Cla97C05G082820 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C05G082820
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	50S ribosomal protein L2, chloroplastic
Location	Cla97Chr05: 2140216 .. 2141140 (+)
RNA-Seq Expression	Cla97C05G082820
Synteny	Cla97C05G082820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATATGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAAGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCATTCTAAAGGCATCAAGCAGTTTAGACTTCGTTCATCAAGGTTCATCACTATAAACAGATTAGATTAGAACCAATGAACATCTTCTAAACTTTCAAATGTTATTTCTAAATCTAAGCAAGATAACATTTGCATTTTAACTTCTGCACGAAAAATTTACCCAGAGACGATTAACAAAATACTAACAAAACCTACCTTTCAAAGAAATCATGTGTATGCTAAGGGATAGCTCAGGAACAGCATTGAGACAACATTTCAGAAACAAGGTTTGACAATGTTAGCTTTTCCTTTTCATAGCAGCTAAGGATATGTTAGTATCGTCGAAAATGCGGTACACAGGAACCATGTTCCTGGGAAAAAGCTTGTATCCAAAGATTCGAAGTCCCGAAAAGGAGGAGCTAACAAAGAAGCTTGCAGGAATTTAG

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCCTAAGGATATGTTAGTATCGTCGAAAATGCGGTACACAGGAACCATGTTCCTGGGAAAAAGCTTGTATCCAAAGATTCGAAGTCCCGAAAAGGAGGAGCTAACAAAGAAGCTTGCAGGAATTTAG

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCCTAAGGATATGTTAGTATCGTCGAAAATGCGGTACACAGGAACCATGTTCCTGGGAAAAAGCTTGTATCCAAAGATTCGAAGTCCCGAAAAGGAGGAGCTAACAAAGAAGCTTGCAGGAATTTAG

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYPKDMLVSSKMRYTGTMFLGKSLYPKIRSPEKEELTKKLAGI

Homology

[Close]

BLAST of Cla97C05G082820 vs. NCBI nr
Match: YP_004563909.1 (ribosomal protein L2 [Nelumbo lutea] >YP_004563930.1 ribosomal protein L2 [Nelumbo lutea] >YP_009093991.1 ribosomal protein L2 [Nelumbo nucifera] >YP_009094012.1 ribosomal protein L2 [Nelumbo nucifera] >ACN49366.1 ribosomal protein L2 [Nelumbo lutea] >ACN49387.1 ribosomal protein L2 [Nelumbo lutea] >ACN49451.1 ribosomal protein L2 [Nelumbo nucifera] >ACN49472.1 ribosomal protein L2 [Nelumbo nucifera] >ADD30227.1 ribosomal protein L2 [Nelumbo nucifera])

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 65/81 (80.25%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK-DMLVSSKMRYTGTMFLGK 81
           K D   + K   +G +  G+
Sbjct: 61 RKIDFRRNEKKDISGRIISGR 81

[Close]

BLAST of Cla97C05G082820 vs. NCBI nr
Match: TXG48645.1 (hypothetical protein EZV62_024520 [Acer yangbiense])

HSP 1 Score: 128.3 bits (321), Expect = 3.9e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 SK 62

[Close]

BLAST of Cla97C05G082820 vs. NCBI nr
Match: QGW14145.1 (ribosomal protein L2 [Acer tataricum subsp. ginnala] >QGW14146.1 ribosomal protein L2 [Acer tataricum subsp. ginnala] >QGW14232.1 50S ribosomal protein L2 [Acer tataricum subsp. ginnala])

HSP 1 Score: 127.9 bits (320), Expect = 5.0e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. NCBI nr
Match: YP_009715670.1 (ribosomal protein L2 [Schotia brachypetala] >YP_009715692.1 ribosomal protein L2 [Schotia brachypetala] >QGL08782.1 ribosomal protein L2 [Schotia brachypetala] >QGL08805.1 ribosomal protein L2 [Schotia brachypetala])

HSP 1 Score: 127.9 bits (320), Expect = 5.0e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. NCBI nr
Match: QGX42562.1 (ribosomal protein L2 [Toxicodendron vernicifluum] >QGX42589.1 ribosomal protein L2 [Toxicodendron vernicifluum])

HSP 1 Score: 127.9 bits (320), Expect = 5.0e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-29
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-29
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot
Match: Q09FY3 (50S ribosomal protein L2, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-29
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot
Match: A0A377 (50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNG VDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot
Match: A0A398 (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-28
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNG VDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGTVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL
Match: F6GPV5 (50S ribosomal protein L2, chloroplastic OS=Nelumbo lutea OX=4431 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-27
Identity = 65/81 (80.25%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK-DMLVSSKMRYTGTMFLGK 81
           K D   + K   +G +  G+
Sbjct: 61 RKIDFRRNEKKDISGRIISGR 81

[Close]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL
Match: D3WC85 (ribosomal protein L2 OS=Nelumbo nucifera OX=4432 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-27
Identity = 65/81 (80.25%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK-DMLVSSKMRYTGTMFLGK 81
           K D   + K   +G +  G+
Sbjct: 61 RKIDFRRNEKKDISGRIISGR 81

[Close]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL
Match: A0A5C7GVW4 (Ribosomal_L2_C domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024520 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 SK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL
Match: A0A649Z9S0 (50S ribosomal protein L2, chloroplastic OS=Amelanchier cusickii OX=52524 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL
Match: A0A159BNZ5 (50S ribosomal protein L2, chloroplastic OS=Citrus platymamma OX=237571 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27
Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

[Close]

BLAST of Cla97C05G082820 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27
Identity = 58/62 (93.55%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61 PK 63
           K
Sbjct: 61 RK 62

The following BLAST results are available for this feature:

BLAST of Cla97C05G082820 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004563909.1	1.0e-26	80.25	ribosomal protein L2 [Nelumbo lutea] >YP_004563930.1 ribosomal protein L2 [Nelum...	[more]
TXG48645.1	3.9e-26	98.39	hypothetical protein EZV62_024520 [Acer yangbiense]	[more]
QGW14145.1	5.0e-26	98.39	ribosomal protein L2 [Acer tataricum subsp. ginnala] >QGW14146.1 ribosomal prote...	[more]
YP_009715670.1	5.0e-26	98.39	ribosomal protein L2 [Schotia brachypetala] >YP_009715692.1 ribosomal protein L2...	[more]
QGX42562.1	5.0e-26	98.39	ribosomal protein L2 [Toxicodendron vernicifluum] >QGX42589.1 ribosomal protein ...	[more]

BLAST of Cla97C05G082820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09MB2	6.6e-29	98.39	50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=...	[more]
Q4VZK5	6.6e-29	98.39	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
Q09FY3	6.6e-29	98.39	50S ribosomal protein L2, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl2...	[more]
A0A377	1.9e-28	96.77	50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-A P...	[more]
A0A398	1.9e-28	96.77	50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica OX=13443 GN=rpl2-B P...	[more]

BLAST of Cla97C05G082820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
F6GPV5	4.9e-27	80.25	50S ribosomal protein L2, chloroplastic OS=Nelumbo lutea OX=4431 GN=rpl2 PE=3 SV...	[more]
D3WC85	4.9e-27	80.25	ribosomal protein L2 OS=Nelumbo nucifera OX=4432 GN=rpl2 PE=3 SV=1	[more]
A0A5C7GVW4	1.9e-26	98.39	Ribosomal_L2_C domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_...	[more]
A0A649Z9S0	2.4e-26	98.39	50S ribosomal protein L2, chloroplastic OS=Amelanchier cusickii OX=52524 GN=rpl2...	[more]
A0A159BNZ5	2.4e-26	98.39	50S ribosomal protein L2, chloroplastic OS=Citrus platymamma OX=237571 GN=rpl2 P...	[more]

BLAST of Cla97C05G082820 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	1.7e-27	93.55	ribosomal protein L2	[more]
ATCG01310.1	1.7e-27	93.55	ribosomal protein L2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 1..76 e-value: 3.8E-12 score: 48.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR13691:SF55	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 3..62
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 3..62
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 2..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G082820.2	Cla97C05G082820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity