Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTTTGGCTTTCAAAATTCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGACTTCAGAGACCAGAAAACTTGTAATTAGCAATGGGGGAGAGATTGAGAGTGAAAAGACAGTGGCCTTCCAGTTCTTTCCTGGATACGGCGGCGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGCGGGTTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGTGGCGGCGGAGGGTTTGGCGGTGTTGGTGACGGTGGCGCTTTAGGTGGCGGAGCTGGCGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTTCCTTGA
mRNA sequence
ATGGGTTCTTTGGCTTTCAAAATTCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGACTTCAGAGACCAGAAAACTTGTAATTAGCAATGGGGGAGAGATTGAGAGTGAAAAGACAGTGGCCTTCCAGTTCTTTCCTGGATACGGCGGCGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGCGGGTTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGTGGCGGCGGAGGGTTTGGCGGTGTTGGTGACGGTGGCGCTTTAGGTGGCGGAGCTGGCGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTTCCTTGA
Coding sequence (CDS)
ATGGGTTCTTTGGCTTTCAAAATTCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGACTTCAGAGACCAGAAAACTTGTAATTAGCAATGGGGGAGAGATTGAGAGTGAAAAGACAGTGGCCTTCCAGTTCTTTCCTGGATACGGCGGCGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGCGGGTTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGTGGCGGCGGAGGGTTTGGCGGTGTTGGTGACGGTGGCGCTTTAGGTGGCGGAGCTGGCGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTTCCTTGA
Protein sequence
MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGLP
Homology
BLAST of Cla97C03G055780 vs. NCBI nr
Match:
XP_011648421.1 (glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothetical protein Csa_013856 [Cucumis sativus])
HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32
Identity = 111/121 (91.74%), Postives = 113/121 (93.39%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGS AFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGGAGGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. NCBI nr
Match:
XP_038895952.1 (glycine-rich cell wall structural protein-like [Benincasa hispida])
HSP 1 Score: 147.5 bits (371), Expect = 7.4e-32
Identity = 111/123 (90.24%), Postives = 115/123 (93.50%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGSLAFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+AFQFFPG+GGGLGGGGG+GG
Sbjct: 1 MGSLAFKFLWLVVLCALIWASEPRKLVITNGGEIESEKTLAFQFFPGFGGGLGGGGGYGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGA--LGGGAGGGAGGGFGG 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGGAGGGFGG
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGGGILGGGAGGGAGGGFGG 120
Query: 121 GLP 122
GLP
Sbjct: 121 GLP 123
BLAST of Cla97C03G055780 vs. NCBI nr
Match:
XP_008446362.1 (PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056845.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa] >TYJ99348.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa])
HSP 1 Score: 144.8 bits (364), Expect = 4.8e-31
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGSLAFK LWLVVLCALI SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG GGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. NCBI nr
Match:
XP_022140151.1 (glycine-rich protein 5-like [Momordica charantia])
HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
Query: 3 SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGF 62
+LA K+LWLV+L ALI SE RK ++ NGG+I E+EKT+ FQFFPG+GGGLGGGGGF
Sbjct: 5 ALASKVLWLVLLGALICASEPRK-IVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 64
Query: 63 GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGG 122
GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG+GGGFGG
Sbjct: 65 GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 124
BLAST of Cla97C03G055780 vs. NCBI nr
Match:
XP_022994117.1 (glycine-rich protein 5 [Cucurbita maxima])
HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 99/124 (79.84%), Postives = 102/124 (82.26%), Query Frame = 0
Query: 1 MGS-LAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFG 60
MGS LA K LWL+VL ALI SE R+LV GG SEKT FQFFPGYGGGLGGGGGFG
Sbjct: 1 MGSFLALKFLWLLVLFALICASEPRRLV-GTGGGFGSEKTGYFQFFPGYGGGLGGGGGFG 60
Query: 61 GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGA--LGGGAGGGAGGGFG 120
GGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGG G G+ LGGGAGGGAGGGFG
Sbjct: 61 GGGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGGSGSGVLGGGAGGGAGGGFG 120
Query: 121 GGLP 122
GGLP
Sbjct: 121 GGLP 123
BLAST of Cla97C03G055780 vs. ExPASy TrEMBL
Match:
A0A0A0LS00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 5.5e-33
Identity = 111/121 (91.74%), Postives = 113/121 (93.39%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGS AFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSSAFKYLWLVVLCALIWASEPRKLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGGAGGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. ExPASy TrEMBL
Match:
A0A5D3BMG3 (Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005650 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGSLAFK LWLVVLCALI SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG GGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. ExPASy TrEMBL
Match:
E5GC63 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGSLAFK LWLVVLCALI SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG GGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. ExPASy TrEMBL
Match:
A0A1S3BEW4 (glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC103489125 PE=4 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 1 MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGG 60
MGSLAFK LWLVVLCALI SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGG
Sbjct: 1 MGSLAFKYLWLVVLCALICASEPRRLVITNGGEIESEKTLPFQFFPGYGGGLGGGGGFGG 60
Query: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGGGL 120
GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG GGGFGGGL
Sbjct: 61 GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGGGL 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Cla97C03G055780 vs. ExPASy TrEMBL
Match:
A0A6J1CF04 (glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 8.8e-23
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 0
Query: 3 SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGF 62
+LA K+LWLV+L ALI SE RK ++ NGG+I E+EKT+ FQFFPG+GGGLGGGGGF
Sbjct: 5 ALASKVLWLVLLGALICASEPRK-IVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 64
Query: 63 GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGGGAGGGFGG 122
GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G GG LGGGAGGG+GGGFGG
Sbjct: 65 GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 124
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_011648421.1 | 1.1e-32 | 91.74 | glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothet... | [more] |
XP_038895952.1 | 7.4e-32 | 90.24 | glycine-rich cell wall structural protein-like [Benincasa hispida] | [more] |
XP_008446362.1 | 4.8e-31 | 90.08 | PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 ... | [more] |
XP_022140151.1 | 1.8e-22 | 79.67 | glycine-rich protein 5-like [Momordica charantia] | [more] |
XP_022994117.1 | 1.4e-19 | 79.84 | glycine-rich protein 5 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LS00 | 5.5e-33 | 91.74 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1 | [more] |
A0A5D3BMG3 | 2.3e-31 | 90.08 | Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695... | [more] |
E5GC63 | 2.3e-31 | 90.08 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A1S3BEW4 | 2.3e-31 | 90.08 | glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC10348912... | [more] |
A0A6J1CF04 | 8.8e-23 | 79.67 | glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |