Cla97C03G059370 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G059370
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr03: 8793072 .. 8793461 (-)
RNA-Seq ExpressionCla97C03G059370
SyntenyCla97C03G059370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATCCACACAAAGCAGCCTGATATGATCAGTAACACCACAAATAATTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAACTCCAAAGACCGGGAACAACCCAACTCGAGTCCGGATGGATTCGAGTTGGCCCCAACCCGTCGTGGTTCAAGTCTGGGCAATGACGAGATTTTAGTCTTATCTGGGACCAATAGATCATCGCCATACATAGTGAGAAACAACAGTATCAGGAGGGGAAGTCAAGAAATAAGGGACAAAGAAAATAAATCATCATGGTCGTCGGGATGGAGTGTTTTTCGGTCGTTTGTTTCACCATGTAGGGAGTGTCGAGCTAGCAAGCCCAATGCAGTTCAACCACGTCCCACTCAAAGGCCTTCATCATGA

mRNA sequence

ATGGGAATCCACACAAAGCAGCCTGATATGATCAGTAACACCACAAATAATTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAACTCCAAAGACCGGGAACAACCCAACTCGAGTCCGGATGGATTCGAGTTGGCCCCAACCCGTCGTGGTTCAAGTCTGGGCAATGACGAGATTTTAGTCTTATCTGGGACCAATAGATCATCGCCATACATAGTGAGAAACAACAGTATCAGGAGGGGAAGTCAAGAAATAAGGGACAAAGAAAATAAATCATCATGGTCGTCGGGATGGAGTGTTTTTCGGTCGTTTGTTTCACCATGTAGGGAGTGTCGAGCTAGCAAGCCCAATGCAGTTCAACCACGTCCCACTCAAAGGCCTTCATCATGA

Coding sequence (CDS)

ATGGGAATCCACACAAAGCAGCCTGATATGATCAGTAACACCACAAATAATTGGGTCAACTCTCTTTCCTTTTCTGGCTACTTGAACTCCAAAGACCGGGAACAACCCAACTCGAGTCCGGATGGATTCGAGTTGGCCCCAACCCGTCGTGGTTCAAGTCTGGGCAATGACGAGATTTTAGTCTTATCTGGGACCAATAGATCATCGCCATACATAGTGAGAAACAACAGTATCAGGAGGGGAAGTCAAGAAATAAGGGACAAAGAAAATAAATCATCATGGTCGTCGGGATGGAGTGTTTTTCGGTCGTTTGTTTCACCATGTAGGGAGTGTCGAGCTAGCAAGCCCAATGCAGTTCAACCACGTCCCACTCAAAGGCCTTCATCATGA

Protein sequence

MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSSPDGFELAPTRRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGWSVFRSFVSPCRECRASKPNAVQPRPTQRPSS
Homology
BLAST of Cla97C03G059370 vs. NCBI nr
Match: KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 84/142 (59.15%), Postives = 96/142 (67.61%), Query Frame = 0

Query: 1   MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSSP------------DGFEL-AP 60
           MGIHTK+P M S TT+ WVNSLSFSGYLNSKDRE+P+                GFE   P
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 61  TRRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGWSVFRSFVSP 120
           T RGSS+ +D I       RSSPYIVRNNSIRRGS++IR+++ +S W   W    SFV P
Sbjct: 61  TCRGSSV-SDYI-----GERSSPYIVRNNSIRRGSKKIREEKEESRWRVVW----SFVLP 120

Query: 121 CRECRASKPNAVQPRPTQRPSS 130
           CRECRASKPN VQPRP Q PSS
Sbjct: 121 CRECRASKPNVVQPRPIQGPSS 132

BLAST of Cla97C03G059370 vs. NCBI nr
Match: KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 7.1e-25
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 0

Query: 1   MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSS------------PDGFELAPT 60
           M IH K+P M S+TT+ W+NSLSFSGYLNSKDR+ P+                GFE +PT
Sbjct: 1   MRIHRKKPHM-SSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPT 60

Query: 61  RRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGWSVFRSFVSPC 120
             GSS       V     RSS YIVRNNSI+RGS++I +++++S W SGW +F  FV PC
Sbjct: 61  CGGSS-------VSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRW-SGWRIFWLFVLPC 120

Query: 121 RECRASKPNAVQPRPTQRPS 129
           RECRA KP+ VQPRP Q PS
Sbjct: 121 RECRARKPSVVQPRPIQVPS 131

BLAST of Cla97C03G059370 vs. NCBI nr
Match: KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-17
Identity = 65/144 (45.14%), Postives = 86/144 (59.72%), Query Frame = 0

Query: 1   MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSSPDGFELAPTRR---GSSLGN- 60
           M +H+K    IS+++++   SLSFSG++ SKDR+     PD     P +R   GSS+ N 
Sbjct: 1   MAVHSKTNPDISSSSSSSNYSLSFSGFVTSKDRQ-----PDKIIRTPDQRFEFGSSVANH 60

Query: 61  --DEILVLSGTNRSSPYI------------VRNNSIRRGSQEIRDKENKSSWSSGWSVFR 120
              + LVL         +            VRN+SIRRG + IR++E +S+W SGWSVFR
Sbjct: 61  YGGQSLVLPRPRPEQAQVSCKRQLERDELMVRNHSIRRGGRRIREEEEESTW-SGWSVFR 120

Query: 121 SFVSPCRECRASKPNAVQPRPTQR 127
           SFVSPCRECRASKP  V+ RP QR
Sbjct: 121 SFVSPCRECRASKPAVVEARPVQR 138

BLAST of Cla97C03G059370 vs. NCBI nr
Match: XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 7.9e-16
Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 0

Query: 1   MGIHTK---QPDMISNTTNNW--VNSLSFSGYLNSKDREQPNS------SPDGFELAPT- 60
           MGIH K   QPD+ S+ ++++   +SLSF+ YL  KDRE PNS         GFE  P  
Sbjct: 8   MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDRE-PNSGGLIKTGDQGFEFGPIC 67

Query: 61  ----RRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGW-SVFRS 120
                 GS  G   I    G       +VRNNSIRRG + I+D+E +SS S+ W SVFRS
Sbjct: 68  CDDHDGGSGSGRRRIRDDDGQRW---LVVRNNSIRRGGRRIKDEEEESSSSTSWSSVFRS 127

Query: 121 FVSPCRECRASKPNAV---QPRPTQR 127
           FVSPCRECRASKP+AV   Q  P QR
Sbjct: 128 FVSPCRECRASKPSAVIEAQAHPIQR 149

BLAST of Cla97C03G059370 vs. ExPASy TrEMBL
Match: A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.9e-30
Identity = 84/142 (59.15%), Postives = 96/142 (67.61%), Query Frame = 0

Query: 1   MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSSP------------DGFEL-AP 60
           MGIHTK+P M S TT+ WVNSLSFSGYLNSKDRE+P+                GFE   P
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 61  TRRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGWSVFRSFVSP 120
           T RGSS+ +D I       RSSPYIVRNNSIRRGS++IR+++ +S W   W    SFV P
Sbjct: 61  TCRGSSV-SDYI-----GERSSPYIVRNNSIRRGSKKIREEKEESRWRVVW----SFVLP 120

Query: 121 CRECRASKPNAVQPRPTQRPSS 130
           CRECRASKPN VQPRP Q PSS
Sbjct: 121 CRECRASKPNVVQPRPIQGPSS 132

BLAST of Cla97C03G059370 vs. ExPASy TrEMBL
Match: A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 0

Query: 1   MGIHTKQPDMISNTTNNWVNSLSFSGYLNSKDREQPNSS------------PDGFELAPT 60
           M IH K+P M S+TT+ W+NSLSFSGYLNSKDR+ P+                GFE +PT
Sbjct: 1   MRIHRKKPHM-SSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPT 60

Query: 61  RRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGWSVFRSFVSPC 120
             GSS       V     RSS YIVRNNSI+RGS++I +++++S W SGW +F  FV PC
Sbjct: 61  CGGSS-------VSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRW-SGWRIFWLFVLPC 120

Query: 121 RECRASKPNAVQPRPTQRPS 129
           RECRA KP+ VQPRP Q PS
Sbjct: 121 RECRARKPSVVQPRPIQVPS 131

BLAST of Cla97C03G059370 vs. ExPASy TrEMBL
Match: A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.8e-16
Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 0

Query: 1   MGIHTK---QPDMISNTTNNW--VNSLSFSGYLNSKDREQPNS------SPDGFELAPT- 60
           MGIH K   QPD+ S+ ++++   +SLSF+ YL  KDRE PNS         GFE  P  
Sbjct: 8   MGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDRE-PNSGGLIKTGDQGFEFGPIC 67

Query: 61  ----RRGSSLGNDEILVLSGTNRSSPYIVRNNSIRRGSQEIRDKENKSSWSSGW-SVFRS 120
                 GS  G   I    G       +VRNNSIRRG + I+D+E +SS S+ W SVFRS
Sbjct: 68  CDDHDGGSGSGRRRIRDDDGQRW---LVVRNNSIRRGGRRIKDEEEESSSSTSWSSVFRS 127

Query: 121 FVSPCRECRASKPNAV---QPRPTQR 127
           FVSPCRECRASKP+AV   Q  P QR
Sbjct: 128 FVSPCRECRASKPSAVIEAQAHPIQR 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0057006.11.6e-2959.15hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK2643... [more]
KGN64696.17.1e-2552.86hypothetical protein Csa_013090 [Cucumis sativus][more]
KAG6573282.12.5e-1745.14hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022139818.17.9e-1648.63uncharacterized protein LOC111010640 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DS797.9e-3059.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LXF93.4e-2552.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1[more]
A0A6J1CGL73.8e-1648.63uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G059370.1Cla97C03G059370.1mRNA