Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGTACGCTCTGAATCTTGTAATTTCAACTGTTGTTCAATTTTGTTACTAGTTCATAGTTTCTGTGTGCCCCAAATTTGCATTGGTTTTCTGAATTGATTCATTGACAATGTAGCTAACTGCCTCTTTGGGGGTTTCCCCCAATGTTGTTCACCTTAATGTTGCAGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGGTTTTAGTTCTCTGAAAGCCGAGCATGATTTGCTTGTATGTTCTTCTACAAAATTGGTTTCTCTTGGTGGTGTTGCTTTTTCATGTTCCTGCTCTACGTTTATTTGCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTAATTGAATTGAACTTATCAATTGCAGATTTGAACTTTGCATTTCTGATTGATATACATATTTTAATTAGACTGCTGAGGTGAGATGAGAATGGATTCTATTTACCATAGTGACTGTTGGCTTATTCTTTTGAATTCAATAGTGCTTTAACATAGATAAAGTAGTAAATCCTTGGTTGAGTTATAAAGAAGTTTGATTTTTGAATTCTCAAAAATAGATAATAGTTCCTTAAAGTTTCATTGTTATATCTATAGGTTCTTTTAACTTTATAAAGGATCTATGTGGCTGCACATGGCTTGGTTATGACTATAAAAAATATTTAACCTACAAATTTTGGGGAAAATTGATACTCCTGTGGTTTGAATTTTTATATATTGATCAACCCTAAAGTAGTAGAATGACATCTTCGTGCTCTAGTCATAGCCAACTAAATCTTTTTATATCTCTTAATATTTCAAATATCGTTAATCGAATTAACTTTGTATGTTTTTAGTGAAGTATATTTTGCTTTGATGTTGAATTTACATCATTTATCTATCAAGAAGTATTAATATATCAACATAGATGCATATATTTTAGGGAAAATATTAATTTATACCCATAAACTATAGTAGCTATCAATTTAAATCCTGAACTAATAATTGTACTAATTTAAACCCTCAACTTTTGTAAGCGTATCAATTTACACCTTCCATTATGTGTCGTTTGAAAAAAACCTTGTGTTGTAATCGTATCAACTACACTCCCAAACTTTTATAAATGTATCAATTTAGACTCTTAGACAAAATTTCTTTTGAAAATAGTCAATGCATTTACTCTAATTGTCCATTATATAAAACAACTTTTGAAGAAGTCTACACACGTTTGAAAAATAATACACAAATAATTTTCAAATTAGGTAATCGTCAATCAGGGTCTTAGAGATTTGTTGGTTTATGAAAATTTAAAAGTTGAGTTGACTTACATTAAAATTTCACTCAATATTGGTCAAATGAAACTTAGAGGAGGGTGTAAATCGATACATTTATGAAAGTTCAAGGTTAAAATTGATATAATTATTAGTTTAGGGTTTTAATTGATACAACCTCAAAAATTTAGGGGTATAAATTGATATTTATCCTATATTTTATATTGAAAAAAAGCGTCTCCCAAATGTGTTCGTGTCCTAATATTTAAGAAATTGATGGGTCACCGTGTCCGTGTTTGTGCTTCTCAGTTCGTGGATTTATGTGATTCAAAATCAAAAGTTTGAGGAATTATTTTGTTAAACACTTGTTAAGTTCCAGAACCAATGAAATAGAACTTAGAAAGGGTAGAGACCTATATCGATACCATTTAGGCGTTAAAATGTTGAGCCTTTCACGTAAAAGAGAGTATGGTTATGGCTTATTGAACAAGATGCATTTATGATTATGACAGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTAGTACAAATCCTGCTCTTTTTCTTTTTTCTTTATTTTCTTCCCTTTCATTTTTACTCAATCTGATTAAACTCATTTTCAGCCGCAAATATTTTTGCCTTAAATTATATATATAAGAATGTTTCTACTTCATTCCCATCCAGAATTATTCTGTTGATATTTTATGAGTTATTTATACCAACTAATGGTCGGAAATTATGTTTTAAATACTCAAAATCTATTAGAGTTTAGCTCAAGTTATTGAAGTTGTACTAAACATGGCCCAACAATTTGTGTGTGTGTGTATATATATATATATATTATATATATATATATCCTAAATTCATAACTTAAAAGTTTGTTTTTATAATGAATAATAGAGGGTAGATTTTTTATAATGGTTTTTTAATAGTTGGTTTATTTATTTTTTTGTTTTTAGTTGA
mRNA sequence
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGA
Coding sequence (CDS)
ATGAGTTCGCTCCAATTTCGCCCTCCACTGGTTTCGCCATGGAAGAAGAAGAAGAAGAACCAGTACCACTCCCCAGCCTCTCTTCCTTCCATGGCCGCTCTTCAAAATTCAAACCACAAACCCATTGTCCTTTCTCATCTTCTTTCATTTGCCCTTTCTGTAACCCTAAGCTCACCATTTCCTTCTCTCGCAATCCCTTCTCTTAACTCCCTCTCCTCTCCACTTTCTCCCACTACTCCATTTTCTCAATCCAAGAACTTACCAACTGGACTAGAAAACGGGAAAATTATGCCCTGCCCATCAACCAATCCGTCTTGTGTTTCCACAAATCCTAAATCATCTTCTTTTGCATTCCCTTTAAACATTCCTGAGAATTTCAGTGGGAATCCAATTCAGAAGCTGCAGGAAGCAATCCTTGAAACACAGAGGAATCCAAAAATTCAGGTGGTGGAGGATACTCCTTATGGTCAATATTTAGAAGCTGAGGTAGATGGGAACTTTGGGCGAGATGTGATTGAGTTTTTGGTGAAAGGAGATGTGGCTGCATATAGAATCATGGCTACAAAGGTGACTTATGTGTATCCCTTCACAACTGCTTTAGGGGACTCCAAAGGACAGGAAGAACGAATGAGGAAGATCATAGACCAGTTGGATTGGTATTCTCCAACCTTCGAATCCATGGATGACTATTGA
Protein sequence
MSSLQFRPPLVSPWKKKKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDDY
Homology
BLAST of Cla97C03G054960 vs. NCBI nr
Match:
XP_038893869.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida])
HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119
Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPW-KKKKKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLSSP 60
MSSLQFRPPLVSPW KKKKKNQYHSP S PSMAALQNSNHKPI LSH+LSFALS+TLSSP
Sbjct: 1 MSSLQFRPPLVSPWKKKKKKNQYHSPNSFPSMAALQNSNHKPIFLSHILSFALSITLSSP 60
Query: 61 FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120
FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP
Sbjct: 61 FPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFAFP 120
Query: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD
Sbjct: 121 LNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVKGD 180
Query: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL+WYSPTF+SMDD
Sbjct: 181 VAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLNWYSPTFDSMDD 230
BLAST of Cla97C03G054960 vs. NCBI nr
Match:
XP_004154123.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 hypothetical protein Csa_013578 [Cucumis sativus])
HSP 1 Score: 428.7 bits (1101), Expect = 3.1e-116
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
MSSLQFRPPLVSPWKKK KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60
Query: 61 SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61 SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120
Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180
Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232
BLAST of Cla97C03G054960 vs. NCBI nr
Match:
XP_008439847.1 (PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA0055338.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa] >TYJ99264.1 thylakoid lumenal 17.9 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 425.2 bits (1092), Expect = 3.5e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of Cla97C03G054960 vs. NCBI nr
Match:
XP_022137359.1 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica charantia])
HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKNQYHSP----ASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
MSSL+F PPLVSPWKKKKK HSP SLPSMAALQNS+ KPI+LSHLLSFALSVTL
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of Cla97C03G054960 vs. NCBI nr
Match:
KAG7012320.1 (Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 384.8 bits (987), Expect = 5.2e-103
Identity = 196/234 (83.76%), Postives = 210/234 (89.74%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKNQYHSPASL-----PSMAALQNSNHKPIVLSHLLSFALSVT 60
MSSL FRP LVSPWKKKK N A L PSMAAL N NHKPI +SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKNNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAFPL+IPE+++GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFPLSIPESYTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234
BLAST of Cla97C03G054960 vs. ExPASy Swiss-Prot
Match:
Q9SW33 (Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1)
HSP 1 Score: 251.5 bits (641), Expect = 9.0e-66
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 0
Query: 36 NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
+S PI +L L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK + TGL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 96 KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
KI PCPSTNP CVSTNP SSSF+FPL IPE + +PI+KL+EAI+ TQ+NPK V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 216 IDQLDWYSPTFESMD 229
IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225
BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match:
A0A0A0LRK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1)
HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116
Identity = 215/232 (92.67%), Postives = 223/232 (96.12%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK---KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTLS 60
MSSLQFRPPLVSPWKKK KNQYHSP S+PSM+ LQN+NHKPI LSHLLSFALS+TLS
Sbjct: 1 MSSLQFRPPLVSPWKKKDNNNKNQYHSPVSVPSMSTLQNANHKPIFLSHLLSFALSITLS 60
Query: 61 SPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSFA 120
SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPS NPSCVSTNPKSSSFA
Sbjct: 61 SPFPSIAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSANPSCVSTNPKSSSFA 120
Query: 121 FPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVK 180
FPLNIP+NFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV+
Sbjct: 121 FPLNIPDNFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLVR 180
Query: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 GDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 232
BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match:
A0A5A7UK02 (Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004760 PE=4 SV=1)
HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match:
A0A1S3AZP3 (thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484512 PE=4 SV=1)
HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 215/233 (92.27%), Postives = 223/233 (95.71%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKK----KKNQYHSPASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
MSSLQFRP LVSPWKKK KNQYHSP S+PSM+ALQN NHKPI LSHLLSFALS+TL
Sbjct: 1 MSSLQFRPLLVSPWKKKDNNNNKNQYHSPVSVPSMSALQNVNHKPIFLSHLLSFALSITL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
+SPFPS+AIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF
Sbjct: 61 TSPFPSVAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPLNIP+NFSGNPIQKLQEAILETQRNPKIQ+VEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLNIPDNFSGNPIQKLQEAILETQRNPKIQMVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQL WYSPTF+SMDD
Sbjct: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLHWYSPTFDSMDD 233
BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match:
A0A6J1C708 (thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=4 SV=1)
HSP 1 Score: 392.9 bits (1008), Expect = 9.3e-106
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKNQYHSP----ASLPSMAALQNSNHKPIVLSHLLSFALSVTL 60
MSSL+F PPLVSPWKKKKK HSP SLPSMAALQNS+ KPI+LSHLLSFALSVTL
Sbjct: 1 MSSLRFPPPLVSPWKKKKKKNNHSPGSNQTSLPSMAALQNSDQKPILLSHLLSFALSVTL 60
Query: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSSF 120
SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNL GLENGKI PCPSTNP+CVSTNPKSSSF
Sbjct: 61 SSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLQIGLENGKIRPCPSTNPACVSTNPKSSSF 120
Query: 121 AFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
AFPL+IPENF+ NPIQKLQE IL+TQRN KIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV
Sbjct: 121 AFPLSIPENFTENPIQKLQEVILKTQRNAKIQVVEDTPYGQYLEAEVDGNFGRDVIEFLV 180
Query: 181 KGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMD 229
KGDV AYR MATKVTYVYPFTTA GDSKGQEERM+KIID L WYSPTF+SMD
Sbjct: 181 KGDVVAYRTMATKVTYVYPFTTAFGDSKGQEERMKKIIDNLGWYSPTFDSMD 232
BLAST of Cla97C03G054960 vs. ExPASy TrEMBL
Match:
A0A6J1GT70 (thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457250 PE=4 SV=1)
HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 197/234 (84.19%), Postives = 210/234 (89.74%), Query Frame = 0
Query: 1 MSSLQFRPPLVSPWKKKKKNQYHSPASL-----PSMAALQNSNHKPIVLSHLLSFALSVT 60
MSSL FRP LVSPWKKKKKN A L PSMAAL N NHKPI +SHLLSFALS+T
Sbjct: 1 MSSLHFRPALVSPWKKKKKNNQFLSAVLNRTSPPSMAALPNPNHKPIFISHLLSFALSIT 60
Query: 61 LSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENGKIMPCPSTNPSCVSTNPKSSS 120
L+SPFPSLAIPS NSLSSPLSPTTPFSQSK+LP GLENGKI PCPSTNPSCVSTNPKSSS
Sbjct: 61 LTSPFPSLAIPSFNSLSSPLSPTTPFSQSKDLPIGLENGKIRPCPSTNPSCVSTNPKSSS 120
Query: 121 FAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTPYGQYLEAEVDGNFGRDVIEFL 180
FAF L+IPE+F+GNPIQKLQE ILETQRN KIQ+VEDTPYGQY+EAEVDGNFGRDVIEFL
Sbjct: 121 FAFSLSIPESFTGNPIQKLQEVILETQRNAKIQMVEDTPYGQYMEAEVDGNFGRDVIEFL 180
Query: 181 VKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKIIDQLDWYSPTFESMDD 230
V+GDVAAYRIMA KVTYVYPFTTALGDSKGQEERM+KII++LDWYSPTFESM D
Sbjct: 181 VRGDVAAYRIMAAKVTYVYPFTTALGDSKGQEERMKKIIEELDWYSPTFESMVD 234
BLAST of Cla97C03G054960 vs. TAIR 10
Match:
AT4G24930.1 (thylakoid lumenal 17.9 kDa protein, chloroplast )
HSP 1 Score: 251.5 bits (641), Expect = 6.4e-67
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 0
Query: 36 NSNHKPI-VLSHLLSFALSVTLSSPFPSLAIPSLNSLSSPLSPTTPFSQSKNLPTGLENG 95
+S PI +L L+SFAL+++L+S P+LAIPSL+S S PL TTPF+QSK + TGL NG
Sbjct: 34 SSTSPPISLLPKLISFALAISLTSFSPALAIPSLSS-SQPL--TTPFTQSKFVQTGLLNG 93
Query: 96 KIMPCPSTNPSCVSTNPKSSSFAFPLNIPENFSGNPIQKLQEAILETQRNPKIQVVEDTP 155
KI PCPSTNP CVSTNP SSSF+FPL IPE + +PI+KL+EAI+ TQ+NPK V+EDTP
Sbjct: 94 KIRPCPSTNPGCVSTNPTSSSFSFPLTIPETDTQDPIEKLKEAIMSTQKNPKFVVLEDTP 153
Query: 156 YGQYLEAEVD-GNFGRDVIEFLVKGDVAAYRIMATKVTYVYPFTTALGDSKGQEERMRKI 215
YG+Y+EAEV+ G F RDV+EFLVK DV AYR MATKVT+VYPFTTA GDSKGQEER++K+
Sbjct: 154 YGRYVEAEVEGGGFSRDVMEFLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKL 213
Query: 216 IDQLDWYSPTFESMD 229
IDQL WY+PTFESM+
Sbjct: 214 IDQLGWYAPTFESME 225
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893869.1 | 2.3e-119 | 96.52 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Benincasa hispida] | [more] |
XP_004154123.1 | 3.1e-116 | 92.67 | thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis sativus] >KGN64418.1 ... | [more] |
XP_008439847.1 | 3.5e-115 | 92.27 | PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Cucumis melo] >KAA... | [more] |
XP_022137359.1 | 1.9e-105 | 87.07 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 [Momordica cha... | [more] |
KAG7012320.1 | 5.2e-103 | 83.76 | Thylakoid lumenal 17.9 kDa protein, chloroplastic, partial [Cucurbita argyrosper... | [more] |
Match Name | E-value | Identity | Description | |
Q9SW33 | 9.0e-66 | 68.21 | Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LRK9 | 1.5e-116 | 92.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050570 PE=4 SV=1 | [more] |
A0A5A7UK02 | 1.7e-115 | 92.27 | Thylakoid lumenal 17.9 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3AZP3 | 1.7e-115 | 92.27 | thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A6J1C708 | 9.3e-106 | 87.07 | thylakoid lumenal 17.9 kDa protein, chloroplastic-like isoform X3 OS=Momordica c... | [more] |
A0A6J1GT70 | 2.5e-103 | 84.19 | thylakoid lumenal 17.9 kDa protein, chloroplastic isoform X2 OS=Cucurbita moscha... | [more] |
Match Name | E-value | Identity | Description | |
AT4G24930.1 | 6.4e-67 | 68.21 | thylakoid lumenal 17.9 kDa protein, chloroplast | [more] |