Cla97C02G042960 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G042960
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
LocationCla97Chr02: 31232061 .. 31232588 (-)
RNA-Seq ExpressionCla97C02G042960
SyntenyCla97C02G042960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGACGGCCTCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGGCGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGACGATGATGACGACACTCCTATTCTGTTTGCCAGGAATTGAATTCGATCCTTCCTTCTTCTTCTTTTTCTTTAATGTTTTCGACAATTTTCCAGCCCTAGGTGTTGAATAATTGTGAACCAGATGAGATGATTTATTACTGTGATTTTTATTTTTATTTTTTTGAGTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG

mRNA sequence

ATGGCCGCCGACGGCCTCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGGCGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGACGATGATGACGACACTCCTATTCTTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG

Coding sequence (CDS)

ATGGCCGCCGACGGCCTCCTCCGCCCTGTTTACGAGGCCTGCATCGCCGGCTGCGACTCCGAAATCCACCGCCGCCCCTACCACCGCAACTGCGGTTGCGCTCTCCACAAATCCCGCCGTCAACCTCCTCACTGCTCCCATTCCAAGTCCAAATCCGTCTCCTATCCCATCCGTCGATCCTGGAGCGAAGGCTGCTTGGCGCTCGTCCTTGCCTCTGCTTCCTCTTCTCCTTCCTCCTCCCCTGTCGTCGGTAAGACCTCTCAACCTGGTGCGGCTTTGAGCGACGACGATGATGACGACACTCCTATTCTTTTCTGTGATCTGAAAAACAATATTGGATCCGTTCTTGTTTCTGAGTCATGTTACTTTCATCTTGCCATCAAATAG

Protein sequence

MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRSWSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILFCDLKNNIGSVLVSESCYFHLAIK
Homology
BLAST of Cla97C02G042960 vs. NCBI nr
Match: XP_038889376.1 (uncharacterized protein LOC120079294 [Benincasa hispida])

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKS+SYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL LVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF
Sbjct: 61  WSEGCLTLVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 105

BLAST of Cla97C02G042960 vs. NCBI nr
Match: XP_016901708.1 (PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 7.0e-49
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNC CALHKSRRQPPHCSHSKSKS+SYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL+L LASASSSPS+SPVVGKTSQPGAALS+DDDDD PILF
Sbjct: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILF 105

BLAST of Cla97C02G042960 vs. NCBI nr
Match: XP_022999015.1 (uncharacterized protein LOC111493529 [Cucurbita maxima])

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-45
Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNCGCALHKSRRQ P CSHSKSKS+ YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPI 104
           WSEGCLAL LASASSSPSSSPVVGKTSQPG ALSDDDDDD P+
Sbjct: 61  WSEGCLALALASASSSPSSSPVVGKTSQPGVALSDDDDDDAPL 103

BLAST of Cla97C02G042960 vs. NCBI nr
Match: XP_023546835.1 (uncharacterized protein LOC111805826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.4 bits (485), Expect = 4.7e-45
Identity = 92/103 (89.32%), Postives = 96/103 (93.20%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNCGCALHKSRRQ P CSHSKSKS+ YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPI 104
           WSEGCLAL LASASSSPSSSPV+GKTSQPG ALSDDDDDD P+
Sbjct: 61  WSEGCLALALASASSSPSSSPVIGKTSQPGVALSDDDDDDAPL 103

BLAST of Cla97C02G042960 vs. NCBI nr
Match: XP_022938303.1 (uncharacterized protein LOC111444438 [Cucurbita moschata])

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44
Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADG+LRPVYEACIAGCDSEIHRRPYHRNCGCALH+SRRQ  HC HSK KSVSYPIRRS
Sbjct: 1   MAADGVLRPVYEACIAGCDSEIHRRPYHRNCGCALHESRRQLSHCYHSKYKSVSYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL L  AS SSSPSSSPVVGK+SQPGAALSDDDDDD P+ F
Sbjct: 61  WSEGCLTLAFASPSSSPSSSPVVGKSSQPGAALSDDDDDDAPVQF 105

BLAST of Cla97C02G042960 vs. ExPASy TrEMBL
Match: A0A1S4E0F4 (uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.4e-49
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCDSEIHRRPYHRNC CALHKSRRQPPHCSHSKSKS+SYPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCTCALHKSRRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL+L LASASSSPS+SPVVGKTSQPGAALS+DDDDD PILF
Sbjct: 61  WSEGCLSLALASASSSPSTSPVVGKTSQPGAALSEDDDDDAPILF 105

BLAST of Cla97C02G042960 vs. ExPASy TrEMBL
Match: A0A0A0LI78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.4e-48
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRP+YEACI GCDSEIHRRPYHRNCGCALHKS RQPPHCSHSKSKS+SYPIRRS
Sbjct: 1   MAADGLLRPIYEACI-GCDSEIHRRPYHRNCGCALHKSSRQPPHCSHSKSKSISYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL+LVLASASSSPSSSPVVGKTSQPGA LS+DDDDD+PILF
Sbjct: 61  WSEGCLSLVLASASSSPSSSPVVGKTSQPGAPLSEDDDDDSPILF 104

BLAST of Cla97C02G042960 vs. ExPASy TrEMBL
Match: A0A6J1KE46 (uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.7e-45
Identity = 93/103 (90.29%), Postives = 96/103 (93.20%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNCGCALHKSRRQ P CSHSKSKS+ YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPI 104
           WSEGCLAL LASASSSPSSSPVVGKTSQPG ALSDDDDDD P+
Sbjct: 61  WSEGCLALALASASSSPSSSPVVGKTSQPGVALSDDDDDDAPL 103

BLAST of Cla97C02G042960 vs. ExPASy TrEMBL
Match: A0A6J1FII0 (uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC111444438 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADG+LRPVYEACIAGCDSEIHRRPYHRNCGCALH+SRRQ  HC HSK KSVSYPIRRS
Sbjct: 1   MAADGVLRPVYEACIAGCDSEIHRRPYHRNCGCALHESRRQLSHCYHSKYKSVSYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDDDTPILF 106
           WSEGCL L  AS SSSPSSSPVVGK+SQPGAALSDDDDDD P+ F
Sbjct: 61  WSEGCLTLAFASPSSSPSSSPVVGKSSQPGAALSDDDDDDAPVQF 105

BLAST of Cla97C02G042960 vs. ExPASy TrEMBL
Match: A0A6J1G546 (uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC111450804 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRRQPPHCSHSKSKSVSYPIRRS 60
           MAADGLLRPVYEACIAGCD+EI RRPYHRNCGCALHKSRRQ P CSHSKSKS+ YPIRRS
Sbjct: 1   MAADGLLRPVYEACIAGCDTEIDRRPYHRNCGCALHKSRRQSPRCSHSKSKSIFYPIRRS 60

Query: 61  WSEGCLALVLASASSSPSSSPVVGKTSQPGAALSDDDDD 100
           WSEGCLAL LASASSSPSSSPV+GKTSQPG ALSDDDDD
Sbjct: 61  WSEGCLALALASASSSPSSSPVIGKTSQPGVALSDDDDD 99

BLAST of Cla97C02G042960 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 7.3e-20
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MAADGLLRPVYEACIAGCDSEIHRRPYHRNCGCALH---------KSRRQPPHC-SHSKS 60
           MAADG+ R ++E CI+G DS I RRPYH+NCGCALH         +++R+PP C  H  S
Sbjct: 1   MAADGIFRSIFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSS 60

Query: 61  KSVSYPIRRSWSEG-CLALVLASASSSPSSSPVVGKTSQPGAALSD 96
           +S+S+PIRRSWSEG  +A+ L S+SSS S+   +  +S      SD
Sbjct: 61  ESISFPIRRSWSEGNIMAMNLFSSSSSSSNLQSLSSSSSLSNLASD 106

BLAST of Cla97C02G042960 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 8.9e-18
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 4   DGLLRPVYEACIAGCDSEIHRRPYHRNCGCALHKSRR---QPPHCSHSKSKSVSYPIRRS 63
           DG+ R ++E CI+ CDS I RRPYH+NCGCALH+  R       C H +S+ V +PI+RS
Sbjct: 7   DGIFRNIFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVVMFPIQRS 66

Query: 64  WSEG-CLALVLASASSSP-----SSSPVVGKTSQPGAALSDDD 98
           WSEG  LAL LAS+SSS      SSS  +   +   + +SD D
Sbjct: 67  WSEGNSLALHLASSSSSSNLQSLSSSSSISTLASLSSTVSDID 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889376.11.5e-5198.10uncharacterized protein LOC120079294 [Benincasa hispida][more]
XP_016901708.17.0e-4993.33PREDICTED: uncharacterized protein LOC103499614 [Cucumis melo][more]
XP_022999015.13.6e-4590.29uncharacterized protein LOC111493529 [Cucurbita maxima][more]
XP_023546835.14.7e-4589.32uncharacterized protein LOC111805826 [Cucurbita pepo subsp. pepo][more]
XP_022938303.15.2e-4486.67uncharacterized protein LOC111444438 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4E0F43.4e-4993.33uncharacterized protein LOC103499614 OS=Cucumis melo OX=3656 GN=LOC103499614 PE=... [more]
A0A0A0LI786.4e-4892.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009330 PE=4 SV=1[more]
A0A6J1KE461.7e-4590.29uncharacterized protein LOC111493529 OS=Cucurbita maxima OX=3661 GN=LOC111493529... [more]
A0A6J1FII02.5e-4486.67uncharacterized protein LOC111444438 OS=Cucurbita moschata OX=3662 GN=LOC1114444... [more]
A0A6J1G5461.3e-4390.91uncharacterized protein LOC111450804 OS=Cucurbita moschata OX=3662 GN=LOC1114508... [more]
Match NameE-valueIdentityDescription
AT2G46490.17.3e-2049.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35110.18.9e-1848.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..98
NoneNo IPR availablePANTHERPTHR35121HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATEDcoord: 2..86
NoneNo IPR availablePANTHERPTHR35121:SF2BNAC04G52100D PROTEINcoord: 2..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G042960.2Cla97C02G042960.2mRNA