Cla97C02G042150 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G042150
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 29999941 .. 30000567 (-)
RNA-Seq ExpressionCla97C02G042150
SyntenyCla97C02G042150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA

mRNA sequence

ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA

Coding sequence (CDS)

ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA

Protein sequence

MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQKESRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV
Homology
BLAST of Cla97C02G042150 vs. NCBI nr
Match: KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 8.4e-60
Identity = 131/214 (61.21%), Postives = 151/214 (70.56%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFFCRPDNK + E   EEK+ TSHI DPK  PA VDA GRR PT VL   RYV 
Sbjct: 1   MADFRYGFFCRPDNKNL-EPQQEEKNTTSHIPDPKYKPAHVDAGGRRLPTVVLPRPRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPS-PAFNYHMELNKLIAEA 120
           TTE Y EE YS+SRD FQ +HTK  EPVK+YGLHHDKG  +PS PA N   E N+L+ + 
Sbjct: 61  TTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRHPSRPALNRPTEFNRLLVKV 120

Query: 121 QKESRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDG-------KE 180
           + E  Q +HEMR+S+PMNDIEKA+E+ KEAVNL   KNNAC   DH KKDG        E
Sbjct: 121 EMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNE 180

Query: 181 AAQRYGKVGPLVSVPGANVATIDCKEAARRYKGA 207
           AA+R+G  G    VP AN ATI+CKEAAR+YK +
Sbjct: 181 AARRFGNFGVPPPVPSANGATINCKEAARKYKAS 213

BLAST of Cla97C02G042150 vs. NCBI nr
Match: KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 125/215 (58.14%), Postives = 145/215 (67.44%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI ES+PEEKS+  HIS+PKS P  +DA GR++PT +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EK+ EEV           HTK YEP+KN     DKG    + A N  +E NKL+A+AQ
Sbjct: 61  PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           +E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYG  G L  V  AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199

BLAST of Cla97C02G042150 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 125/215 (58.14%), Postives = 138/215 (64.19%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI  +  E KSK  HISDPKS P  +DA GR+QP  +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EKY EEV           HTK YEPVKN     DKG      A N  +E NKL+A  Q
Sbjct: 61  PIEKYTEEV-----------HTKKYEPVKN----SDKGTLNSHLAINQRIEFNKLLANVQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           KE+R P++EMR LSEPM DI KA+E LKE VNL  SKNNAC  S  +K       D KEA
Sbjct: 121 KEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYGK G  V V  ANVATIDCKEAAR+Y GA V
Sbjct: 181 ARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV 200

BLAST of Cla97C02G042150 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-49
Identity = 124/215 (57.67%), Postives = 144/215 (66.98%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI ES+PEEKS+  HIS+PKS P  +D  GR++PT +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EK+ EEV           HTK YEP+KN     DKG    + A N  +E NKL+A+AQ
Sbjct: 61  PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           +E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYG  G L  V  AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199

BLAST of Cla97C02G042150 vs. NCBI nr
Match: KAG7969012.1 (hypothetical protein I3843_07G008900 [Carya illinoinensis])

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-05
Identity = 72/256 (28.12%), Postives = 106/256 (41.41%), Query Frame = 0

Query: 3   DFRYGFFCRPDNKKISESHPEEKSKTSHIS--DPKSNPARVDARGRRQPTDVLTGTR--- 62
           D+ Y    R      S ++  E SK S+ S  D    P  +DA GR  P  V T  +   
Sbjct: 5   DYPYRGGSRTSGGVASVANANELSKASYASEADQVCRPVLIDAEGRTMPVIVCTSNQNKQ 64

Query: 63  -YVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLH--------------HDKGNW-- 122
            Y+  T    E V +     +        +P+KNYG                +D  +W  
Sbjct: 65  SYLVDT---IERVRTPLVSGYTHGSPPKADPMKNYGNRDSPPTKADPVKDYVYDDDDWRR 124

Query: 123 YPSPAFNYHMELNKLIAEAQKES-----------RQPRHEMRLSEPMNDIEKAMEYLKEA 182
           + SPA +   E+ + + + Q E+             PR++ +L  P +DI  AME LKEA
Sbjct: 125 HSSPARDRPREVEEFLNKVQTEAMGRPSRSAWAPATPRNDTKLGTPTSDIATAMENLKEA 184

Query: 183 VNLHSSKN------NACPPSDHQKK-------DGKEAAQRYGKVGPLVSVPGAN----VA 209
             + S  N         P S   K+       D +EAA+RYG +  + S P        A
Sbjct: 185 ARVLSVTNVPPQYRYTIPLSTEPKRDTYPDTIDSREAARRYGNLS-ISSRPRTTGDTYTA 244

BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match: A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.2e-50
Identity = 125/215 (58.14%), Postives = 145/215 (67.44%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI ES+PEEKS+  HIS+PKS P  +DA GR++PT +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EK+ EEV           HTK YEP+KN     DKG    + A N  +E NKL+A+AQ
Sbjct: 61  PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           +E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYG  G L  V  AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199

BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match: A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.2e-50
Identity = 125/215 (58.14%), Postives = 138/215 (64.19%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI  +  E KSK  HISDPKS P  +DA GR+QP  +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EKY EEV           HTK YEPVKN     DKG      A N  +E NKL+A  Q
Sbjct: 61  PIEKYTEEV-----------HTKKYEPVKN----SDKGTLNSHLAINQRIEFNKLLANVQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           KE+R P++EMR LSEPM DI KA+E LKE VNL  SKNNAC  S  +K       D KEA
Sbjct: 121 KEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYGK G  V V  ANVATIDCKEAAR+Y GA V
Sbjct: 181 ARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV 200

BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match: E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 124/215 (57.67%), Postives = 144/215 (66.98%), Query Frame = 0

Query: 1   MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
           MADFRYGFF RPDNKKI ES+PEEKS+  HIS+PKS P  +D  GR++PT +L  TRYV 
Sbjct: 1   MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60

Query: 61  TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
             EK+ EEV           HTK YEP+KN     DKG    + A N  +E NKL+A+AQ
Sbjct: 61  PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120

Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
           +E R P++EMR LSEPMNDI KA+E LKEAVNL  SKNNAC  S H K       D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180

Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
           A+RYG  G L  V  AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199

BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match: A0A2P5XVS4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G191100v1 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.3e-05
Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0

Query: 128 HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVP 187
           HE  LS+P N+I  A+EYLKEAV   +S+ N  P       D +EA ++YG +    S  
Sbjct: 268 HEANLSQPTNNINTAVEYLKEAVKPPASRFNGYP----NTIDSREAERKYGGLAVGTSPI 327

Query: 188 GANVATIDCKEAARRYKGATV 209
           G+   TID +EAAR+Y G  V
Sbjct: 328 GSYGRTIDSREAARKYGGTAV 344

BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match: A0A6P4MX67 (uncharacterized protein LOC108463167 OS=Gossypium arboreum OX=29729 GN=LOC108463167 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.3e-05
Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0

Query: 128 HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVP 187
           HE  LS+P N+I  A+EYLKEAV   +S+ N  P       D +EA ++YG +    S  
Sbjct: 268 HEANLSQPTNNINTAVEYLKEAVKPPASRFNGYP----NTIDSREAERKYGGLAVGTSPI 327

Query: 188 GANVATIDCKEAARRYKGATV 209
           G+   TID +EAAR+Y G  V
Sbjct: 328 GSYGRTIDSREAARKYGGTAV 344

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6599284.18.4e-6061.21putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAA0063635.14.6e-5058.14hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK183... [more]
KGN60838.14.6e-5058.14hypothetical protein Csa_019431 [Cucumis sativus][more]
ADN33904.11.3e-4957.67hypothetical protein [Cucumis melo subsp. melo][more]
KAG7969012.15.9e-0528.13hypothetical protein I3843_07G008900 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VCJ62.2e-5058.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LG872.2e-5058.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1[more]
E5GBR26.5e-5057.67Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A2P5XVS48.3e-0543.21Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G191100v1 PE... [more]
A0A6P4MX678.3e-0543.21uncharacterized protein LOC108463167 OS=Gossypium arboreum OX=29729 GN=LOC108463... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G042150.1Cla97C02G042150.1mRNA