Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA
mRNA sequence
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA
Coding sequence (CDS)
ATGGCTGATTTTCGATATGGTTTCTTTTGTCGCCCAGACAACAAGAAGATATCAGAATCACACCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATCCCAAATCCAACCCAGCTCGTGTCGATGCCAGAGGAAGGCGACAACCTACTGACGTGCTGACCGGAACAAGGTATGTTCCAACAACCGAGAAATATGCTGAAGAAGTTTACTCAAGTTCAAGGGATAACTTCCAACAAAACCATACTAAGACGTATGAACCAGTGAAGAATTATGGACTTCATCATGATAAAGGGAATTGGTATCCAAGCCCTGCTTTTAATTACCATATGGAATTGAATAAACTCATAGCCGAAGCCCAAAAGGAATCAAGGCAGCCAAGACATGAAATGAGATTAAGTGAACCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTAAATCTTCATTCTAGCAAAAATAATGCTTGTCCTCCATCAGATCATCAGAAGAAAGATGGCAAAGAAGCAGCACAGCGGTACGGGAAGGTCGGGCCACTGGTCTCGGTGCCGGGTGCCAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAGGTATAAAGGTGCAACAGTGTGA
Protein sequence
MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQKESRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV
Homology
BLAST of Cla97C02G042150 vs. NCBI nr
Match:
KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 241.1 bits (614), Expect = 8.4e-60
Identity = 131/214 (61.21%), Postives = 151/214 (70.56%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFFCRPDNK + E EEK+ TSHI DPK PA VDA GRR PT VL RYV
Sbjct: 1 MADFRYGFFCRPDNKNL-EPQQEEKNTTSHIPDPKYKPAHVDAGGRRLPTVVLPRPRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPS-PAFNYHMELNKLIAEA 120
TTE Y EE YS+SRD FQ +HTK EPVK+YGLHHDKG +PS PA N E N+L+ +
Sbjct: 61 TTETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRHPSRPALNRPTEFNRLLVKV 120
Query: 121 QKESRQPRHEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDG-------KE 180
+ E Q +HEMR+S+PMNDIEKA+E+ KEAVNL KNNAC DH KKDG E
Sbjct: 121 EMEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNE 180
Query: 181 AAQRYGKVGPLVSVPGANVATIDCKEAARRYKGA 207
AA+R+G G VP AN ATI+CKEAAR+YK +
Sbjct: 181 AARRFGNFGVPPPVPSANGATINCKEAARKYKAS 213
BLAST of Cla97C02G042150 vs. NCBI nr
Match:
KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa])
HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 125/215 (58.14%), Postives = 145/215 (67.44%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI ES+PEEKS+ HIS+PKS P +DA GR++PT +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EK+ EEV HTK YEP+KN DKG + A N +E NKL+A+AQ
Sbjct: 61 PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
+E R P++EMR LSEPMNDI KA+E LKEAVNL SKNNAC S H K D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYG G L V AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199
BLAST of Cla97C02G042150 vs. NCBI nr
Match:
KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus])
HSP 1 Score: 208.8 bits (530), Expect = 4.6e-50
Identity = 125/215 (58.14%), Postives = 138/215 (64.19%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI + E KSK HISDPKS P +DA GR+QP +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EKY EEV HTK YEPVKN DKG A N +E NKL+A Q
Sbjct: 61 PIEKYTEEV-----------HTKKYEPVKN----SDKGTLNSHLAINQRIEFNKLLANVQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
KE+R P++EMR LSEPM DI KA+E LKE VNL SKNNAC S +K D KEA
Sbjct: 121 KEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYGK G V V ANVATIDCKEAAR+Y GA V
Sbjct: 181 ARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV 200
BLAST of Cla97C02G042150 vs. NCBI nr
Match:
ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 207.2 bits (526), Expect = 1.3e-49
Identity = 124/215 (57.67%), Postives = 144/215 (66.98%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI ES+PEEKS+ HIS+PKS P +D GR++PT +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EK+ EEV HTK YEP+KN DKG + A N +E NKL+A+AQ
Sbjct: 61 PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
+E R P++EMR LSEPMNDI KA+E LKEAVNL SKNNAC S H K D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYG G L V AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199
BLAST of Cla97C02G042150 vs. NCBI nr
Match:
KAG7969012.1 (hypothetical protein I3843_07G008900 [Carya illinoinensis])
HSP 1 Score: 58.9 bits (141), Expect = 5.9e-05
Identity = 72/256 (28.12%), Postives = 106/256 (41.41%), Query Frame = 0
Query: 3 DFRYGFFCRPDNKKISESHPEEKSKTSHIS--DPKSNPARVDARGRRQPTDVLTGTR--- 62
D+ Y R S ++ E SK S+ S D P +DA GR P V T +
Sbjct: 5 DYPYRGGSRTSGGVASVANANELSKASYASEADQVCRPVLIDAEGRTMPVIVCTSNQNKQ 64
Query: 63 -YVPTTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLH--------------HDKGNW-- 122
Y+ T E V + + +P+KNYG +D +W
Sbjct: 65 SYLVDT---IERVRTPLVSGYTHGSPPKADPMKNYGNRDSPPTKADPVKDYVYDDDDWRR 124
Query: 123 YPSPAFNYHMELNKLIAEAQKES-----------RQPRHEMRLSEPMNDIEKAMEYLKEA 182
+ SPA + E+ + + + Q E+ PR++ +L P +DI AME LKEA
Sbjct: 125 HSSPARDRPREVEEFLNKVQTEAMGRPSRSAWAPATPRNDTKLGTPTSDIATAMENLKEA 184
Query: 183 VNLHSSKN------NACPPSDHQKK-------DGKEAAQRYGKVGPLVSVPGAN----VA 209
+ S N P S K+ D +EAA+RYG + + S P A
Sbjct: 185 ARVLSVTNVPPQYRYTIPLSTEPKRDTYPDTIDSREAARRYGNLS-ISSRPRTTGDTYTA 244
BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match:
A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1)
HSP 1 Score: 208.8 bits (530), Expect = 2.2e-50
Identity = 125/215 (58.14%), Postives = 145/215 (67.44%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI ES+PEEKS+ HIS+PKS P +DA GR++PT +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EK+ EEV HTK YEP+KN DKG + A N +E NKL+A+AQ
Sbjct: 61 PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
+E R P++EMR LSEPMNDI KA+E LKEAVNL SKNNAC S H K D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYG G L V AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199
BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match:
A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1)
HSP 1 Score: 208.8 bits (530), Expect = 2.2e-50
Identity = 125/215 (58.14%), Postives = 138/215 (64.19%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI + E KSK HISDPKS P +DA GR+QP +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EKY EEV HTK YEPVKN DKG A N +E NKL+A Q
Sbjct: 61 PIEKYTEEV-----------HTKKYEPVKN----SDKGTLNSHLAINQRIEFNKLLANVQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
KE+R P++EMR LSEPM DI KA+E LKE VNL SKNNAC S +K D KEA
Sbjct: 121 KEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYGK G V V ANVATIDCKEAAR+Y GA V
Sbjct: 181 ARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV 200
BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match:
E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 6.5e-50
Identity = 124/215 (57.67%), Postives = 144/215 (66.98%), Query Frame = 0
Query: 1 MADFRYGFFCRPDNKKISESHPEEKSKTSHISDPKSNPARVDARGRRQPTDVLTGTRYVP 60
MADFRYGFF RPDNKKI ES+PEEKS+ HIS+PKS P +D GR++PT +L TRYV
Sbjct: 1 MADFRYGFFVRPDNKKI-ESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVT 60
Query: 61 TTEKYAEEVYSSSRDNFQQNHTKTYEPVKNYGLHHDKGNWYPSPAFNYHMELNKLIAEAQ 120
EK+ EEV HTK YEP+KN DKG + A N +E NKL+A+AQ
Sbjct: 61 PIEKHTEEV-----------HTKKYEPMKN----SDKGTLDSNLAINQRIEFNKLLAKAQ 120
Query: 121 KESRQPRHEMR-LSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKK------DGKEA 180
+E R P++EMR LSEPMNDI KA+E LKEAVNL SKNNAC S H K D KEA
Sbjct: 121 EEVRLPKYEMRLLSEPMNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEA 180
Query: 181 AQRYGKVGPLVSVPGANVATIDCKEAARRYKGATV 209
A+RYG G L V AN ATI+CKEAAR+Y GA V
Sbjct: 181 ARRYGTFGALGRVSSANEATINCKEAARKYNGAEV 199
BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match:
A0A2P5XVS4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G191100v1 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 8.3e-05
Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 128 HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVP 187
HE LS+P N+I A+EYLKEAV +S+ N P D +EA ++YG + S
Sbjct: 268 HEANLSQPTNNINTAVEYLKEAVKPPASRFNGYP----NTIDSREAERKYGGLAVGTSPI 327
Query: 188 GANVATIDCKEAARRYKGATV 209
G+ TID +EAAR+Y G V
Sbjct: 328 GSYGRTIDSREAARKYGGTAV 344
BLAST of Cla97C02G042150 vs. ExPASy TrEMBL
Match:
A0A6P4MX67 (uncharacterized protein LOC108463167 OS=Gossypium arboreum OX=29729 GN=LOC108463167 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 8.3e-05
Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 0
Query: 128 HEMRLSEPMNDIEKAMEYLKEAVNLHSSKNNACPPSDHQKKDGKEAAQRYGKVGPLVSVP 187
HE LS+P N+I A+EYLKEAV +S+ N P D +EA ++YG + S
Sbjct: 268 HEANLSQPTNNINTAVEYLKEAVKPPASRFNGYP----NTIDSREAERKYGGLAVGTSPI 327
Query: 188 GANVATIDCKEAARRYKGATV 209
G+ TID +EAAR+Y G V
Sbjct: 328 GSYGRTIDSREAARKYGGTAV 344
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6599284.1 | 8.4e-60 | 61.21 | putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAA0063635.1 | 4.6e-50 | 58.14 | hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK183... | [more] |
KGN60838.1 | 4.6e-50 | 58.14 | hypothetical protein Csa_019431 [Cucumis sativus] | [more] |
ADN33904.1 | 1.3e-49 | 57.67 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
KAG7969012.1 | 5.9e-05 | 28.13 | hypothetical protein I3843_07G008900 [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VCJ6 | 2.2e-50 | 58.14 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LG87 | 2.2e-50 | 58.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1 | [more] |
E5GBR2 | 6.5e-50 | 57.67 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A2P5XVS4 | 8.3e-05 | 43.21 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A13G191100v1 PE... | [more] |
A0A6P4MX67 | 8.3e-05 | 43.21 | uncharacterized protein LOC108463167 OS=Gossypium arboreum OX=29729 GN=LOC108463... | [more] |
Match Name | E-value | Identity | Description | |