Cla97C05G101540 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCCTCTCTCTCTTTCTCTCTCCCTTCAATCTCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTCTCTCTGTCGCCATTGCAAATCTGGAGATACTCCTTCATCCTCTTCCCCATTCATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGTACTTACCCTACTTTCTTCCTCAATACTTCCAATTATATTCGTTTTAGATGTTTTTTGTTGTTCCGATTAGGTTTTGCTTCTCTGATGTTTCGTATCTTCAATTTCATGCTTTGTCACCGTGACTGCACTGTTTCTCTCTATTTTCGTGTTTAAAGTGAAAAATATACGAATTAAGCAAGTGAAAGAAAGAGGAAGTGGAAGAATACAGTACTGCTTTCGCACTTACTTCTCGTGACTGAAGGATTTTTATTTTGTATCTTGTTCTGCTCTGTTTGGATCGATCTTGCCCTTTGTCCATGGAATTTGGAGGGATGTGTAAGGGGTTTGGATCTATGGCCAATTATTCTGGAAATTCAGCATGAGTTTTGATTGTTTAACATTATGATTCGTGATTAAGATGACTAATAGTAGCGTTTTCCCGTTATTTATTAAGATAGAGCATGAACTTGCCGCGGGAACTGCTGATAATGCGGTTTCGGTTTTAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGGTTCAGTGCCGATTGCTCTTTCTTGATGAGTTTTAACTCTTTTCTGATTATGGCTTGTAAATTCTCTTTTTGTTTTTTTCCTTGCTTTCATCTACTCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGGTAGATCTTTGGGCCTTAGACATTATAAATTATCAATATTTCATTGATAGATTTGTGCCTCCCCTTGGTTGTAATTGTAATTTAGTTTATCAAGTTGAAGTATGCTAGTTAGTGATTCTACGTTGGAGGATTTTTGCTCTGTATCTAGTCTTTACTACCGAAGTCTAAACAAATTAATGTGACTGAAGTGAAACTGAACTTTTCATTGCAATCTGCTATGTCCAAGTTCCTCTTATGATTTTAATTTCAAATTGTACGGCAATCATAGTTTCACTGATATGAAACTGAATTATTTCAGATGATAATGACTTTTAATTTTAAGCTGGACAAATGATTTTCATGTTGCAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAACTACCATCTCTTGCTCCAAAATGATGATCACTGATTTCTTTAGGTTGTTCCTTAAGTTCCATGAAAGGAAGATGGTATTTTACAAGAATTCTATTACACAGCCAAAAGATAGATAGATCCCAGATTGTCACCAAGACGTGTCGAAAGACTTATCGCTACTTCTCTAACTCGAGAAGGGTTATAGATGATCAGAGATTGCTGGTGAAGTCTATAAAGCTTATTTTGATGTTCTTGGGTTTGTCTGATAATGTAAGTTCCAACACCTTTAGGTGTCTGCACTTACGTAGTAACTAGCTAATCAATAATTATGGTTTTGACTGGATAGATGTGTATGATATTTCATTCAGCATATGTATATATATATTTATTTCTTACAACAAGAAGAGCTTGAAATGAAATAGTAAGAAAATTTCAATTCTCTCCAATTGTTCGTAAGTTATTTGAACAAGATTTTTA CCGCCTCTCTCTCTTTCTCTCTCCCTTCAATCTCTCTCCCACTGGCCCGCTTCCATCTTTCTTCCCTCTCTCTGTCGCCATTGCAAATCTGGAGATACTCCTTCATCCTCTTCCCCATTCATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAACTACCATCTCTTGCTCCAAAATGATGATCACTGATTTCTTTAGGTTGTTCCTTAAGTTCCATGAAAGGAAGATGGTATTTTACAAGAATTCTATTACACAGCCAAAAGATAGATAGATCCCAGATTGTCACCAAGACGTGTCGAAAGACTTATCGCTACTTCTCTAACTCGAGAAGGGTTATAGATGATCAGAGATTGCTGGTGAAGTCTATAAAGCTTATTTTGATGTTCTTGGGTTTGTCTGATAATGTAAGTTCCAACACCTTTAGGTGTCTGCACTTACGTAGTAACTAGCTAATCAATAATTATGGTTTTGACTGGATAGATGTGTATGATATTTCATTCAGCATATGTATATATATATTTATTTCTTACAACAAGAAGAGCTTGAAATGAAATAGTAAGAAAATTTCAATTCTCTCCAATTGTTCGTAAGTTATTTGAACAAGATTTTTA ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAA MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVEVIST Homology
BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_038896198.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida]) HSP 1 Score: 421.4 bits (1082), Expect = 5.4e-114 Identity = 216/240 (90.00%), Postives = 224/240 (93.33%), Query Frame = 0
BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_038896200.1 (cold-regulated protein 27 isoform X3 [Benincasa hispida]) HSP 1 Score: 421.0 bits (1081), Expect = 7.0e-114 Identity = 216/241 (89.63%), Postives = 224/241 (92.95%), Query Frame = 0
BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_038896199.1 (cold-regulated protein 27 isoform X2 [Benincasa hispida]) HSP 1 Score: 419.9 bits (1078), Expect = 1.6e-113 Identity = 215/239 (89.96%), Postives = 223/239 (93.31%), Query Frame = 0
BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022935855.1 (uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata]) HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-106 Identity = 203/242 (83.88%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022935854.1 (uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata]) HSP 1 Score: 394.0 bits (1011), Expect = 9.2e-106 Identity = 202/240 (84.17%), Postives = 213/240 (88.75%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.2e-13 Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy Swiss-Prot
Match: Q8L983 (Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.8e-04 Identity = 55/234 (23.50%), Postives = 97/234 (41.45%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy TrEMBL
Match: A0A6J1FBV0 (uncharacterized protein LOC111442637 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442637 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 2.0e-106 Identity = 203/242 (83.88%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy TrEMBL
Match: A0A6J1F6L8 (uncharacterized protein LOC111442637 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442637 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 4.4e-106 Identity = 202/240 (84.17%), Postives = 213/240 (88.75%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy TrEMBL
Match: A0A6J1IM11 (uncharacterized protein LOC111476815 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105 Identity = 200/241 (82.99%), Postives = 211/241 (87.55%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy TrEMBL
Match: A0A6J1IFL9 (uncharacterized protein LOC111476815 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.9e-105 Identity = 199/239 (83.26%), Postives = 210/239 (87.87%), Query Frame = 0
BLAST of Cla97C05G101540 vs. ExPASy TrEMBL
Match: A0A0A0L0A2 (Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.3e-101 Identity = 191/242 (78.93%), Postives = 209/242 (86.36%), Query Frame = 0
BLAST of Cla97C05G101540 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 ) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15 Identity = 72/222 (32.43%), Postives = 114/222 (51.35%), Query Frame = 0
BLAST of Cla97C05G101540 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 ) HSP 1 Score: 76.6 bits (187), Expect = 3.0e-14 Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of Cla97C05G101540 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 ) HSP 1 Score: 76.6 bits (187), Expect = 3.0e-14 Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of Cla97C05G101540 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 55/234 (23.50%), Postives = 97/234 (41.45%), Query Frame = 0
BLAST of Cla97C05G101540 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 55/234 (23.50%), Postives = 97/234 (41.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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