Cla97C04G070810 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C04G070810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	DNA repair protein recA-like protein 2
Location	Cla97Chr04: 14789287 .. 14790868 (+)
RNA-Seq Expression	Cla97C04G070810
Synteny	Cla97C04G070810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCTTCCTCGCACCTTCACTCTTGCGCTCTTGCCGTCTCAAGCACTTTGAAGCATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGGTCTCGCTTCACTCCTTTTACTTCAGATTCCTTGTCTTAAATTGATATCGGTTGTTCTTGTTGGATTTCAAACATTTTTACTTCTGGGTTTCGTCCGTAATGTCCTCTTCACTGAAATGAGTTAGATATTGGCATATATAGAAGGATAGTTTGTATTATTGTGAATGTGAAAAGGAAGAAATAAAATGAAATGCATTAGATATCGTTCTTGGATAATGGGGCTTTTAAAAGTAGGTTTCTCTTTGTTTTACCTAACAATTTAGTAAGATTGTACAAATGGGTTTTCCCAGTTTTGTTTTTCTTATGACCCTTTTCCCTTTTGTTCCAAAAGGAAAGGAGAGATGTGATCAGCTGTGTGGGTATGGATGCTTGTCAGTTTTCCTCACTAGGTAAAAGGCAACAAGCCAGAAATCGCTTTCTTTGTATTTTGTTAGTTACATAAGAGATGCCCAATTGATGGTTTATGTTTATCCTGATACACCATAATTTGTGTTTGTAAAATTTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAATGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGGTTGCAGAGGTTTTTCTGCTCCCGATATGCACCTGTTATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGTGAATGACTGCAAGTTGAAATTTTATTCTGCCATATATTTGATTGATTTTTTTACGTATTTTCCAGAATTGGAATGTGTTTGCAGTTAAAGTTCATTCCTGTTACTTCACTACCTTTCCATTTTACGTCACCCACATATTCAGTGCAGTATTGGTTTTAACATAATAAGGTCTCGTGGTCTATGATCTTTTGTTATCTTCGTGCCCTGTAGGAGAGATTTACTTATGTAGATTGTGAACCTTGCCATATTTTGTTTTGTTGCATGTTATTTGTTTATCATATTTCATTTCTTCACCTTGTTAGTCAATTTCTTTTACTTTTAACTGTTTCCATTTATTTTTCATCAAGAGGACCTTAGTTAAGTGTTCATTCAGAGGACCTTAGTTAGGAGTTCATCCAAAGCCCAAAGGACCCTAGTTAAGGCTAAGAGCCAAGAGGACAAGGTAATGGATTATCTTGATGCCGGAAGTTAGGAGTTAGAGGTGATTCTAAACAAGGGCGATATTCTCACCCAACGAGGTTATTTGGAATTGGTCTGCCCTGTGGTTGGTAATATACTGGATTTTGGTAATAATTTGTATGTTGAAATTTTGGGTTTGATTCCTAGGGAAGTTTTTCGCAGGTTCTTGGTTTCTAGCATCAAAATGGTGGTGCATTTCTTGCCTTCTTTGTGGTCGTATAGGCTGCCTTCTGTTATCTTGAGCTTCTTGCTGATTGTTGTTGTTTCTTGTCTTGACCTTGATAGTTTGGTAGCCTTGTGA

mRNA sequence

ATGTCATTCTTCCTCGCACCTTCACTCTTGCGCTCTTGCCGTCTCAAGCACTTTGAAGCATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGGAAAGGAGAGATGTGATCAGCTGTGTGGGTATGGATGCTTGTCAGTTTTCCTCACTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAATGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGGTTGCAGAGGTTTTTCTGCTCCCGATATGCACCTGTTATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGAGTTAGAGGTGATTCTAAACAAGGGCGATATTCTCACCCAACGAGGTTATTTGGAATTGGTCTGCCCTGTGGTTGGTAATATACTGGATTTTGGTAATAATTTGTATGTTGAAATTTTGGGTTTGATTCCTAGGGAAGTTTTTCGCAGGTTCTTGGTTTCTAGCATCAAAATGGTGGTGCATTTCTTGCCTTCTTTGTGGTCGTATAGGCTGCCTTCTGTTATCTTGAGCTTCTTGCTGATTGTTGTTGTTTCTTGTCTTGACCTTGATAGTTTGGTAGCCTTGTGA

Coding sequence (CDS)

ATGTCATTCTTCCTCGCACCTTCACTCTTGCGCTCTTGCCGTCTCAAGCACTTTGAAGCATCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCCAGGAAAGGAGAGATGTGATCAGCTGTGTGGGTATGGATGCTTGTCAGTTTTCCTCACTAGTTGATGTTTCGGAGTTCGAATGTGATAAGCTTAATGATGATACTAGAACAACAGAGAAAGATGCTGCACTACGTTTGGCAATCTCTCAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGGTTGCAGAGGTTTTTCTGCTCCCGATATGCACCTGTTATTTCTACTGGATCATTAAAGCTTGACATTGCTCTTGGGATTGGAGGATTACCTAAGGAGTTAGAGGTGATTCTAAACAAGGGCGATATTCTCACCCAACGAGGTTATTTGGAATTGGTCTGCCCTGTGGTTGGTAATATACTGGATTTTGGTAATAATTTGTATGTTGAAATTTTGGGTTTGATTCCTAGGGAAGTTTTTCGCAGGTTCTTGGTTTCTAGCATCAAAATGGTGGTGCATTTCTTGCCTTCTTTGTGGTCGTATAGGCTGCCTTCTGTTATCTTGAGCTTCTTGCTGATTGTTGTTGTTTCTTGTCTTGACCTTGATAGTTTGGTAGCCTTGTGA

Protein sequence

MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECDKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPKELEVILNKGDILTQRGYLELVCPVVGNILDFGNNLYVEILGLIPREVFRRFLVSSIKMVVHFLPSLWSYRLPSVILSFLLIVVVSCLDLDSLVAL

Homology

[Close]

BLAST of Cla97C04G070810 vs. NCBI nr
Match: XP_038883413.1 (DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-54
Identity = 113/124 (91.13%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECD 60
           MSFFLAP L RSCRLKHF+ASRFSSLFHSLRQ RRDVISC GMDAC FSSLVDVSEFECD
Sbjct: 1   MSFFLAPPLFRSCRLKHFQASRFSSLFHSLRQGRRDVISCGGMDACLFSSLVDVSEFECD 60

Query: 61  KLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIG 120
           K+NDDTRTTEKDA LR AISQLAGDFGKESML LQRFF SRYAPVISTGSLKLDIALGIG
Sbjct: 61  KINDDTRTTEKDATLRSAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDIALGIG 120

Query: 121 GLPK 125
           GLPK
Sbjct: 121 GLPK 124

[Close]

BLAST of Cla97C04G070810 vs. NCBI nr
Match: XP_023544350.1 (DNA repair protein recA homolog 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-48
Identity = 102/126 (80.95%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQE--RRDVISCVGMDACQFSSLVDVSEFE 60
           M FFLAPS+ RSCRLKHFEA+R SSLF+++R+   RRDV+SC+G+DAC FSSLVDVSEFE
Sbjct: 1   MPFFLAPSVFRSCRLKHFEATRLSSLFYAIRRHKGRRDVLSCLGLDACHFSSLVDVSEFE 60

Query: 61  CDKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALG 120
           CDKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALG
Sbjct: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120

Query: 121 IGGLPK 125
           IGGLPK
Sbjct: 121 IGGLPK 126

[Close]

BLAST of Cla97C04G070810 vs. NCBI nr
Match: KAG7033496.1 (DNA repair protein recA-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-48
Identity = 102/125 (81.60%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLR-QERRDVISCVGMDACQFSSLVDVSEFEC 60
           M FFLAPS+ RSC LKHFEA+R SSLF+++R + RRDVISC+G+DAC FSSLVDVSEFEC
Sbjct: 1   MPFFLAPSVFRSCHLKHFEATRLSSLFYAIRHKRRRDVISCLGLDACHFSSLVDVSEFEC 60

Query: 61  DKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGI 120
           DKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPK 125
           GGLPK
Sbjct: 121 GGLPK 125

[Close]

BLAST of Cla97C04G070810 vs. NCBI nr
Match: XP_022967812.1 (DNA repair protein recA homolog 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 202.2 bits (513), Expect = 4.6e-48
Identity = 102/125 (81.60%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQE-RRDVISCVGMDACQFSSLVDVSEFEC 60
           M FFLAPS+ RSCRLK+FEA+R SSLF+++R + RRDVISC G+DAC FSSLVDVSEFEC
Sbjct: 1   MPFFLAPSVFRSCRLKYFEATRLSSLFYAIRHKGRRDVISCFGLDACHFSSLVDVSEFEC 60

Query: 61  DKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGI 120
           DKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPK 125
           GGLPK
Sbjct: 121 GGLPK 125

[Close]

BLAST of Cla97C04G070810 vs. NCBI nr
Match: XP_022928640.1 (DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 3.0e-47
Identity = 100/125 (80.00%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLR-QERRDVISCVGMDACQFSSLVDVSEFEC 60
           M FFLA S+ RSCRLKHFE +R SSLF+++R + RRDVI+C+G+DAC FSSLVDVSEFEC
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHKRRRDVINCLGLDACHFSSLVDVSEFEC 60

Query: 61  DKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGI 120
           DKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPK 125
           GGLPK
Sbjct: 121 GGLPK 125

[Close]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot
Match: Q8RY99 (DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.9e-21
Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 22  RFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECDKLNDDTRTTEKDAALRLAISQ 81
           RF S    L   RR V++C G +    SSLV+ S+ E D++ DD +  EKD AL LA+SQ
Sbjct: 14  RFFSYLSQL-NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQ 73

Query: 82  LAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           L+GDF K+S L LQRF+  R   VISTGSL LD+ALG+GGLPK
Sbjct: 74  LSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115

[Close]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 69  TEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           ++K+ AL+ A+ Q+   FGK S+++L R    R  PV STGS  LD+ALG+GGLPK
Sbjct: 56  SKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK 111

[Close]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot
Match: Q05358 (Protein RecA OS=Legionella pneumophila OX=446 GN=recA PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 71  KDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           K  AL  A+SQ+   FGK S++ +     SR    ISTGSL LDIALGIGGLPK
Sbjct: 5   KQKALSAAVSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58

[Close]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot
Match: Q5X4B5 (Protein RecA OS=Legionella pneumophila (strain Paris) OX=297246 GN=recA PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 71  KDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           K  AL  A+SQ+   FGK S++ +     SR    ISTGSL LDIALGIGGLPK
Sbjct: 5   KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58

[Close]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot
Match: A5ICV8 (Protein RecA OS=Legionella pneumophila (strain Corby) OX=400673 GN=recA PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 71  KDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           K  AL  A+SQ+   FGK S++ +     SR    ISTGSL LDIALGIGGLPK
Sbjct: 5   KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 58

[Close]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL
Match: A0A6J1HRU9 (DNA repair protein recA homolog 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111467217 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48
Identity = 102/125 (81.60%), Postives = 115/125 (92.00%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQE-RRDVISCVGMDACQFSSLVDVSEFEC 60
           M FFLAPS+ RSCRLK+FEA+R SSLF+++R + RRDVISC G+DAC FSSLVDVSEFEC
Sbjct: 1   MPFFLAPSVFRSCRLKYFEATRLSSLFYAIRHKGRRDVISCFGLDACHFSSLVDVSEFEC 60

Query: 61  DKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGI 120
           DKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPK 125
           GGLPK
Sbjct: 121 GGLPK 125

[Close]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL
Match: A0A6J1ELF3 (DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435486 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 100/126 (79.37%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLRQE--RRDVISCVGMDACQFSSLVDVSEFE 60
           M FFLA S+ RSCRLKHFE +R SSLF+++R +  RRDVI+C+G+DAC FSSLVDVSEFE
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHQKRRRDVINCLGLDACHFSSLVDVSEFE 60

Query: 61  CDKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALG 120
           CDKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALG
Sbjct: 61  CDKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALG 120

Query: 121 IGGLPK 125
           IGGLPK
Sbjct: 121 IGGLPK 126

[Close]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL
Match: A0A6J1ES72 (DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435486 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 100/125 (80.00%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MSFFLAPSLLRSCRLKHFEASRFSSLFHSLR-QERRDVISCVGMDACQFSSLVDVSEFEC 60
           M FFLA S+ RSCRLKHFE +R SSLF+++R + RRDVI+C+G+DAC FSSLVDVSEFEC
Sbjct: 1   MPFFLASSVFRSCRLKHFEVTRLSSLFYAIRHKRRRDVINCLGLDACHFSSLVDVSEFEC 60

Query: 61  DKLNDDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGI 120
           DKL+DDTRTTEKDAALRLA++QLAG+FGKESML LQRFF SR APVISTGSLKLD+ALGI
Sbjct: 61  DKLSDDTRTTEKDAALRLAVTQLAGEFGKESMLCLQRFFSSRNAPVISTGSLKLDLALGI 120

Query: 121 GGLPK 125
           GGLPK
Sbjct: 121 GGLPK 125

[Close]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL
Match: A0A5A7VKJ2 (DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001200 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 98/121 (80.99%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 4   FLAPSLLRSCRLKHFEASRFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECDKLN 63
           FLA SL RSCRLKHFEASRFSSLFH L Q RRDVISC+G+DAC FSSLVDV E+ECD LN
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLN 62

Query: 64  DDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLP 123
           DDT+TTEKD AL  AIS++A DFGKES L+LQR F SRYA VISTGSLKLDIALGIGGLP
Sbjct: 63  DDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLP 122

Query: 124 K 125
           K
Sbjct: 123 K 123

[Close]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL
Match: A0A1S3CNF8 (DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502456 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 98/121 (80.99%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 4   FLAPSLLRSCRLKHFEASRFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECDKLN 63
           FLA SL RSCRLKHFEASRFSSLFH L Q RRDVISC+G+DAC FSSLVDV E+ECD LN
Sbjct: 3   FLAHSLFRSCRLKHFEASRFSSLFHFLGQGRRDVISCMGIDACHFSSLVDVWEYECDMLN 62

Query: 64  DDTRTTEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLP 123
           DDT+TTEKD AL  AIS++A DFGKES L+LQR F SRYA VISTGSLKLDIALGIGGLP
Sbjct: 63  DDTKTTEKDTALHSAISRVAADFGKESKLFLQRSFSSRYAHVISTGSLKLDIALGIGGLP 122

Query: 124 K 125
           K
Sbjct: 123 K 123

[Close]

BLAST of Cla97C04G070810 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 22  RFSSLFHSLRQERRDVISCVGMDACQFSSLVDVSEFECDKLNDDTRTTEKDAALRLAISQ 81
           RF S    L   RR V++C G +    SSLV+ S+ E D++ DD +  EKD AL LA+SQ
Sbjct: 14  RFFSYLSQL-NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQ 73

Query: 82  LAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           L+GDF K+S L LQRF+  R   VISTGSL LD+ALG+GGLPK
Sbjct: 74  LSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115

[Close]

BLAST of Cla97C04G070810 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 69  TEKDAALRLAISQLAGDFGKESMLWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           ++K+ AL+ A+ Q+   FGK S+++L R    R  PV STGS  LD+ALG+GGLPK
Sbjct: 56  SKKEIALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK 111

[Close]

BLAST of Cla97C04G070810 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 0


Query: 92  LWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           ++L R    R  PV STGS  LD+ALG+GGLPK
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPK 33

[Close]

BLAST of Cla97C04G070810 vs. TAIR 10
Match: AT3G32920.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 4.3e-04
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 0


Query: 92  LWLQRFFCSRYAPVISTGSLKLDIALGIGGLPK 125
           ++L R    R  PV STGS  LD+ALG+GGLPK
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPK 33

The following BLAST results are available for this feature:

BLAST of Cla97C04G070810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883413.1	5.6e-54	91.13	DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida]	[more]
XP_023544350.1	1.2e-48	80.95	DNA repair protein recA homolog 2, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7033496.1	2.0e-48	81.60	DNA repair protein recA-like 2, mitochondrial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022967812.1	4.6e-48	81.60	DNA repair protein recA homolog 2, mitochondrial [Cucurbita maxima]	[more]
XP_022928640.1	3.0e-47	80.00	DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucurbita moschata]	[more]

BLAST of Cla97C04G070810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RY99	2.9e-21	54.37	DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9ZUP2	2.2e-08	50.00	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q05358	2.6e-06	55.56	Protein RecA OS=Legionella pneumophila OX=446 GN=recA PE=3 SV=1	[more]
Q5X4B5	3.4e-06	55.56	Protein RecA OS=Legionella pneumophila (strain Paris) OX=297246 GN=recA PE=3 SV=...	[more]
A5ICV8	3.4e-06	55.56	Protein RecA OS=Legionella pneumophila (strain Corby) OX=400673 GN=recA PE=3 SV=...	[more]

BLAST of Cla97C04G070810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRU9	2.2e-48	81.60	DNA repair protein recA homolog 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ELF3	1.4e-47	79.37	DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1ES72	1.4e-47	80.00	DNA repair protein recA homolog 2, mitochondrial isoform X2 OS=Cucurbita moschat...	[more]
A0A5A7VKJ2	6.6e-45	80.99	DNA repair protein recA-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CNF8	6.6e-45	80.99	DNA repair protein recA homolog 2, mitochondrial isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Cla97C04G070810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10140.1	2.1e-22	54.37	RECA homolog 3	[more]
AT2G19490.1	1.5e-09	50.00	recA DNA recombination family protein	[more]
AT3G32920.1	4.3e-04	57.58	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G32920.2	4.3e-04	57.58	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 74..125 e-value: 1.5E-7 score: 31.2
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 26..124
None	No IPR available	PANTHER	PTHR45900:SF4	DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL	coord: 26..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C04G070810.2	Cla97C04G070810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding