Cla97C03G054960 (gene) Watermelon (97103) v2.5

Overview
NameCla97C03G054960
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Descriptionthylakoid lumenal 17.9 kDa protein, chloroplastic
LocationCla97Chr03: 3968756 .. 3971556 (-)
RNA-Seq ExpressionCla97C03G054960
SyntenyCla97C03G054960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGTACGCTCTGAATCTTGTAATTTCAACTGTTGTTCAATTTTGTTACTAGTTCATAGTTTCTGTGTGCCCCAAATTTGCATTGGTTTTCTGAATTGATTCATTGACAATGTAGCTAACTGCCTCTTTGGGGGTTTCCCCCAATGTTGTTCACCTTAATGTTGCAGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGGTTTTAGTTCTCTGAAAGCCGAGCATGATTTGCTTGTATGTTCTTCTACAAAATTGGTTTCTCTTGGTGGTGTTGCTTTTTCATGTTCCTGCTCTACGTTTATTTGCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTAATTGAATTGAACTTATCAATTGCAGATTTGAACTTTGCATTTCTGATTGATATACATATTTTAATTAGACTGCTGAGGTGAGATGAGAATGGATTCTATTTACCATAGTGACTGTTGGCTTATTCTTTTGAATTCAATAGTGCTTTAACATAGATAAAGTAGTAAATCCTTGGTTGAGTTATAAAGAAGTTTGATTTTTGAATTCTCAAAAATAGATAATAGTTCCTTAAAGTTTCATTGTTATATCTATAGGTTCTTTTAACTTTATAAAGGATCTATGTGGCTGCACATGGCTTGGTTATGACTATAAAAAATATTTAACCTACAAATTTTGGGGAAAATTGATACTCCTGTGGTTTGAATTTTTATATATTGATCAACCCTAAAGTAGTAGAATGACATCTTCGTGCTCTAGTCATAGCCAACTAAATCTTTTTATATCTCTTAATATTTCAAATATCGTTAATCGAATTAACTTTGTATGTTTTTAGTGAAGTATATTTTGCTTTGATGTTGAATTTACATCATTTATCTATCAAGAAGTATTAATATATCAACATAGATGCATATATTTTAGGGAAAATATTAATTTATACCCATAAACTATAGTAGCTATCAATTTAAATCCTGAACTAATAATTGTACTAATTTAAACCCTCAACTTTTGTAAGCGTATCAATTTACACCTTCCATTATGTGTCGTTTGAAAAAAACCTTGTGTTGTAATCGTATCAACTACACTCCCAAACTTTTATAAATGTATCAATTTAGACTCTTAGACAAAATTTCTTTTGAAAATAGTCAATGCATTTACTCTAATTGTCCATTATATAAAACAACTTTTGAAGAAGTCTACACACGTTTGAAAAATAATACACAAATAATTTTCAAATTAGGTAATCGTCAATCAGGGTCTTAGAGATTTGTTGGTTTATGAAAATTTAAAAGTTGAGTTGACTTACATTAAAATTTCACTCAATATTGGTCAAATGAAACTTAGAGGAGGGTGTAAATCGATACATTTATGAAAGTTCAAGGTTAAAATTGATATAATTATTAGTTTAGGGTTTTAATTGATACAACCTCAAAAATTTAGGGGTATAAATTGATATTTATCCTATATTTTATATTGAAAAAAAGCGTCTCCCAAATGTGTTCGTGTCCTAATATTTAAGAAATTGATGGGTCACCGTGTCCGTGTTTGTGCTTCTCAGTTCGTGGATTTATGTGATTCAAAATCAAAAGTTTGAGGAATTATTTTGTTAAACACTTGTTAAGTTCCAGAACCAATGAAATAGAACTTAGAAAGGGTAGAGACCTATATCGATACCATTTAGGCGTTAAAATGTTGAGCCTTTCACGTAAAAGAGAGTATGGTTATGGCTTATTGAACAAGATGCATTTATGATTATGACAGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAGTACAAATCCTGCTCTTTTTCTTTTTTCTTTATTTTCTTCCCTTTCATTTTTACTCAATCTGATTAAACTCATTTTCAGCCGCAAATATTTTTGCCTTAAATTATATATATAAGAATGTTTCTACTTCATTCCCATCCAGAATTATTCTGTTGATATTTTATGAGTTATTTATACCAACTAATGGTCGGAAATTATGTTTTAAATACTCAAAATCTATTAGAGTTTAGCTCAAGTTATTGAAGTTGTACTAAACATGGCCCAACAATTTGTGTGTGTGTGTATATATATATATATATTATATATATATATATCCTAAATTCATAACTTAAAAGTTTGTTTTTATAATGAATAATAGAGGGTAGATTTTTTATAATGGTTTTTTAATAGTTGGTTTATTTATTTTTTTGTTTTTAGTTGA

mRNA sequence

ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGA

Coding sequence (CDS)

ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGA

Protein sequence

MSSLQFRPPLVSPWKKKKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDDY
Homology
BLAST of Cla97C03G054960 vs. NCBI nr
Match: XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119
Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPW-KKKKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSP 60
           MSSLQFRPPLVSPW KKKKKNQYHSP S PSMAALQNSNHKPI LSH+LSFALS+TLSSP
Sbjct: 1   MSSLQFRPPLVSPWKKKKKKNQYHSPNSFPSMAALQNSNHKPIFLSHILSFALSITLSSP 60

Query: 61  FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120
           FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP
Sbjct: 61  FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120

Query: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
           LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD
Sbjct: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180

Query: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL+WYSPTF+SMDD
Sbjct: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMDD 230

BLAST of Cla97C03G054960 vs. NCBI nr
Match: XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
           MSSLQFRPPLVSPWKKK    KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

BLAST of Cla97C03G054960 vs. NCBI nr
Match: XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSLQFRP LVSPWKKK     KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Cla97C03G054960 vs. NCBI nr
Match: XP_022137359.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica charantia])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKKNQYHSP----ASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSL+F PPLVSPWKKKKK   HSP     SLPSMAALQNS+ KPI+LSHLLSFALSVTL
Sbjct: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
           KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232

BLAST of Cla97C03G054960 vs. NCBI nr
Match: KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 5.2e-103
Identity = 196/234 (83.76%), Postives = 210/234 (89.74%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKKNQYHSPASL-----PSMAALQNSNHKPIVLSHLLSFALSVT 60
           MSSL FRP LVSPWKKKK N     A L     PSMAAL N NHKPI +SHLLSFALS+T
Sbjct: 1   MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAFPL+IPE+++GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Cla97C03G054960 vs. ExPASy Swiss-Prot
Match: Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.0e-66
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 0

Query: 36  NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
           +S   PI +L  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK + TGL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 96  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
           KI PCPSTNP CVSTNP SSSF+FPL IPE  + +PI+KL+EAI+ TQ+NPK  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 216 IDQLDWYSPTFESMD 229
           IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225

BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match: A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
           MSSLQFRPPLVSPWKKK    KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1   MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60

Query: 61  SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
           SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61  SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120

Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
           FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180

Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232

BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match: A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSLQFRP LVSPWKKK     KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match: A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSLQFRP LVSPWKKK     KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1   MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           +SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61  TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233

BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match: A0A6J1C708 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKKNQYHSP----ASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
           MSSL+F PPLVSPWKKKKK   HSP     SLPSMAALQNS+ KPI+LSHLLSFALSVTL
Sbjct: 1   MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60

Query: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
           SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL  GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61  SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120

Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
           AFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180

Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
           KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232

BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match: A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 197/234 (84.19%), Postives = 210/234 (89.74%), Query Frame = 0

Query: 1   MSSLQFRPPLVSPWKKKKKNQYHSPASL-----PSMAALQNSNHKPIVLSHLLSFALSVT 60
           MSSL FRP LVSPWKKKKKN     A L     PSMAAL N NHKPI +SHLLSFALS+T
Sbjct: 1   MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60

Query: 61  LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
           L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61  LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120

Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
           FAF L+IPE+F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180

Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
           V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234

BLAST of Cla97C03G054960 vs. TAIR 10
Match: AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )

HSP 1 Score: 251.5 bits (641), Expect = 6.4e-67
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 0

Query: 36  NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
           +S   PI +L  L+SFAL+++L+S  P+LAIPSL+S S PL  TTPF+QSK + TGL NG
Sbjct: 34  SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93

Query: 96  KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
           KI PCPSTNP CVSTNP SSSF+FPL IPE  + +PI+KL+EAI+ TQ+NPK  V+EDTP
Sbjct: 94  KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153

Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
           YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213

Query: 216 IDQLDWYSPTFESMD 229
           IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893869.12.3e-11996.52thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida][more]
XP_004154123.13.1e-11692.67thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... [more]
XP_008439847.13.5e-11592.27PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... [more]
XP_022137359.11.9e-10587.07thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica cha... [more]
KAG7012320.15.2e-10383.76Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... [more]
Match NameE-valueIdentityDescription
Q9SW339.0e-6668.21Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Match NameE-valueIdentityDescription
A0A0A0LRK91.5e-11692.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1[more]
A0A5A7UK021.7e-11592.27Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3AZP31.7e-11592.27thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A6J1C7089.3e-10687.07thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica c... [more]
A0A6J1GT702.5e-10384.19thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
Match NameE-valueIdentityDescription
AT4G24930.16.4e-6768.21thylakoid lumenal 17.9 kDa protein, chloroplast [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR037734Thylakoid lumenal 17.9kDa proteinPANTHERPTHR36783THYLAKOID LUMENAL 17.9 KDA PROTEIN, CHLOROPLASTICcoord: 8..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G054960.1Cla97C03G054960.1mRNA