Cla97C02G043270 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G043270
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	ethylene-responsive transcription factor ERF054-like
Location	Cla97Chr02: 31469375 .. 31469626 (+)
RNA-Seq Expression	Cla97C02G043270
Synteny	Cla97C02G043270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGGAGGGAAATGGCAGAGGCTTGGTTAAATGCGATGCCAGCCGGTTGGGGCCCCGGTAGTCCTGTGTGGGATGATTTGGACACCACCAATAATCTGCTGCTTCAGCCACAGCTTACTTTTGCTAATTCAATACAGCAAGAATCAATTGGCTCTGATCTTCACAGTCAGCCACTCAACTTAACATCAGCTTCACCTTCTTCTTCGTCCTGCCCCATGAAGCCTTTCTTTCTCAAGGATGAAGATTGA

mRNA sequence

ATGGTTTGGAGGGAAATGGCAGAGGCTTGGTTAAATGCGATGCCAGCCGGTTGGGGCCCCGGTAGTCCTGTGTGGGATGATTTGGACACCACCAATAATCTGCTGCTTCAGCCACAGCTTACTTTTGCTAATTCAATACAGCAAGAATCAATTGGCTCTGATCTTCACAGTCAGCCACTCAACTTAACATCAGCTTCACCTTCTTCTTCGTCCTGCCCCATGAAGCCTTTCTTTCTCAAGGATGAAGATTGA

Coding sequence (CDS)

ATGGTTTGGAGGGAAATGGCAGAGGCTTGGTTAAATGCGATGCCAGCCGGTTGGGGCCCCGGTAGTCCTGTGTGGGATGATTTGGACACCACCAATAATCTGCTGCTTCAGCCACAGCTTACTTTTGCTAATTCAATACAGCAAGAATCAATTGGCTCTGATCTTCACAGTCAGCCACTCAACTTAACATCAGCTTCACCTTCTTCTTCGTCCTGCCCCATGAAGCCTTTCTTTCTCAAGGATGAAGATTGA

Protein sequence

MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPLNLTSASPSSSSCPMKPFFLKDED

Homology

[Close]

BLAST of Cla97C02G043270 vs. NCBI nr
Match: XP_038902023.1 (ethylene-responsive transcription factor ERF054-like [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           +VWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQL F NSIQQES GSD+ SQPL
Sbjct: 317 IVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLPFVNSIQQESFGSDIQSQPL 376

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLTSASPSSSSCPMKPFFLKDED
Sbjct: 377 NLTSASPSSSSCPMKPFFLKDED 399

[Close]

BLAST of Cla97C02G043270 vs. NCBI nr
Match: KAG6604804.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLN MPAGWGPGSPVWDDLDTTNNLLLQP L FAN I QES  SDL  Q  
Sbjct: 323 MVWREMAEAWLNVMPAGWGPGSPVWDDLDTTNNLLLQPHLPFANPIHQESFTSDLQMQQF 382

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLT+ SP SSSC MKPFFLKDED
Sbjct: 383 NLTATSP-SSSCSMKPFFLKDED 404

[Close]

BLAST of Cla97C02G043270 vs. NCBI nr
Match: XP_022970714.1 (ethylene-responsive transcription factor ERF054-like [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLN MPAGWGPGSPVWDDLDTTNNLLLQP L FAN I QES  SDL  Q  
Sbjct: 321 MVWREMAEAWLNVMPAGWGPGSPVWDDLDTTNNLLLQPHLPFANPIHQESFTSDLQMQQF 380

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLT+ SP SSSC MKPFFLKDED
Sbjct: 381 NLTATSP-SSSCSMKPFFLKDED 402

[Close]

BLAST of Cla97C02G043270 vs. NCBI nr
Match: KAG7034923.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLN MPAGWGPGSPVWDDLDTTNNLLLQP L FAN I QES  SDL  Q  
Sbjct: 322 MVWREMAEAWLNVMPAGWGPGSPVWDDLDTTNNLLLQPHLPFANPIHQESFTSDLQMQQF 381

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLT+ SP SSSC MKPFFLKDED
Sbjct: 382 NLTATSP-SSSCSMKPFFLKDED 403

[Close]

BLAST of Cla97C02G043270 vs. NCBI nr
Match: XP_031742566.1 (ethylene-responsive transcription factor ERF054 [Cucumis sativus] >KAE8646861.1 hypothetical protein Csa_020736 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 6.2e-30
Identity = 68/83 (81.93%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQL F N IQQ+S          
Sbjct: 320 MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLQFVNPIQQQS---------F 379

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           +LTSASPSSSSCPMKPFFLKDED
Sbjct: 380 DLTSASPSSSSCPMKPFFLKDED 393

[Close]

BLAST of Cla97C02G043270 vs. ExPASy Swiss-Prot
Match: Q9M0J3 (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana OX=3702 GN=ERF054 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-07
Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 6   MAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPLNLTSA 65
           MAEAW NA+ +GWGP SP+WDDLD+                          S   +  S+
Sbjct: 246 MAEAWYNAITSGWGPESPLWDDLDS--------------------------SHQFSSESS 292

Query: 66  SPSSSSCPMKPFF 79
           S S  SCPM+PFF
Sbjct: 306 SSSPLSCPMRPFF 292

[Close]

BLAST of Cla97C02G043270 vs. ExPASy Swiss-Prot
Match: Q9SKT1 (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana OX=3702 GN=ERF053 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 4.6e-04
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 0


Query: 7   AEAWLNAMPAGWGPGSPVWDD 28
           AEAW NA+P  WGPGSP+WDD
Sbjct: 293 AEAWFNAIPEEWGPGSPLWDD 313

[Close]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL
Match: A0A6J1I6F6 (ethylene-responsive transcription factor ERF054-like OS=Cucurbita maxima OX=3661 GN=LOC111469614 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLN MPAGWGPGSPVWDDLDTTNNLLLQP L FAN I QES  SDL  Q  
Sbjct: 321 MVWREMAEAWLNVMPAGWGPGSPVWDDLDTTNNLLLQPHLPFANPIHQESFTSDLQMQQF 380

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLT+ SP SSSC MKPFFLKDED
Sbjct: 381 NLTATSP-SSSCSMKPFFLKDED 402

[Close]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL
Match: A0A0A0KG68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128610 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.0e-30
Identity = 68/83 (81.93%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQL F N IQQ+S          
Sbjct: 406 MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLQFVNPIQQQS---------F 465

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           +LTSASPSSSSCPMKPFFLKDED
Sbjct: 466 DLTSASPSSSSCPMKPFFLKDED 479

[Close]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL
Match: A0A5A7V8V5 (Ethylene-responsive transcription factor ERF054-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004750 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQL F N IQQ S          
Sbjct: 323 MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLQFVNPIQQPS---------F 382

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           +LTSASPSSSSCPMKPFFLKDED
Sbjct: 383 DLTSASPSSSSCPMKPFFLKDED 396

[Close]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL
Match: A0A5D3C3F0 (Ethylene-responsive transcription factor ERF054-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001140 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 68/83 (81.93%), Postives = 69/83 (83.13%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQL F N IQQ S          
Sbjct: 318 MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLQFVNPIQQPS---------F 377

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           +LTSASPSSSSCPMKPFFLKDED
Sbjct: 378 DLTSASPSSSSCPMKPFFLKDED 391

[Close]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL
Match: A0A6J1G706 (ethylene-responsive transcription factor ERF054-like OS=Cucurbita moschata OX=3662 GN=LOC111451438 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30
Identity = 67/83 (80.72%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 1   MVWREMAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPL 60
           MVWREMAEAWLN MPAGWGPGSPVWDDLDTTNNLLLQP L FAN   QES  SDL  Q  
Sbjct: 321 MVWREMAEAWLNVMPAGWGPGSPVWDDLDTTNNLLLQPHLPFANPTHQESFTSDLQMQQF 380

Query: 61  NLTSASPSSSSCPMKPFFLKDED 84
           NLT+ SP SSSC MKPFFLKDED
Sbjct: 381 NLTATSP-SSSCSMKPFFLKDED 402

[Close]

BLAST of Cla97C02G043270 vs. TAIR 10
Match: AT4G28140.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08
Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 6   MAEAWLNAMPAGWGPGSPVWDDLDTTNNLLLQPQLTFANSIQQESIGSDLHSQPLNLTSA 65
           MAEAW NA+ +GWGP SP+WDDLD+                          S   +  S+
Sbjct: 246 MAEAWYNAITSGWGPESPLWDDLDS--------------------------SHQFSSESS 292

Query: 66  SPSSSSCPMKPFF 79
           S S  SCPM+PFF
Sbjct: 306 SSSPLSCPMRPFF 292

[Close]

BLAST of Cla97C02G043270 vs. TAIR 10
Match: AT2G20880.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 3.3e-05
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 0


Query: 7   AEAWLNAMPAGWGPGSPVWDD 28
           AEAW NA+P  WGPGSP+WDD
Sbjct: 293 AEAWFNAIPEEWGPGSPLWDD 313

The following BLAST results are available for this feature:

BLAST of Cla97C02G043270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902023.1	1.4e-37	92.77	ethylene-responsive transcription factor ERF054-like [Benincasa hispida]	[more]
KAG6604804.1	3.6e-30	81.93	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022970714.1	3.6e-30	81.93	ethylene-responsive transcription factor ERF054-like [Cucurbita maxima]	[more]
KAG7034923.1	3.6e-30	81.93	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_031742566.1	6.2e-30	81.93	ethylene-responsive transcription factor ERF054 [Cucumis sativus] >KAE8646861.1 ...	[more]

BLAST of Cla97C02G043270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0J3	7.6e-07	39.73	Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SKT1	4.6e-04	76.19	Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cla97C02G043270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6F6	1.8e-30	81.93	ethylene-responsive transcription factor ERF054-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KG68	3.0e-30	81.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128610 PE=4 SV=1	[more]
A0A5A7V8V5	6.7e-30	81.93	Ethylene-responsive transcription factor ERF054-like protein OS=Cucumis melo var...	[more]
A0A5D3C3F0	6.7e-30	81.93	Ethylene-responsive transcription factor ERF054-like protein OS=Cucumis melo var...	[more]
A0A6J1G706	6.7e-30	80.72	ethylene-responsive transcription factor ERF054-like OS=Cucurbita moschata OX=36...	[more]

BLAST of Cla97C02G043270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28140.1	5.4e-08	39.73	Integrase-type DNA-binding superfamily protein	[more]
AT2G20880.1	3.3e-05	76.19	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..73
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 1..80
None	No IPR available	PANTHER	PTHR31657:SF19	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G043270.1	Cla97C02G043270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding