 527 EGT 530
           E +
Sbjct: 251 ENS 252

[Close]

BLAST of Cla97C06G111455 vs. NCBI nr
Match: XP_006471430.1 (uncharacterized protein LOC102629445 [Citrus sinensis])

HSP 1 Score: 201.4 bits (511), Expect = 1.9e-47
Identity = 114/267 (42.70%), Postives = 139/267 (52.06%), Query Frame = 0


Query: 144 RIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWDV 203
           R HS++ +VQITTIRLNGDNFLRWSQSVRMYI GQGKIG++T +K  P+ DDPL+  WD 
Sbjct: 25  RNHSNSHSVQITTIRLNGDNFLRWSQSVRMYIRGQGKIGYITGDKKVPANDDPLYATWDA 84

Query: 204 KNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------------- 263
           +NSMVM WLVNSM EDISSNYMCY T K+LWD+V+QMYSDL                   
Sbjct: 85  ENSMVMTWLVNSMEEDISSNYMCYPTAKELWDNVSQMYSDLGNQSQVFELTLRLGEIRQG 144

Query: 264 ------------------------------------------------------------ 314
                                                                       
Sbjct: 145 DDSVTKYFNSLKRLWQDLDLFNTYEWKSADDCNHHKKTVEDSRIYKFLAGLNVEFDEVRG 204

[Close]

BLAST of Cla97C06G111455 vs. NCBI nr
Match: KAF5480722.1 (hypothetical protein F2P56_001446 [Juglans regia])

HSP 1 Score: 199.5 bits (506), Expect = 7.1e-47
Identity = 122/292 (41.78%), Postives = 145/292 (49.66%), Query Frame = 0


Query: 121 FLVLPLSGSFLETKVSATKVFDNRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGK 180
           F V P S S   +K + T       +S + +VQITTIRLNGDNFLRWSQSVRMYI  +GK
Sbjct: 9   FAVPPFSSSTNPSKGNGT-------NSESHSVQITTIRLNGDNFLRWSQSVRMYIWRRGK 68

Query: 181 IGHLTREKIAPSPDDPLFVVWDVKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQM 240
           +G+LT EK AP+ DDP +  WD +NSMVM WLVNSM EDISSNYMCY T ++LW++V QM
Sbjct: 69  MGYLTGEKTAPAADDPAYATWDAENSMVMTWLVNSMEEDISSNYMCYPTAQELWENVNQM 128

Query: 241 YSDL-------------------------------------------------------- 300
           YSDL                                                        
Sbjct: 129 YSDLGNQSQNFELTLKLGEMRQGEDGVTKYFNSLKRVRQDLDLFNTYEWKSVEDSLHHKK 188

Query: 301 ----------------------------------------VRREESRRNVMIGKKAVD-S 315
                                                   VRREESR N M+GKK    +
Sbjct: 189 IVEDNWIFKFLAGLNIEFDEVRGRIIGRLPLPSIGDVFSEVRREESRTNEMLGKKGPGVA 248

[Close]

BLAST of Cla97C06G111455 vs. NCBI nr
Match: RVW16202.1 (hypothetical protein CK203_074282 [Vitis vinifera])

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-45
Identity = 117/276 (42.39%), Postives = 139/276 (50.36%), Query Frame = 0


Query: 137 ATKVFDNRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDP 196
           ++K+      SH  +VQITTIRLNGDNFLRWSQSVRMYI G+GK+G+LT EK AP+ DDP
Sbjct: 24  SSKISPTTSESH--SVQITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTGEKKAPAVDDP 83

Query: 197 LFVVWDVKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------ 256
            + +WD +NSMVM WLVNSM EDISSNYMCY TT++LW++V QMYSDL            
Sbjct: 84  NYAIWDTENSMVMTWLVNSMEEDISSNYMCYPTTQELWENVNQMYSDLGNQSQIFELTLK 143

Query: 257 ------------------------------------------------------------ 315
                                                                       
Sbjct: 144 LGEIRQGEDNITKYFNSLKRIWQDLDLFNTYEWKSIEDGLHHKKTMEDNRIFKFLADLNA 203

[Close]

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-55
Identity = 101/183 (55.19%), Postives = 128/183 (69.95%), Query Frame = 0


Query: 347 LVLIQETKKEAFKVEAIKKLWSSKDIGWSFVEAYGRSGGLLLIMWDESKISVIETLKGGY 406
           LV+    + +   +  IK LWSSKDIGW  VE++GR GG +L MWD SKI V+ETLKGGY
Sbjct: 71  LVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGG-ILTMWDMSKIKVVETLKGGY 130

Query: 407 TLSVKCKTLCKKVCWVTNVYGPTDYKERKHIWPELQALAAYCTNAWCLGGDFNITRAIHE 466
           +LS+   T CKK CW+TNVYGP DY+ER+ +W  L +L+ YCT AWC+GG  NITR  HE
Sbjct: 131 SLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITRWAHE 190

Query: 467 RVPTGRLTRGMKKFNKFIEKAHLMEIPLSNGRFTWSREGIRISRTLLDRFLVTNEWDEAF 526
             P  + TRGM++FN  I+  ++ E+PL NGR TWSREG  ISR+LLD F +  EWDE  
Sbjct: 191 CFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEWDEIS 250

Query: 527 EGT 530
           E +
Sbjct: 251 ENS 252

[Close]

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL
Match: A0A2N9I543 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47035 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.1e-48
Identity = 119/270 (44.07%), Postives = 139/270 (51.48%), Query Frame = 0


Query: 143 NRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWD 202
           N  +S + +VQITTIRLNGDNFLRWSQSVRMYI G+GK+G+LT EK AP+  DP +  WD
Sbjct: 24  NGTNSESHSVQITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTGEKTAPAEADPTYATWD 83

Query: 203 VKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------------ 262
            +NSMVM WLVNSM EDISSNYMCY T ++LW++V QMYSDL                  
Sbjct: 84  AENSMVMTWLVNSMEEDISSNYMCYPTAQELWENVNQMYSDLGNQSQIFELTLKLGEMRQ 143

Query: 263 ------------------------------------------------------------ 315
                                                                       
Sbjct: 144 GEDSVTKYFNSLKRVWQDLDLFNTYEWKSVEDSRHHKKIVEDNRIFKFLAGLNIEFDEVR 203

[Close]

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL
Match: A0A2N9EE05 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS847 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.0e-48
Identity = 119/270 (44.07%), Postives = 139/270 (51.48%), Query Frame = 0


Query: 143 NRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWD 202
           N  +S + +VQITTIRLNGDNFLRWSQSVRMYI G+GK+G+LT EK AP+  DP +  WD
Sbjct: 270 NGTNSESHSVQITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTGEKTAPAEADPTYATWD 329

Query: 203 VKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------------ 262
            +NSMVM WLVNSM EDISSNYMCY T ++LW++V QMYSDL                  
Sbjct: 330 AENSMVMTWLVNSMEEDISSNYMCYPTAQELWENVNQMYSDLGNQSQIFELTLKLGEMRQ 389

Query: 263 ------------------------------------------------------------ 315
                                                                       
Sbjct: 390 GEDSVTKYFNSLKRVWQDLDLFNTYEWKSVEDSRHHKKIVEDNRIFKFLAGLNIEFDEVR 449

[Close]

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL
Match: A0A2N9GQ49 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.1e-48
Identity = 118/270 (43.70%), Postives = 139/270 (51.48%), Query Frame = 0


Query: 143 NRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWD 202
           N  +S + +VQITTIRLNGDNFLRWSQSVRMYI G+GK+G+LT EK AP+  DP +  WD
Sbjct: 24  NGTNSESHSVQITTIRLNGDNFLRWSQSVRMYIRGRGKMGYLTGEKTAPAEADPTYATWD 83

Query: 203 VKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------------ 262
            +NSMVM WLVNSM EDISSNYMCY T ++LW++V QMYSDL                  
Sbjct: 84  AENSMVMTWLVNSMEEDISSNYMCYPTAQELWENVNQMYSDLGNQSQIFELTLKLGEMRQ 143

Query: 263 ------------------------------------------------------------ 315
                                                                       
Sbjct: 144 GEDSVTKYFNSLKRVWQDLDLFNTYEWKSVEDSRHHKKIVEDNRIFKFLAGLNIECDEVR 203

[Close]

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL
Match: A0A2N9GKJ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27636 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-47
Identity = 118/270 (43.70%), Postives = 138/270 (51.11%), Query Frame = 0


Query: 143 NRIHSHTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWD 202
           N  +S + +VQITTIRLN DNFLRWSQSVRMYI G+GK+G+LT EK AP+  DP +  WD
Sbjct: 24  NGTNSESHSVQITTIRLNVDNFLRWSQSVRMYIRGRGKMGYLTGEKTAPAEADPTYATWD 83

Query: 203 VKNSMVMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDL------------------ 262
            +NSMVM WLVNSM EDISSNYMCY T ++LW++V QMYSDL                  
Sbjct: 84  AENSMVMTWLVNSMEEDISSNYMCYPTAQELWENVNQMYSDLGNQSQIFELTLKLGEMRQ 143

Query: 263 ------------------------------------------------------------ 315
                                                                       
Sbjct: 144 GEDSVTKYFNSLKRVWQDLDLFNTYEWKSMEDSRHHKEIVEDNRIFKFLVGLNIEFDEVR 203

[Close]

BLAST of Cla97C06G111455 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-08
Identity = 33/120 (27.50%), Postives = 58/120 (48.33%), Query Frame = 0


Query: 148 HTLTVQITTIRLNGDNFLRWSQSVRMYICGQGKIGHLTREKIAPSPDDPLFVVWDVKNSM 207
           H     I  +  + DN++ W    R ++    K G +      P P  PL+  W+  N+M
Sbjct: 26  HPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAM 85

Query: 208 VMIWLVNSMVEDISSNYMCYITTKKLWDSVTQMYSDLV--RREESRRNVMIGKKAVDSVE 266
           VM WL+NSM + +  + M   T  K+W+ + +++   V  +  + RR +   ++  DSVE
Sbjct: 86  VMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVE 145

The following BLAST results are available for this feature:

BLAST of Cla97C06G111455 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876676.1	1.9e-55	55.91	uncharacterized protein LOC120069076 [Benincasa hispida]	[more]
TYJ98683.1	1.2e-54	55.19	hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]	[more]
XP_006471430.1	1.9e-47	42.70	uncharacterized protein LOC102629445 [Citrus sinensis]	[more]
KAF5480722.1	7.1e-47	41.78	hypothetical protein F2P56_001446 [Juglans regia]	[more]
RVW16202.1	3.0e-45	42.39	hypothetical protein CK203_074282 [Vitis vinifera]	[more]

BLAST of Cla97C06G111455 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C06G111455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHE3	5.9e-55	55.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2N9I543	3.1e-48	44.07	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47035 PE=4 SV=1	[more]
A0A2N9EE05	7.0e-48	44.07	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS847 PE=4 SV=1	[more]
A0A2N9GQ49	9.1e-48	43.70	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1	[more]
A0A2N9GKJ5	3.5e-47	43.70	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27636 PE=4 SV=1	[more]

BLAST of Cla97C06G111455 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21280.1	1.8e-08	27.50	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 324..529 e-value: 3.7E-20 score: 74.7
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 337..526
None	No IPR available	PANTHER	PTHR37610:SF41	SUBFAMILY NOT NAMED	coord: 150..246
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 150..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G111455.1	Cla97C06G111455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process