Cla97C05G080360 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C05G080360
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	StAR lipid transfer-like protein
Location	Cla97Chr05: 494833 .. 497256 (-)
RNA-Seq Expression	Cla97C05G080360
Synteny	Cla97C05G080360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTCGGCCGGTGCAACGCAGTTCGGTTGGGGTGTCGCTTCTTTCCGGCGAGGATTTATCGGCGATTCCAGATTCATGCCCCTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCGTCCGCCATCGCTTCTCTCAAGGCCTCTGGCATCCACAAGGTTCTCTTCACTTCTCTTCTACTCTGTTTCTACCAGTCGCATTCCTTCTTCCTTCCTCTCCCCCATTCTGGATTAGGTTAGAGGTTAATTGGGCGACTTCGATTAATCTGGTTTTGTATTCGTATTGGCCTTTGCAGAATTAACTGTACAAACCATATCTGATTCGTCAGTATGCTATGAATTTAGCTAAGTTTCAGGAGAAATGCAATTCTTAGTTTTTGGCAGCTTAGTTAGCATAGCTAGTTAATGTTTAATTTGAACTCCCAATTTTGTTGAATTGAATACTGAAATGGAGCAGTGGATGGAAAAATATTTCTATGGGTATTAGTATCTTAGGTCGTGTTAGATTATTTGTTGTTGACATTAGTCATGTTGTTGTTTATCTTGAACAGTTTTTTCACCTGGCTTGATGTTGTGGTTAAGTTCGAGAGTCTTCTAATCTGAGTTGAATTTAGGTATTTTTTTTCCATGATTTTTGTTGGAAAAATCGTCACCTTGCACTTTTCATAATATAGATGGGTTATTCCTCTCATCGCCAATTAGTTTTGAGATGGAATCCATGTTATCTAATAATTTTGAGTGGTTCATTTGTGCATAATTTTTTACATATGACTTTCTGGTGTTATCCACTTGTTTAGATTAAGAGGTTTATGGTGTGGGATGAAATTGAAAGTTGCAATATTATAAACTTTCATAAAGGTTGTTTCAAAGAAAATCGACGTGAAATGATCGGGTGGTGAATAGAACTCCAGCCTGAATTAAGTCTAAGAGAACGACATTCAGGTATAGACTTTTTTGTCCAAAATCTTAATGGGTTTATCAACTCTAAGGACAATTTTGAAAACTTTATAAAAGGTCAAAAGATAATATTGCAACGTTTTGAAAGAATAAGAGCATGTTTTAATAAAAGATGAAATTCAGGAGTATTTTTTAAAATTTAGCCTAAATATTGGTACACTTGGAAACGACATACAAGTTGAAGAGGCTCCCCATATGGTAAAGGTTTGAGACTGTGGGTGAGAATTTAACCCTTGTTCCTTGTCTTTCCATAAAAAGTGGTGTCAAACTCAATTCTGACACCACGAAATATATAGTTAGATTTACATCATTGTGTTGAAGCCAAATGTTAGCTCAATGCAAAAGTAACAGCTGAAGTTTTTGGTTAATACGAAATCGAAGATTATCCAATGTTTAGGAGTATGAAAGGTCTGTATTTGTTTTCTTCTATGCCCTAGCTTCACTGTAATTGGTGTGTGACAGAGCAGGAGTAATTTTGGACGTATTAAGAGGGATGCCATTCCGTATAGGTAAGCCTCCATGATCAACAAGGAGGCAGGTAGCATTCATGGTTATGACAGGCTTGTGGTATAAAGATAGGATCTTGATGTCATCATTCTGAACTTAAAAGAACTTCGGTGATCAGAAATTGTTCTTTTTTGCTTGTTGCTCTAATGGATCAACAAATGAAGCCATTGTTTGTCATTTCTTACAAAATCATGGTTTTGTAAAAGTGATTTCAATAGACACAGAACTTCTTAGAAAGCGGTTTGATCTTGACGAAAGAGGACACATCTAGAAAGGAAAATTTCTAGATCTAGAAATAGCTTGCTGAAATGAAGGGTTTGATTACTAAATTTTGGTTTTGGGGTGTATTGGAACAGGTGGAAGACATGATGGAAGTAGGAGCGAGTATCAGGAATGGATTGGGGATTCGTCCAAGGGCACAAGATGAATGAACGAGTATGGCAGCTTGTGTTATTCTATTCTGTGGGTAACTATGAACATCTTCACTTTCACTTTCACTTTCAGGAATGCATATTCTCACCAACATGAGTCAAACTAAAGTCTCTCCATAGCACAAACTCTGCACTTTCTTCGATGGTGAAAGAGTCGCGAAGGGTCAGATTCCTCTTTTCTTTATCAACACAATTGGGTACTTGCTCTCAAAGAAAGGACCTCCTGAAATTATTCTGTTGGGTAGCAATGAGATCAAATCACTGATTAGGACTTAGAAAGTCATTCCAAATGATCTTAATTTACTTTACTGCTTACTTTTATAGATGTCCCATAACCTTCCTTGGGCAACAATTTCTTATTTATTTAGGTAAAATACTCTTTTGCTGATTTGTCCATCTTTGCTTTTCTCTATTTTCTTCCTGTTTATCCAAACAAGATCCTTGTAAATTATTAACGATTCAATCTGGG

mRNA sequence

ATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTCGGCCGGTGCAACGCAGTTCGGTTGGGGTGTCGCTTCTTTCCGGCGAGGATTTATCGGCGATTCCAGATTCATGCCCCTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCGTCCGCCATCGCTTCTCTCAAGGCCTCTGGCATCCACAAGGTTCTCTTCACTTCTCTTCTACTCTGTTTCTACCAGTCGCATTCCTTCTTCCTTCCTCTCCCCCATTCTGGATTAGGTGGAAGACATGATGGAAGTAGGAGCGAGTATCAGGAATGGATTGGGGATTCGTCCAAGGGCACAAGATGAATGAACGAGAATGCATATTCTCACCAACATGAGTCAAACTAAAGTCTCTCCATAGCACAAACTCTGCACTTTCTTCGATGGTGAAAGAGTCGCGAAGGGTCAGATTCCTCTTTTCTTTATCAACACAATTGGGTACTTGCTCTCAAAGAAAGGACCTCCTGAAATTATTCTGTTGGGTAGCAATGAGATCAAATCACTGATTAGGACTTAGAAAGTCATTCCAAATGATCTTAATTTACTTTACTGCTTACTTTTATAGATGTCCCATAACCTTCCTTGGGCAACAATTTCTTATTTATTTAGGTAAAATACTCTTTTGCTGATTTGTCCATCTTTGCTTTTCTCTATTTTCTTCCTGTTTATCCAAACAAGATCCTTGTAAATTATTAACGATTCAATCTGGG

Coding sequence (CDS)

ATGGAGGAGAACGGAGGAAGCGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTCGGCCGGTGCAACGCAGTTCGGTTGGGGTGTCGCTTCTTTCCGGCGAGGATTTATCGGCGATTCCAGATTCATGCCCCTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCGTCCGCCATCGCTTCTCTCAAGGCCTCTGGCATCCACAAGGTTCTCTTCACTTCTCTTCTACTCTGTTTCTACCAGTCGCATTCCTTCTTCCTTCCTCTCCCCCATTCTGGATTAGGTGGAAGACATGATGGAAGTAGGAGCGAGTATCAGGAATGGATTGGGGATTCGTCCAAGGGCACAAGATGA

Protein sequence

MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAASSAIASLKASGIHKVLFTSLLLCFYQSHSFFLPLPHSGLGGRHDGSRSEYQEWIGDSSKGTR

Homology

[Close]

BLAST of Cla97C05G080360 vs. NCBI nr
Match: KAA0048842.1 (uncharacterized protein E6C27_scaffold171G00550 [Cucumis melo var. makuwa] >TYK20796.1 uncharacterized protein E5676_scaffold291G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33
Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
          MEENGGSDGGSNAHWWWA AGA Q GWG+ASFRRGF+GDS  MPLKAFAVASLFVGAAAS
Sbjct: 1  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 60

Query: 61 SAIASLKASGIHKVLFTSLLLCFYQSHSFFLPLPHS 97
          SAIASLKASGIHKV FT+ LLC YQSH F    P S
Sbjct: 61 SAIASLKASGIHKVHFTAFLLCIYQSHFFLHSSPSS 96

[Close]

BLAST of Cla97C05G080360 vs. NCBI nr
Match: XP_008437814.1 (PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27
Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 1   MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
           MEENGGSDGGSNAHWWWA AGA Q GWG+ASFRRGF+GDS  MPLKAFAVASLFVGAAAS
Sbjct: 29  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 88

Query: 61  SAIASLKASGIHKV 75
           SAIASLKASGIHKV
Sbjct: 89  SAIASLKASGIHKV 102

[Close]

BLAST of Cla97C05G080360 vs. NCBI nr
Match: XP_038899465.1 (uncharacterized protein LOC120086725 [Benincasa hispida])

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1  MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
          MEE GGS+GGSNAHWWWA AGATQFGWG+ASFRRGFIG+SR MPLKAFAVASLFVGA AS
Sbjct: 1  MEEIGGSNGGSNAHWWWALAGATQFGWGIASFRRGFIGNSRIMPLKAFAVASLFVGAGAS 60

Query: 61 SAIASLKASGIHKV 75
          SAIASLKASGIHKV
Sbjct: 61 SAIASLKASGIHKV 74

[Close]

BLAST of Cla97C05G080360 vs. NCBI nr
Match: XP_023540027.1 (uncharacterized protein LOC111800524 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 9.3e-27
Identity = 67/79 (84.81%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
          M ENGGSDGGSNAHWWWA AGATQFGWG+ASFRRG IGDS  MP KAFAVASLFVGAAAS
Sbjct: 6  MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 65

Query: 61 SAIASLKASGIHKVLFTSL 80
          SAIASLKA+GIHK L + L
Sbjct: 66 SAIASLKAAGIHKPLLSFL 84

[Close]

BLAST of Cla97C05G080360 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515.1 hypothetical protein SDJN02_09696, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130.6 bits (327), Expect = 9.3e-27
Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
           M ENGGSDGGSNAHWWWA AGATQFGWG+ASFRRG IGDS  MP KAFAVASLFVGAAAS
Sbjct: 28  MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 87

Query: 61  SAIASLKASGIHKV 75
           SAIASLKA+GIHKV
Sbjct: 88  SAIASLKAAGIHKV 101

[Close]

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL
Match: A0A5A7TZ37 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00570 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.0e-34
Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 1  MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
          MEENGGSDGGSNAHWWWA AGA Q GWG+ASFRRGF+GDS  MPLKAFAVASLFVGAAAS
Sbjct: 1  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 60

Query: 61 SAIASLKASGIHKVLFTSLLLCFYQSHSFFLPLPHS 97
          SAIASLKASGIHKV FT+ LLC YQSH F    P S
Sbjct: 61 SAIASLKASGIHKVHFTAFLLCIYQSHFFLHSSPSS 96

[Close]

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL
Match: A0A1S3AUW2 (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 1   MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
           MEENGGSDGGSNAHWWWA AGA Q GWG+ASFRRGF+GDS  MPLKAFAVASLFVGAAAS
Sbjct: 29  MEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFVGAAAS 88

Query: 61  SAIASLKASGIHKV 75
           SAIASLKASGIHKV
Sbjct: 89  SAIASLKASGIHKV 102

[Close]

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL
Match: A0A6J1FNT4 (uncharacterized protein LOC111446882 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 67/79 (84.81%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1   MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
           M ENGGSDGGSNAHWWWA AGATQFGWG+ASFRRG IGDS  MP KAFAVASLFVGAAAS
Sbjct: 28  MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 87

Query: 61  SAIASLKASGIHKVLFTSL 80
           SAIASLKA+GIHK L + L
Sbjct: 88  SAIASLKAAGIHKPLLSFL 106

[Close]

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL
Match: A0A6J1FMU0 (uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.5e-27
Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
           M ENGGSDGGSNAHWWWA AGATQFGWG+ASFRRG IGDS  MP KAFAVASLFVGAAAS
Sbjct: 28  MVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAAS 87

Query: 61  SAIASLKASGIHKV 75
           SAIASLKA+GIHKV
Sbjct: 88  SAIASLKAAGIHKV 101

[Close]

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL
Match: A0A0A0L700 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.0e-26
Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MEENGGSDGGSNAHWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFVGAAAS 60
          MEENGGSD GSNAHWWWA AGA Q GWG+ASFRRGFIGDS  MPLKAFAVASLFVGAAAS
Sbjct: 1  MEENGGSDAGSNAHWWWAFAGAAQLGWGIASFRRGFIGDSSNMPLKAFAVASLFVGAAAS 60

Query: 61 SAIASLKASGIHKV 75
          S IASLKASGIHKV
Sbjct: 61 STIASLKASGIHKV 74

[Close]

BLAST of Cla97C05G080360 vs. TAIR 10
Match: AT3G60480.1 (unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-15
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 2  EENGGSDGGSNA------HWWWASAGATQFGWGVASFRRGFIGDSRFMPLKAFAVASLFV 61
          E+N G+  G ++      HWWWA     Q  WG+   RRG+ GD R MPLKAF VASLFV
Sbjct: 3  EQNAGTGAGESSLLDGSGHWWWALGSGAQIMWGIRLIRRGYAGDVRLMPLKAFGVASLFV 62

Query: 62 GAAASSAIASLKASGIHKV 75
          G+ A+S++A ++A+GIH V
Sbjct: 63 GSLATSSVALVRATGIHTV 81

The following BLAST results are available for this feature:

BLAST of Cla97C05G080360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048842.1	1.0e-33	82.29	uncharacterized protein E6C27_scaffold171G00550 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008437814.1	2.5e-27	90.54	PREDICTED: uncharacterized protein LOC103483131 [Cucumis melo]	[more]
XP_038899465.1	3.2e-27	90.54	uncharacterized protein LOC120086725 [Benincasa hispida]	[more]
XP_023540027.1	9.3e-27	84.81	uncharacterized protein LOC111800524 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022941577.1	9.3e-27	89.19	uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515...	[more]

BLAST of Cla97C05G080360 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C05G080360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZ37	5.0e-34	82.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUW2	1.2e-27	90.54	uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=...	[more]
A0A6J1FNT4	4.5e-27	84.81	uncharacterized protein LOC111446882 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FMU0	4.5e-27	89.19	uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0L700	1.0e-26	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118070 PE=4 SV=1	[more]

BLAST of Cla97C05G080360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60480.1	8.7e-15	49.37	unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..121
None	No IPR available	PANTHER	PTHR37744	STAR LIPID TRANSFER-LIKE PROTEIN	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080360.2	Cla97C05G080360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane