Cla97C02G036960 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C02G036960
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	50S ribosomal protein L2, chloroplastic
Location	Cla97Chr02: 22813642 .. 22829877 (-)
RNA-Seq Expression	Cla97C02G036960
Synteny	Cla97C02G036960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCATTAGGATTGCGATCAATAGCCTCCAAACATATGTGGACGAATGAAGAGGATAGAATTCTGGTTAAGTGTATGGTACAATGTATGAATTCTGGTTGAGGATAGAATTTCGACTTGGTTTTTTAGCGAATGTGCTAAGGATGATGCAACAAAAAATTCCAGGGTGTTCCATATAGGTAAGCCCCAATTTAGAGTCCAGGGTGAGGACGTTGAAGAGACAATGCAACCCGATCGTTGAAATGTTGGGCCTAGGATATAGTGGGTTCGGTTGGAAAGCGAAGCGGAAGTGTATTGACTGTGAGCCTGAGATATTCGATGCGTGGGTCAGGGTAATGAACAAATTTAGTATTTGTTTTATATTCTTTTTAAATATATTTTAGCCAAAACATAACACATTTCATTTGATGCAAAGTTATCCAAGTGCCAAAGGTCTCAGGCATAAGTCATTTCCATTCTTTGATGACCTGGCAATTGTATTTGGCAAAGATAGAGCAATAGGGAATCGTGCCACTACCACTGCTGAGGTCGGATCTGAACCTATAATGGACGATGAGAATGACGACATTTTAAATAACCAATCCCCAGACTTTGATAATTTCTACATTCCTGATCCACCGTTCATTAGAGCACCTACACCATAAGACCTTCTATCTACCCCCGGTGGTAGAGGGGCTGGGAATAGCATGCCAACAAGAAATAGGAGGTCTAGAAGTTCGTCAATTGGAATACCATGAAGTGGTACAATAAGGCTTTCAACTTTTAACGAAGTCTATTGACGGGATTGCACAATGACCTATTGTGAATGATGACCTGGCAAGTTATCATCGTAGAGAATTGTACGTTGAGCTACAATCAATCCCTAGACTGTCAATGCAAGATAGCTTAACTATTGCATGGTCATTGCTTGCAGATCCATTATTGTTAAGTCACTTCGTGGACTTCCCACCGCAATGGAAGTATGATTATTGCATGCAAGTCCTTGGGTGATCGCAGAATGAAACACCATGACTCTGCTTCTTTGAAACCTGATTTTTGTTGATGGCTTCTTCCTTCAATTTGAAGGAAAATTATCTTCTTTGTATGAACCTTATCTTTCTCTCCATACGTTTGTATGGATTGTTTGATTTTTTATGTCTGTACTTGAATCGTTTATGTATTTTGAATTTCATATGTTAGACTTTTTGTTTTTCCAAAGTTGTTTGAATCTCAATTCTAAAGTTGATGAAAGTAGAATTTTATATAGTATCACGAGCTTATATAATATATGATGTAGAAAACAGATATAGAAAAAAAAACAGTCAAACTCATCCCAAATCAAACACTGTAATTAGAAACATTAGAAACACAGCCAACCCAACCCTGCACTCCAAACATTGTAATCAGATTCCCAGTGATCTTGATTCTAGGCAAAAAAAAAAAACCCACCATAATTAAATTCCAATAATCCTGATTACAATTCAGCTCCCTAAGCACCCCCTTGAATTCTTCCTCTCTCTCGTCTCCCACCCATTTCTCATTTCCCATTGCAATTTCAAATCACAAATTTCTCTCTCCTCTCCCAATACCTTTTTAGAAAATGTGGCATGTTGAACTCTCCTCTCCCAAATTTCTCTCTCCTCTCCCAAGCACCCCCTTGAACTATTTGATGCCAAGGATGAAACAATTGTTTCCAAATATCAATTGGCACAAGGGCAAAGGAATGAACTTTCATTTTGCAAAGCCTGAGTTAAAGACAAAAGCTGGAATTATTGGTGGTTCTACAATTACAGGTATGTGGAAAAGACCATCAAACCTCAAAAGTAGACCAATGGGGAATAACACAAGCCTTGATGACATCCTTCTCTACACGGACTCATATCAAAGCCTATACTGTCAGCTTCTTTGTGGGATCTACCAAAACGACATAGTTTTTTGAGTTGGTGCTCTTTTTGCCTCTACATTGATTCATGTTCTTAAAACCTCTTTCCACGTGTCGGACTAAGAACAGTCAACAAGTGAAACCACGTGTCAGACTAAGAATAGTCAACAAGTGAAAGCACATGTCAGACTAAGAATAGTCAACAAGTGAAAGCACATGTCAGACTAAGAACAATCGTCAGATTCCCCTCCTAAACGTACCTGCACGTTCTCTAGACTGGGAGCTGCCACGTGTTGGGCTGGGAGGAAGTGGTGCAGCTGACCGTTGATCTTCATCACTATAAATACAGCCTTCGCTCCGCACTTCCCATTCACTTTTGCTTCACATCCTCATCTCCCCATATTCTTGTCTCCTAATTTTCCTCCACAAAATTCTTTCCAAACCAATTTTATTTTATTCATGTTTTTGGAGCAAATTTTAGAAGGGTGTCAGTATTATCAACTGATCAAGGTGCAAGTTCAGTTGACCATTAGAGGCTGTTTTATCCTGGGGACGACGTGGTGTAGTAAAGAACTGCTTGCACTCTGGTAGAGCCACGAAACGTCTTAAAGAGAGTGAGCTTCGCAACTCAGCCTATCACCAGTTTCTGTTTTGCAGGGTCTTTTCGGGTCGTTTGTTACCAACGGTTGCAGTTTGTGCTATTCTCTGCTGTCAATCAAAGTAGGTATTCCAACAATTTTAAGACGTTGAATCGCTGCTGTGATGGCACTATCAACCCGAACCGACATCATGACCTCTGATCTCAACCGTTCTTTTTGTTTCGAAAGGGCGAATTTCAAACGCTGGAAACAAAAGATGTTGTTTTTCTTGACAGTCAAGAAAGTAGCCGACCCCTGTACTACGAATCCGCCTGAGGTCCCAAAAACCAATCCGATTGAAGATCAATTGAAGACTGCTGCCAAGTGGGAGGAAAAAGATTTTCTATGCAAGAATTTTATTTTAAACAATTTGACTGATGATCTTTGTGATTATTATAGCGTGATGATCTTTGGGATGCCCTATAGAAAAAATACGACACCGAGAAAGTTGGTTCAAAGAAGTATGTTGTAAGCCGCTACCTGAAATTCCAAATGACTTATGACAAGTCGATGGAAGTTCAGTCACATGAATTGCAGAAAATTGCCCACGAAATAATAAGTGAAGGTATGCCTTTTGACGAATAGTTTCAAATTGTTGTTATTATTTACAAGCTATCTCCATTGTGGAAAGACTTTAAAACACTCTGAGGCACAAGACCAAAGAATTCTCCTTGGAAAGTCTGATCACACGGCTGAGGATAGAGGAGGAGACTCGAAAGCAGGACTAGAGAGAAGAGATATATCTCATGATAAGGAAGCCAACTCCAGCAACTGTAAAGTCTGACCAGAAATCGAAAAAGATCAAGAGAAAAGGTCAAAACCGCGAATCCAACAACCAACAGAATCAAAAGAAACAGAAACCCCCCTGGAGAAATGGTACAGTTCCTTTGCTTTAATTGTAATAAACTTGGACATATGGTTAGGAACTATAGAAACAAGTGTCATCCTGCTGGGCAGGTGAACTTGACTGAAGAACACTTAATGGCCATGATCACAAAACTAAATGTGATCGGTGGTTCTAAGGGGTGGTGGATAGACATTGGCACTATGCGCCATATTTGTCATGACCGTAGTTTATTCAAAACGTATAATGAAACTAAAGATAAGAATATTCTGTTGAGAGATCATCACTCAACGAAAGTTGCTGGAATTGGCAAGGTGGAGCTGAAATTTACCCCTGGGAAGACTCTCACTCTTAGGGAGGTCTTGCACACTCCGGAGATAAGGAAGAATTTTGGTCTCAAGATACCCCCTCAACAAAGCCGGCTTCACTCAAACAATAGGAGCAGACCAATTTACCCTTACTAAAAAATAATGTATTCATTGGAAAAGGATATGCTACAGAAGGCATGTTCAAATTGAACCTAGTTGCTAATAAAACGAATTCTTCTGTGCATATGTTGTGTTCTATTAATACTTGGCATGCTAGACATTGTCACGTTAACAAACGATTAATTAGTAACATGAGTAGGCTGGAAATGATTCCTAAGTTATCCCTATAAATGCGAATACTATAGTCAGGCTAAAATCACTAGAACTTCGCATAAATCTGTTCTTAGGGAAAATGAGCCTCTAGACTTGATTCATTCTGATCTTTGTGAACTTGACGACATCTTGACTAGAAATAGTAAAAGATACTTCATCACCTTTATTGATGATTACTCCAATTTTACTTTTATATACTTGTTGAAAAATAAAAGTGATGCTTTTGATGCCTTCAAACAATTCGTGATTGAACTAGAAAGTCAGCATAATAAAAAGATAAAAAAAAACTTCGTAGTGATAGAGGAATCGAGTACAACTCGGACAATTTTAACGATTTTTATAAATCACATGAAATAATACATGAAAAGACTACAACTTACTCTTCTGAAATGAACAATAAAGTCGAAAGGAAAAATAGAACTCTAGCCAAGCTAGTAGTTGCTGTTCTTCTAAGTTCAAGAGTTGCGTCTTATTGGTGGGGTGAAATAATCCTTACCATCTGCTATGTTGTAAATAGAAAACCTAAGTCTAAAAGCTCAACTTCACCCTACGAAGCTCTTAAGAATAAAAGACCTAACTTATCCTACTTTAGAACTTGGGGTTGTTTAGCCTTTGTAAGGATTCTTGATCCCGAAAGAAGAAAACTTGCCAGTAGAGCCTTTGAGTGCATATTTATAGGGTACTTAGTTAATAGTAAAGCCTATAGGTTCTATGATCTAGCTAATAGGGTGGTCATCGAGTCAAATGACGCCGACTTCTTTGAGGATAGATTTCCCTTTAAATCTGGAAATAATGGGGGCATAAGCACCAGTAGTCACCCTCTAACTAGAAATGCTATCTCCTCTGAAGATCTTAGCCCAGAACCTGGAAGGAGTAGAAGGTCTAGAACTGTCAAAAGCTTTGGAGATGATTTCCAAACCTTTAACATAGAAGAAAACCCAAAAGACCTAAAAGAAGCCATGTCTTCTATAGATGCCAACTTATGGCAAGAAGCGATAAATGACGAGATGGATTCTCTAGAGTCAAATAGGACTTGACACCTAGTAGACCTCCCTCCAAGATGTAAGGCCATAAGCTGTAAGTGGATATTAAGAAAAAAAACTTAAGCTTGATGGATCTGTAGACAAGTTTAAAGCCAGGTTGGTGGCCACTGGCTTTAGACAAAGAGAGAACATAAACTTCTTCAATACCTTCTCCCCGGTCTCAAGAATTACGTTTATCCGTGTTTCATTCTCTCTTGCTTCTTTAAACAACCTCATAGTACATCAAATGGACATTAAGATTGCTTTCCTTAACGGTGATCTCGAAGAAGAGATTTACATGGAACAACCAGAAGGTTTTGTGATCCATGGTCAGGAGAACAAAGTCTGTAAGCTAGAAAAATCTCTCTATGGCCTAAAGCAAGCTCCTAAGCAATGGCATGAGAACTCTAATATCCTAATCCTCTCAAAAGGTTTCAAGGTTAATGAAAGTGATAAATGCATCTACTATAAGGGTCGTTTCCTATAGCATTCACTACAGTGGGATACACATGCAGGCCTTAAAGCATGGGCTTATGAACTACACTCTAGTGTTAACCGCAAGTGTACGGGTCAAATTATAATATAAGACGGTAAAGTCCGAATATCATTCCACTGAGGATCCAATTGTGAAGGTTAAAGTTACTTAGCTATTCTAGAGTTGAATCAATTTTATTTGAGGATTGGAATTTAATTTGTGAATTATGGAAAATACAAACTAAATAAGAGAGTTCCAGGGTAATGAATCCTTGTTTATTTCATCATGCAATATTATAGATTTCATCGATTTTATTGCAATTCATATGCCTAAGTCTAGAAACTTAATTCCAAGTTATTTTCTCTAAAAAACAACCCTTTCTCATGTAACTTGATTGATTATTAATCTCTTAAAACCAATACAAAATTACATGGCATTAAAAATAGTCTTTATCAACTTTTATTGTCAACCTAACTACTCTCGTGATAGATTAACAACAATTCATTGTTATGGATCATGTTAAAAATACAATCTCTCAATCATACATCGAACCTAACATGTGAAGCTAGTCGATCCACAAGAATTAAACACAATAACAATGAAAAGCATAATCATTCCAACAAAACTATGAAAGTCTACAATATCAACATGAATTCATAAACAATTCATCAAAACCTTAAAACGAAAGAGTTTAGCCACTCATATCTTGAAGTAACATGTTCAAACAATATAAACAAAGAAAGAGTGTAAAGAAAAGAAAACTCTACTAAAAAGAGGCTCTTGATTGAGGTAGCACCATCACAATCTCCTTGGCTCTCACGTCGGAACTCGAACGACACCACAACTCTCTTGAACTTTTTTCCTCTTCCTTGCAACTAACTCACTCTTTGAACTCTTTTATGAACTCTCACTCAATTCTCTCCTGCTTGTGACTCTTTTGGTCTGTAATTTCGTGCTTTGGTTCATTTTTAGGGCTACTGGAAACCCCTAAATTTTATAGAGTATTCCGCACAAGAAAAATTTCCAAAAGTACATTTTTTTTTTCATTTATGGAAATTGGCGCCGCAGAGCTACCAAATATAGAAAGAGAGCGTCGCGGCACTGCGGCTAGGATGCGTAGACCTGCTTTCGGGTTTTAGCGCCGCGGCGCTGCCCCAATTTTGGCAACTTTGTTATTTTCTTCTCTTTTTCATCGTATTCTTGCTCGGTTTTGATCTTTTGGTCTTTTCTTCTAATTTTCCTCATTTTAACCTGAAAACCACTAGCAAACAAGTGAAATCTAATATAAACTCCCTTAATTTAAGAGAATAGAAAGCACTTTTCAAGCGCTTATCACCTAGTAATGTCAAGCATGAAATGCTGTCAGAGATAGAGTTCAAAACAGAAAGGTTACTCTAGTTTGTTCTGAATCATCTTCACTACATAAAGGTTCAAGTCGCAAGACATCTTTGCTTATGTTGAGCGTTACATATTTTTTTGCTCAATGAATTACTTCTTTCCTGTGTTAAAAAAAAATTTCAAGTGCAGAATTGTTGGTGAAAATTTTGTTTTAAATTAAAAGAAGTTTTCTTTTTCTTGAATCCCACATCGGTTATTTCGAATGTGGGACTACTATTTATTAACTCTCTCTTACCCCTTTAGCTTTAGGCCCAAGGGGGAACCCAGATTCCAAAAAGGGTCAGGAGATAGACCTAGTTGAGCCTATCAGGATCTCCACATGCGCGTGAGCGTGAGATCACCATAAAATTCTTTCCAAACCAATTTTATTTTATTCACGTTTTCCAAGAAAATTTTAGAAAGGTGTCAGTATTATCAACTGATCGAGGTGTAAGTTCAGTTGACCATTAGAGGCTGTTTTATCCTGGATGATGTGGTGGTTTCTGTTGCAGCGTCTGTTCGGGTCGTTGGTTACCAACAATTGCAGTTCATGCTGTTCGCTACTGTCAATCAAAGTAGTTGTTCCAATAGTATATGAAGATTGTTGCCTTGAACGATCTCATGAAAAAAGTATCAATTCCTTTGGAGATTAAGATTGTTAAGGCTAGAACTTTTGAGAATAGTAAAAATAATGTCAATGTGTGATTAATGATTTTCATTGAGACTTAATTAAAAATCCCACTTCTGATAATTTTTTTAAGAGCAATCATCCCCCATCCGTGCAGTCCACTTTTGTTACATATATAGTAAATAAAAATAAAAATAGTTCAATTCTTTCTTAAAAAAAAAAAAAAAAAAATCTTTGTCATGGGATAAATTTTAGGGCAAAATATACTTTTGGTCCCTAAGTTTTGGTCTAATATCTATTTGGTCCCTATAGTTTAAAATAGACAGTTTTAGTCTCAAAGATTTGAAAAATGCATTTAATTCGTCATTAGATTGGTTTGACTATTAGTTGACTAACAAAATGATGATGTGGGGTTGATGAGGTGACATTTTTTAAACGATGTAGCATTTTTTTTTTTTTGTTGATGTGGCACTTTTTTGTTTTTTATTTTTTTTTATGTTTCTATTCTCCTTCCACGTTCTCCTCTCCATTTTTTTTTATCCAATGACAACCACAAGCACTGCTTCAGTGATGGAGCAACAATAACCTGCGAAATCGCTACCCTACTTGAATCGTCCATGACCCAACCTGTGGCCTTGTTCAAAAATCATGCACTACAATTTCTTGCTCTGCCTCACTAACCCCTCCCATGAAAATTAGAAGCGTTGTAGATGGGTGGATCTAGAGCAATATTGCCGAAAGTGCAATCCAATTATTTGTTTGAATTTTTGTGGTTGAGCAAGAAACTTTTAAAAGATTAGATATGTGTCTAATAAAAATTTGTTATGGTTCCAAAATATATGGAATTGACTTCTAGTTATTTGCAGAGGTGTACCCATTCACAATAATTAAGAAGAGTTCACTAGTTAATTAAAGCCACCCACTCATCTCCATCTCCAATTAGATTTAATTGTGTATCTTTCTATTTTGTGTGTAAATTAAAAATTCATGACAAATGTAGCAGAGAAGTATTCCCATGGTCTAGAAAGAGAAAAATGGGAGATGGGCTCATGCTAGGGGGATAAAGTTGCTCTATAGTCCATCGCGGCCAAAGCAGTGTTTGTGGCTACCATTGGCCACTAGTAATTTGGCCCAACCGAAACTTTGGAAAAACTCTGAAAGAAGAAAATGGAGAGGAGAAACGAGGAGGAAAAGATAGAAGGCGAGAGTAGAGAACGAGAAAAGACAAATAAAATTAAACAAAAAAAATGCCACATCAATAAAAAAAAATATCATATTATTTTTTAAAAAAATGTTCACGTCATCAACACCACATCATCATTCTGTTAGTTAACTAACAGTTAAACTAGTCTAGGGACCAATTAAATGTATTTTTCAAACCCAAGGACTAAAAATGTCCATTTTTAAACTTTAGGGACCAAGTACACATTTAGGCCAAACCTCAGGGCTAAAAGTGTCTTTTGTCTTAAATTTTAATTGGACATCTGTCTAGATGACATAAAGACATATACAACTTAGGCAACACTTAAGTATTTTTTTTAATATTGCATCATGGATGTATATGAGTCTAACATCCTATGTCTTAACTATTATACACATGAGCAAACATCAATTTATACCCCTGAACTTTGGGGAATGTATCAATTTAGCCATAAACTAATAATTGTATCAATTTAAACTCTAAATGTTATAAGTATATCTAGATAAAACATAATGGAGAGTTTAAGTTGATACACTTATGAAAGTTCAGGGTTTAATATACTTATAAAAGTTCATAGTTTAAATTGATATTGTTGAAAATGTAGTTTATAGCCATTGGGTTGAATACAACAATTAACTGTCGCAACCTCTCATCTAAGTGTGCATAAATAGAAGGCCCATTTTAATATTTTAGAGGACTTACAAGTTTTCTTTAAGAGCACCCTTCTATGTGTAGTTCACTCTTGTAATTTCCTTTGTTCCTTAATTGAATCTAAAGCTCTCATTTGCCATAGTGGACATAGGCCTTATGTCACACCCCCTCCCGAATTATCCTCTAAAACCCGAGAGGAGGTGTGAAAACAGCAATCTTGACTCCTCTGTAAGGTTCACTGTCCAACCACTAACACTAAAGACGACCCAGACGAGGTTCTTTCGTAGACAAAGCATCCCGAACTCGCTCGCTACCTGGAAAATAGAAAAACATGGGAAAGCGTGAGTTAAAGCCCCGTGAGTGACTAGTTTTATAAAACTAACTTTTATTCGAAACAGGCATGTTAAATCTGTTACGCATAAAACAGGGATTCAAATCATCATTTCTGAAAAATCATACTTTCCAACCACTTCATCAAATCACATGAATTCACATTTAAAACATCTTTTCCAATCATATTCAATAAAACAGTCTACAACTCACCAAGTCTTCTTTTGTTTTAAAAATTTTCCTTAGTCAGGGCGGAGCAAGACTCAACACACCCAACGTCGAAAACAACCTTAGTTGAGGTGGAGCAAGACTCAACACGCTCAACGTCGAATACAACCTTAGTTGAGGCAGAGCAAAACTCAACGCACTCAACGTCGAAACAACCTTAGTTGGGGTGGAGCAAGACTCAACACACCCAACGTCACAACCTCTATGTGCACATAGGAATATGGCGGGTTGCCCAAGTACCTTCTTCATGTCCCTCAGTACTGGGTCCTGGGGAAACCCACATGCCTTTAAGCATTGAGCCTCCTCTAAAACACTTTAGAAACAAATTTTACCATAATAAGTTCATAGAGAAAACTTTCATAAATAATATCTCACAAACATATATTTCAAGTGTTTCAACCTTTTAATGAAAACAGATAACATGCCTCATAAATAACATAAACAATCATCATGCTTTTCGAGTAAACACTTTATCATCAAACCACATCTTATAAGAAAACCAGAATAACATTTCTATTAAACCATTTTCAAAGAAAGGAAAGTGTCACTCACAAAACGCTTAAGGAATTTCCTCTTTTTCCTTCAAATTCTGCTTTCTCGAGCTCCTTGAACGCAAGGCTTGAGGCTTTAAACCGCAAGGTACCTGTTTCCCCTCTCTGGCAACTCAGTTGGACCCAACCTTGCTCCTTGAACGCAAGGTTTACAGCTGACGCAGAGTGAACAACTCTTCAGGCTTTCCTTTTAAATGCATCGACCTCTCTTGGACGCAAGGTCCAACTTGAACGCAGCGTTCACCTTGAACGCAGGGAGATAGCTTCTCCTGCTTCGTCTTCAAAGCTCCGACTGTTTGGAACCTTCCTCTTGCTCCTCTTCCCTAAGAGTCCTATTTATAGCTTTGGAATAAAGTGCTTTCCATCTCACTTCTCTTCTCTTTTTGCCACTTATTTGCCACCTATCACGCTGCATGACTTATCCAACATGCAATCTTGACACCTCCTCCTTATGAGGTGTTTAGTCTAGATGAACCCATGCAACCTTTACCAACTCATCTAAACTCATGCAACCTTTACCAGCTCATCTTATGCGTCTAACTTACTCCAATATACAACTATTCATCCAACATAGTGTTCTCTATGTGTTCATATAATCCTCTTCCAGGTTTTAGCTTCTTTACTCCCTTCCCTTACTCTCAGCCATACTACCTTTGACCCCGTTTCTCCACCGCATACTACAAGGTATCCATATCTCAAACGCATACTACTATTTGTTTGTACATTACCGCATAATACCATGCGTCCAACTCTCTTTCCTTATGTCTAATCTTAGCTACAAGTCTTTCTCTTCTGTGAACACACATCCGATGATATGATTTACCCTTAATAACCAAATCCAACTCAAGACCTTTGTCACACCCCATCCCAGATGCACTCTATACCTAGGATTGAGCGTGATACTGTACTCCCTATATACATATTTGAAATTAGACGCCAGATAAATCTCAAATTCAAAACACCATTTCTATTAAAACATTAGAAAAACATACAATCTCTCAACAAGTATTCTCTGCATATATATATAAGATACAAAACAACTCCCCATCAATTCTAAGAAACATGTACGTTACAAAACATGAGCACAGACTAAATATTTACAACTATCCCAGAGGTTTGCTTCCAGATAGGCTCAGACGAGATACTTCTATAGGCTAGGCGTCCCGGACACGCTCGCTACCTGAAACGACAAACAAACAAACAAACTGAGTGAGCAAAAAGCCCAGTGAGTGACTAAATTCATTCAACTATCATTAACAAACATGAGCTAGCTTAACCATTTGTAACCATTACATATCGCATTTCAAAGAGTTACTAAAGTTCTCATTTCTAATTACACATATAAATGTCAAATCATCATGTTTCACAGATTTGCAACTATCAGGTGTCTTCATATTCTGTCCCTCAGCACCGTATTCGATTATGTCTACATTACCATGTGCCTTCACACGAAGTCCCTCAGCACTGGTAACTAATTCATTCTTTGCTCAAGTGCCTTCACTCATGGTCCCTCAGCACGAATTATTATGTGATGGACTACTACATGCTTTCACTCAAAGTCCTTCAGCATTGAAATCCATTCCACTTAACTATTCAAGTGCTTTCACACGGGGTCCCTCAGCACTGAATTTCATGTGTACATTCACTTAGGCTTTCACCATAAGGTCCCTCAGCCATATTTACATTTGGACAATAAAATTTGTTTCCTTTTAACTTGCTGGCATAACATACTTACCATAGATACTACAGAGTACTATAATTCTTACCAAGTAATTATACTAAAAGTAACTACAAGATCTAGTAAAAGGTCACTCACAACTTGTCTCGGTTCTAAGTGGATTATAAGCTTCCCCGAGCTCTTCCTAACCTGAAAATACTATTTCTCACCGCATAGTGGCCTCATAGCAAGTTGGCTCCCAACACCTCGTGGCCTTCAACTTCCAACGCCCAACAGCCTTTAATGCGTTTGTCGCAAGATCACCTTCGGTGCAAGGTGGCTCTCCACACCTTGTGACCTCAACGCGTCGTGGCCTCAACGCCTAATGGTCTTCCCTCACCTTTGCGTCCACGCCAGAACTGCTTCCATCAAGGCGCGTTGTCACCAACGCATAGCTGGTACTTAGTCATTTTTTCGCCCCCAATCACATTCCAGTCAACTACTCCTACCTATGCGTCCATCTCTAGTTCTCTTCTTACCTTGCTTTCTCACAAGATTAAGTACAGGGCTTACAACCTTCCTCTATGCGTTTGCATTCTTTGCGTTTACCTTTACTTCGTTCTGCATCCATGACCTTTTTCCTATCCTTGAGGATTCCTTGATTATCCCTTTGTGCGTCCTTGAGTTATATTCCAAGGTTATTCCTTTAACCTTTTCCTTGTACTTAACTATTTCTCTTATAATAAATTAGTATGCATCCACCTCCTGCTTCCAGTCTTTAAGCTTACTTCTCAACCTTCTACTTTATCCAACACTTGAGAATATCCCTCGATAGAAGTCTATGCGTTACTCAGTTTGCAATAGTATTCTTCCTCCGATTTCTCTTTATGCCTCTATCCTTTCTTTCCGAGACTTAGATTTCTTTCCAACACTCCATGACTTAACTTTATTCCTTTTTACTTATATGTCCTACCTTCGCCAAAGCTACATTTACTTCCTTAACTACTTCCTATGCGTTTACCCGAAATCGAGGTTACATTTCCATTTTATCATGGAGTTAAGCTTCACAACGCATAGCTGGTAGCCACCTTCAACGCATAGCCTTAACAATCCATGGTAGCCACTCTCAACGCATAGCAACCCTTAAATCATAGCTACCCTGAACGCTTGATGACCTTATCTGCGTTTGTTATGATATACCCGAAGACTTCTTTACCAACACCAAAATCCTTAGTAACGCATAATAAACCTTCAACGTATGTTGCTCACGCCTTGAGGTTTTTTTACTTCTCTTATCTTTCTATCTTAACATCCTCCAAAACCATTCTCATCACTTGTTAATTTCCAAGACCAAGTGTGAGCCATGCGATTTCCTCTTCTTCCTAATTCTCGTGTTCCTTTTCCAATCTTCAATATCAAATTTCTTCCAAAATAAAATACCATGCGTTAACGCTTTACCATCTATGCGTCAACCTGACTATGTTCCACAGATACATCTAACTTTTAACTAATTCCCAACTATGCCTTCAATTCTTCATTCTCACTCTTAGTGAAATATCCATTCTTTTCCTAATACTATGCGTTCAACTAGTCTTCTTATCGCATAGTGATACTTCCTAAACTTAGTTGACACACTCAAAAGATTTCCTAAGTCCTTAGATCACCTTGCCATTCAAAATCACTTAACATAATTCTTTCCAAACTTCTTAACGCCTTCTTCTTAAACCAAAACTTCAGCTTACAATTCACTCTTTTTCCTTCCATTCATCTCAATGCATAGAATTCCTTGGCCAATAATTCTGCAATTCCGCAAACATAACTTTTCAACCTTAAGAATTTCCTAACTCCACATACTTATAATCTTAGCTCCACTTCTTGTCTTTCTTTTCTTACTAGCCATCATAAGTACCTAGGTTCTGAGATAGGGTATTACACCTTATTGCCGAAGCACTTTAAACCTTGTATTCATTCTTTCTTTTTCTTCTCTTAATCTTGTTTACAAATCATCTTCTGCGCATACAATCTCCATTGAAGTAATCTTCAAATGAGCATTTCAATTTCCTCGACAACTTCTTTTAGTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGTATCAGAGCCATTGAGAGAATTACCAAGAAGCAGTTTCTTGAATCAAAGAATGGCAACAACAATAACTGTAGACACCGTATTTTGTTCGGCCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTATTTTGGATAACATATATTTTAGATTAGTCTTTTTATAAAAAAAAATGGGTTTAGAAACAAAGTTTTTCCTTAAGTTTTTGAAACTTTTAAAAAGATGTAAAAATATATATATATATTAAAAATGAAAAAAATATTACTTTTCTTCCCTTTTCCCATTCTTCCTCTTTTCCCCATTTCTCTACTTCTCTTCCTTTTCTTCCCCAATTCTCTCCTCTTCTTCATACTTCCTCTATTTCCTCTCTTCCCCATTTCAAATTCCTTACAAAGCTCAACTCTCAACCTTAACACTCCCCTATAAATTGATGGGGATTCACAATGGAAAAAAAGGGGGAGAAAACACAAAATGTGGAAGAGTCATTATACACATTGAGGGAGAAATAGACAGAAAGGAATAACTGAGAAAGAGATGATCCCGTAAAAACCTCATTTTCATTAGATGGATCATGCACAATTCCAACGAAACTCACACAAAACCCACTAATACAATGCAGCCCGACAATGTCTTAAACAAACAGGAATTTCCGACGAAGCCCACGAACGGACGACTCCGACAACAAACCTCACACCAACAGTGTTTTAGTGGTGGATATCTTGCATGCTTGCAACTTGGGATGATTTCTTACCTACAGTAAAAGAAAATAAAAGGAGAGAAGTGAAAAAAGAAGTGAAGTAAGAAGAAGAAGTACTTGGACAAGAAAGAAGAAAAGTAAATAAGAAAAAAAAAAAAAAAAGATAAAGGTGATGAGTTCCACCCACATTTTTCTCTCTTTATTTGTTGATAATTTATTGGCATTAACTTAATTTTTGAACAAATTCAAAATATGTTTCAATTAATTTATTCTTAAAGACTCCATTGATCTTTTAAAGTAAATTCTAACTTTATTTCCAATTTAAACTTGATTTCTCCTTAATTTGATTCTTCTCATTAGTAGGATTTCAAATCTTCATTTTGTTTTAATCTCCGATTTATGATACAAAATGGATCTCGTTCTATTGTTGATTAGAGATTTCTCTATGAACAATACGAATCGAAGTTTAAAAAAGAGGAAGGAGAAGGAGTCCTCGACCCGCAATAGATAGAGGAGGATTTATTCAATCACATTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGCTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTCATGTCTTCATCCATAGGGTCCCAAGTACCCGGATCAATCAAAAGTTCGATTCTATCTGAACTACTCATTTTCAAATGGTATCCACATTGGTCACAAATATTCAGTTTTGATTTCAACAATTTCTTATAATTTAATCCATAACAATTTTCGCATTGAACCCACAAATGCCTGTATTTTTGAGTTACATCTAGATCATTAGAACTTTCTGTTCTAGTTAAATCACTTCCATCCGTGCTAGTTCTTATATTGGAACTCTCACTTTCACTACTATTTCCACCTTCACCACAAATATAACTATAAATGTAACTGTCACTGTAATTGTGACTACCACTTAAAATGTAACTATCAATAGAGATTTGAGCCCGAAGATAACTGTCAATGCAACTATTAATGTGATTATTCCAACTATATTTAGTATCATACATGTAACGATCATAGTGGGAATCATCACTCTTAGATACATTATTTTGTTTAGGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGA

mRNA sequence

ATGGAAGCATTAGGATTGCGATCAATAGCCTCCAAACATATGTGGACGAATGAAGAGGATAGAATTCTGGTAAGCCCCAATTTAGAGTCCAGGGTGAGGACGTTGAAGAGACAATGCAACCCGATCGTTGAAATGTTGGGCCTAGGATATAGTGGGTTCGGTTGGAAAGCGAAGCGGAAGTGTATTGACTGTGAGCCTGAGATATTCGATGCGTGGGTCAGGCCAAAACATAACACATTTCATTTGATGCAAAGTTATCCAAGTGCCAAAGGTCTCAGGCATAAGTCATTTCCATTCTTTGATGACCTGGCAATTGTATTTGGCAAAGATAGAGCAATAGGGAATCGTGCCACTACCACTGCTGAGAAAATGTGGCATGTTGAACTCTCCTCTCCCAAATTTCTCTCTCCTCTCCCAAGCACCCCCTTGAACTATTTGATGCCAAGGATGAAACAATTGTTTCCAAATATCAATTGGCACAAGGGCAAAGGAATGAACTTTCATTTTGCAAAGCCTGAGTTAAAGACAAAAGCTGGAATTATTGGTGGTATGTGGAAAAGACCATCAAACCTCAAAAGTAGACCAATGGGGAATAACACAAGCCTTGATGACATCCTTCTCTACACGGACTCATATCAAAGCCTATACTTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGCTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTCATGTCTTCATCCATAGGGTCCCAAGTACCCGGATCAATCAAAAGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGA

Coding sequence (CDS)

ATGGAAGCATTAGGATTGCGATCAATAGCCTCCAAACATATGTGGACGAATGAAGAGGATAGAATTCTGGTAAGCCCCAATTTAGAGTCCAGGGTGAGGACGTTGAAGAGACAATGCAACCCGATCGTTGAAATGTTGGGCCTAGGATATAGTGGGTTCGGTTGGAAAGCGAAGCGGAAGTGTATTGACTGTGAGCCTGAGATATTCGATGCGTGGGTCAGGCCAAAACATAACACATTTCATTTGATGCAAAGTTATCCAAGTGCCAAAGGTCTCAGGCATAAGTCATTTCCATTCTTTGATGACCTGGCAATTGTATTTGGCAAAGATAGAGCAATAGGGAATCGTGCCACTACCACTGCTGAGAAAATGTGGCATGTTGAACTCTCCTCTCCCAAATTTCTCTCTCCTCTCCCAAGCACCCCCTTGAACTATTTGATGCCAAGGATGAAACAATTGTTTCCAAATATCAATTGGCACAAGGGCAAAGGAATGAACTTTCATTTTGCAAAGCCTGAGTTAAAGACAAAAGCTGGAATTATTGGTGGTATGTGGAAAAGACCATCAAACCTCAAAAGTAGACCAATGGGGAATAACACAAGCCTTGATGACATCCTTCTCTACACGGACTCATATCAAAGCCTATACTTCTACACCATCAATCCTTGGCTAACAACCAAACAAACACTCACAACTGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTACCTAGAGCAATAGGTGCTGTAGAGAAACTGATTGCAAAAGAGGGGAAATCGGCCACACTAAAATTACCTTCTGGGGAGGTCTGTTTGATATCCAAGAATTGCTCAGCAACAGTCGAACAAGTGGAGAATGCTGGGGTAAACCAGAAAAGTCATGTCTTCATCCATAGGGTCCCAAGTACCCGGATCAATCAAAAGAAACGGAGGCGTGCAAAGGTTTCCTCGAGCCAGACAAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGA

Protein sequence

MEALGLRSIASKHMWTNEEDRILVSPNLESRVRTLKRQCNPIVEMLGLGYSGFGWKAKRKCIDCEPEIFDAWVRPKHNTFHLMQSYPSAKGLRHKSFPFFDDLAIVFGKDRAIGNRATTTAEKMWHVELSSPKFLSPLPSTPLNYLMPRMKQLFPNINWHKGKGMNFHFAKPELKTKAGIIGGMWKRPSNLKSRPMGNNTSLDDILLYTDSYQSLYFYTINPWLTTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENAGVNQKSHVFIHRVPSTRINQKKRRRAKVSSSQTKIGPRVQRQKGA

Homology

[Close]

BLAST of Cla97C02G036960 vs. NCBI nr
Match: XP_038902067.1 (indole-3-acetic acid-amido synthetase GH3.5-like [Benincasa hispida])

HSP 1 Score: 122.1 bits (305), Expect = 9.3e-24
Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 144 NYLMPRMKQLFPNINWHKGKGMNFHFAKPELKTKAGII-----GGMWKRPSNLKSRPMGN 203
           NY+MPRMKQLFPNINW KGKGMNFHFAKPE KTKAGII       + KR SNLKS+P+GN
Sbjct: 127 NYMMPRMKQLFPNINWQKGKGMNFHFAKPEFKTKAGIIVRSIFTSLHKRSSNLKSKPIGN 186

Query: 204 NTSLDDILLYTDSYQSLY 217
           NTS DDI+L TDS+QSLY
Sbjct: 187 NTSPDDIILCTDSFQSLY 204

[Close]

BLAST of Cla97C02G036960 vs. NCBI nr
Match: QTF74869.1 (ribosomal protein L2 [Corydalis bungeana] >QTF74890.1 ribosomal protein L2 [Corydalis bungeana])

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-22
Identity = 68/104 (65.38%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 196 MGNNTSLDDILLYTDSYQSLYFYTINPWLTTKQTLTTGTAIHNIEITLGKGGQLPRAIGA 255
           MGN   L ++L+     +S           T   +  GTAIHNIEITLGKGGQL RA GA
Sbjct: 126 MGNALPLKEVLIDQKKEES-----------TSTDMPLGTAIHNIEITLGKGGQLARAAGA 185

Query: 256 VEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENAGVNQKS 300
           V KLIAKEGKSATLKLPSGEV LISKNCSATV QV NAGVNQKS
Sbjct: 186 VAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKS 218

[Close]

BLAST of Cla97C02G036960 vs. NCBI nr
Match: QDH07784.1 (ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 8.7e-22
Identity = 63/78 (80.77%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 222 PWLTTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISK 281
           P  +T   +  GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISK
Sbjct: 129 PLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 188

Query: 282 NCSATVEQVENAGVNQKS 300
           NCSATV QV NAGVNQKS
Sbjct: 189 NCSATVGQVGNAGVNQKS 206

[Close]

BLAST of Cla97C02G036960 vs. NCBI nr
Match: KAG6758775.1 (hypothetical protein POTOM_035235 [Populus tomentosa])

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-21
Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 225 TTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCS 284
           +T   +  GTAIHNIEITLG+GGQL RA+GAV KLIAKEGKSATLKLPSGEV LISKNCS
Sbjct: 174 STSTDIPLGTAIHNIEITLGRGGQLARAVGAVAKLIAKEGKSATLKLPSGEVRLISKNCS 233

Query: 285 ATVEQVENAGVNQKS 300
           ATV QV NAGVNQKS
Sbjct: 234 ATVGQVGNAGVNQKS 248

[Close]

BLAST of Cla97C02G036960 vs. NCBI nr
Match: YP_009474013.1 (ribosomal protein L2 [Itoa orientalis] >YP_009474035.1 ribosomal protein L2 [Itoa orientalis] >AVK40677.1 ribosomal protein L2 [Itoa orientalis] >AVK40699.1 ribosomal protein L2 [Itoa orientalis])

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-21
Identity = 72/126 (57.14%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 174 LKTKAGIIGGMWKRPSNLKSRPMGNNTSLDDILLYTDSYQSLYFYTINPWLTTKQTLTTG 233
           L T+  IIG      + +  + MGN   L ++L+  D  +           +T   +  G
Sbjct: 103 LHTRGAIIGDTIISGTEVPIK-MGNALPLSEVLI--DQKEE----------STSTDMPLG 162

Query: 234 TAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 293
           TAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 163 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 215

Query: 294 GVNQKS 300
           GVNQKS
Sbjct: 223 GVNQKS 215

[Close]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-24
Identity = 61/67 (91.04%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
           AGVNQKS
Sbjct: 196 AGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.6e-24
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 137 GTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 196

Query: 293 AGVNQKS 300
           AGVNQKS
Sbjct: 197 AGVNQKS 203

[Close]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot
Match: Q14FB6 (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.6e-24
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
           AGVNQKS
Sbjct: 196 AGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot
Match: A4GYV2 (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.6e-24
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
           AGVNQKS
Sbjct: 196 AGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot
Match: Q8S8V3 (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-23
Identity = 60/67 (89.55%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
            GVNQKS
Sbjct: 196 VGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL
Match: A0A513X1K1 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.2e-22
Identity = 63/78 (80.77%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 222 PWLTTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISK 281
           P  +T   +  GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISK
Sbjct: 129 PLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 188

Query: 282 NCSATVEQVENAGVNQKS 300
           NCSATV QV NAGVNQKS
Sbjct: 189 NCSATVGQVGNAGVNQKS 206

[Close]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL
Match: A0A2P1CRN3 (50S ribosomal protein L2, chloroplastic OS=Itoa orientalis OX=179731 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.2e-22
Identity = 72/126 (57.14%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 174 LKTKAGIIGGMWKRPSNLKSRPMGNNTSLDDILLYTDSYQSLYFYTINPWLTTKQTLTTG 233
           L T+  IIG      + +  + MGN   L ++L+  D  +           +T   +  G
Sbjct: 103 LHTRGAIIGDTIISGTEVPIK-MGNALPLSEVLI--DQKEE----------STSTDMPLG 162

Query: 234 TAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVENA 293
           TAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV NA
Sbjct: 163 TAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNA 215

Query: 294 GVNQKS 300
           GVNQKS
Sbjct: 223 GVNQKS 215

[Close]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL
Match: A0A7G9IT78 (50S ribosomal protein L2, chloroplastic OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22
Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 225 TTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCS 284
           +T   +  GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCS
Sbjct: 141 STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCS 200

Query: 285 ATVEQVENAGVNQKS 300
           ATV QV NAGVNQKS
Sbjct: 201 ATVGQVGNAGVNQKS 215

[Close]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL
Match: A0A650FCJ1 (50S ribosomal protein L2, chloroplastic OS=Abatia parviflora OX=112815 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22
Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 225 TTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCS 284
           +T   +  GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCS
Sbjct: 141 STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCS 200

Query: 285 ATVEQVENAGVNQKS 300
           ATV QV NAGVNQKS
Sbjct: 201 ATVGQVGNAGVNQKS 215

[Close]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL
Match: A0A7D5YQU6 (50S ribosomal protein L2, chloroplastic OS=Aspidopterys obcordata OX=648862 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.3e-22
Identity = 62/75 (82.67%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 225 TTKQTLTTGTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCS 284
           +T   +  GTAIHNIEITLGKGGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCS
Sbjct: 144 STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCS 203

Query: 285 ATVEQVENAGVNQKS 300
           ATV QV NAGVNQKS
Sbjct: 204 ATVGQVGNAGVNQKS 218

[Close]

BLAST of Cla97C02G036960 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
            GVNQKS
Sbjct: 196 VGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-24
Identity = 59/67 (88.06%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATLKLPSGEVCLISKNCSATVEQVEN 292
           GTAIHNIEITLG+GGQL RA GAV KLIAKEGKSATLKLPSGEV LISKNCSATV QV N
Sbjct: 136 GTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN 195

Query: 293 AGVNQKS 300
            GVNQKS
Sbjct: 196 VGVNQKS 202

[Close]

BLAST of Cla97C02G036960 vs. TAIR 10
Match: AT5G54510.1 (Auxin-responsive GH3 family protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.1e-06
Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 146 LMPRMKQLFPNINWHKGKGMNFHFAKPELKTKAGI----IGGMWKRPSNLKSRPMG---N 205
           LMP M Q  P ++  KGKGM F F K E KT  G+    +   + + S+ K+RP     N
Sbjct: 137 LMPVMDQFVPGLD--KGKGMYFLFIKSESKTPGGLPARPVLTSYYKSSHFKNRPYDPYTN 196

Query: 206 NTSLDDILLYTDSYQSLYFYTINPWLTTKQTLTTG 234
            TS +  +L +DSYQS+Y   +      K+ L  G
Sbjct: 197 YTSPNQTILCSDSYQSMYSQMLCGLCQHKEVLRVG 229

[Close]

BLAST of Cla97C02G036960 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATL-KLPSGEVCLISKNCSATVEQVE 292
           GT IHNIE+  G+G ++ RA G   K++ +  K   L KLPSG+   I+  C AT+  V 
Sbjct: 71  GTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVS 130

[Close]

BLAST of Cla97C02G036960 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 233 GTAIHNIEITLGKGGQLPRAIGAVEKLIAKEGKSATL-KLPSGEVCLISKNCSATVEQVE 292
           GT IHNIE+  G+G ++ RA G   K++ +  K   L KLPSG+   I+  C AT+  V 
Sbjct: 71  GTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVS 130

The following BLAST results are available for this feature:

BLAST of Cla97C02G036960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902067.1	9.3e-24	75.64	indole-3-acetic acid-amido synthetase GH3.5-like [Benincasa hispida]	[more]
QTF74869.1	6.6e-22	65.38	ribosomal protein L2 [Corydalis bungeana] >QTF74890.1 ribosomal protein L2 [Cory...	[more]
QDH07784.1	8.7e-22	80.77	ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis...	[more]
KAG6758775.1	1.5e-21	81.33	hypothetical protein POTOM_035235 [Populus tomentosa]	[more]
YP_009474013.1	1.5e-21	57.14	ribosomal protein L2 [Itoa orientalis] >YP_009474035.1 ribosomal protein L2 [Ito...	[more]

BLAST of Cla97C02G036960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK5	4.3e-24	91.04	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
Q14F95	9.6e-24	89.55	50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=...	[more]
Q14FB6	9.6e-24	89.55	50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=...	[more]
A4GYV2	9.6e-24	89.55	50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa OX=3694 GN=rpl2-A...	[more]
Q8S8V3	1.3e-23	89.55	50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna OX=33113 GN=rpl2-...	[more]

BLAST of Cla97C02G036960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A513X1K1	4.2e-22	80.77	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 ...	[more]
A0A2P1CRN3	7.2e-22	57.14	50S ribosomal protein L2, chloroplastic OS=Itoa orientalis OX=179731 GN=rpl2 PE=...	[more]
A0A7G9IT78	9.3e-22	82.67	50S ribosomal protein L2, chloroplastic OS=Lagenaria siceraria var. microcarpa O...	[more]
A0A650FCJ1	9.3e-22	82.67	50S ribosomal protein L2, chloroplastic OS=Abatia parviflora OX=112815 GN=rpl2 P...	[more]
A0A7D5YQU6	9.3e-22	82.67	50S ribosomal protein L2, chloroplastic OS=Aspidopterys obcordata OX=648862 GN=r...	[more]

BLAST of Cla97C02G036960 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	2.0e-24	88.06	ribosomal protein L2	[more]
ATCG01310.1	2.0e-24	88.06	ribosomal protein L2	[more]
AT5G54510.1	7.1e-06	36.84	Auxin-responsive GH3 family protein	[more]
AT2G44065.1	2.1e-05	42.62	Ribosomal protein L2 family	[more]
AT2G44065.2	2.1e-05	42.62	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 220..327 e-value: 7.9E-9 score: 24.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 230..299 e-value: 3.9E-16 score: 59.3
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 192..290 e-value: 1.1E-22 score: 81.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..338
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 21..123
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 229..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G036960.1	Cla97C02G036960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity