Cla97C02G031890 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G031890
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionProtein RADIALIS-like 1
LocationCla97Chr02: 4867330 .. 4867569 (-)
RNA-Seq ExpressionCla97C02G031890
SyntenyCla97C02G031890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

mRNA sequence

ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

Coding sequence (CDS)

ATGGCTTCCATTTCTGCTTTTGGACCAAGCACTCCATGGACTACAAAGCAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGCGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAAGATGTTAAGCATATTGAGTCGGGTGAAATTCCTTTTCCCTATGGAAGCTCTACAAGATAG

Protein sequence

MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYGSSTR
Homology
[Close]
BLAST of Cla97C02G031890 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPSTPWT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPY 75
          DVKHIESGEIPFPY
Sbjct: 61 DVKHIESGEIPFPY 74

[Close]
BLAST of Cla97C02G031890 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.3e-31
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPST WT  QNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEIPFPY  STR
Sbjct: 61 DVKHIESGEIPFPYRRSTR 79

[Close]
BLAST of Cla97C02G031890 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 6.5e-29
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G +  WT KQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVK IESGE+PFPYG S
Sbjct: 61 DVKQIESGEVPFPYGRS 77

[Close]
BLAST of Cla97C02G031890 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 9.4e-28
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT ++NKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+
Sbjct: 1  MASMSAHG-SSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVK 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEI FPY SSTR
Sbjct: 61 DVKHIESGEINFPYRSSTR 78

[Close]
BLAST of Cla97C02G031890 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G ST WT  +NKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DV HIE+G+IPFPY +STR
Sbjct: 61 DVNHIENGQIPFPYRNSTR 78

[Close]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.2e-23
Identity = 45/69 (65.22%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 5  SAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKH 64
          S  G   PW+ K+NKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGEIPFP 74
          IESG++PFP
Sbjct: 63 IESGKVPFP 71

[Close]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-22
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1  MASISAFGPST-PWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS S    S+  WT KQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFP 74
          +D+  IE+G +PFP
Sbjct: 61 QDINSIENGHVPFP 74

[Close]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.7e-22
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 3  SISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          S+S++G S  WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFP 74
          + IE+G +PFP
Sbjct: 65 ESIENGHVPFP 74

[Close]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-21
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-20
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS S+   S+ WT+KQNK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIESGEIPFP 74
          D+ +IE   +P P
Sbjct: 61 DLMNIEQDLVPLP 72

[Close]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS++A GPSTPWT KQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPY 75
          DVKHIESGEIPFPY
Sbjct: 61 DVKHIESGEIPFPY 74

[Close]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 65/77 (84.42%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G +  WT KQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVK IESGE+PFPYG S
Sbjct: 61 DVKQIESGEVPFPYGRS 77

[Close]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match: A0A6J1GKV1 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.5e-28
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT ++NKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+
Sbjct: 1  MASMSAHG-SSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVK 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DVKHIESGEI FPY SSTR
Sbjct: 61 DVKHIESGEINFPYRSSTR 78

[Close]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.8e-28
Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G S+ WT  +NKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYGSSTR 80
          DV HIESG+IPFPY  STR
Sbjct: 61 DVNHIESGQIPFPYRKSTR 78

[Close]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match: A0A6J1C4J2 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS+SA G    W+  QNKAFE+ALAVYD+DTP+RWLNVA AIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMSAHGSDGAWSAMQNKAFERALAVYDEDTPQRWLNVANAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYGSS 78
          DVKHIESGE+PFPY SS
Sbjct: 61 DVKHIESGEVPFPYRSS 77

[Close]
BLAST of Cla97C02G031890 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 105.9 bits (263), Expect = 1.5e-23
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0 

Query: 1  MASISAFGPST-PWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS S    S+  WT KQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFP 74
          +D+  IE+G +PFP
Sbjct: 61 QDINSIENGHVPFP 74

[Close]
BLAST of Cla97C02G031890 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 3.3e-23
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 3  SISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          S+S++G S  WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFP 74
          + IE+G +PFP
Sbjct: 65 ESIENGHVPFP 74

[Close]
BLAST of Cla97C02G031890 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]
BLAST of Cla97C02G031890 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-22
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 11 TPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]
BLAST of Cla97C02G031890 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0 

Query: 1  MASISAFGPSTPWTTKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MAS S+   S+ WT+KQNK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVE
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVE 60

Query: 61 DVKHIESGEIPFP 74
          D+ +IE   +P P
Sbjct: 61 DLMNIEQDLVPLP 72

The following BLAST results are available for this feature:
BLAST of Cla97C02G031890 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0036165.16.3e-3293.24protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-... [more]
KAE8645640.15.3e-3187.34hypothetical protein Csa_020521 [Cucumis sativus][more]
XP_022952074.16.5e-2984.42protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li... [more]
XP_022952660.19.4e-2882.28protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li... [more]
XP_008447026.12.1e-2779.75PREDICTED: protein RADIALIS-like 1 [Cucumis melo][more]
BLAST of Cla97C02G031890 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q58FS34.2e-2365.22Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1[more]
F4JVB82.1e-2267.57Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1[more]
Q9SIJ54.7e-2267.61Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1[more]
Q1A1735.2e-2169.84Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1[more]
Q8GW754.4e-2063.01Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1[more]
BLAST of Cla97C02G031890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3V43.0e-3293.24Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1GKK43.1e-2984.42protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1[more]
A0A6J1GKV14.5e-2882.28protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455288 PE=4 SV=1[more]
A0A0A0K3K07.8e-2881.01SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S... [more]
A0A6J1C4J21.0e-2780.52protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007855 PE=4 SV=1[more]
BLAST of Cla97C02G031890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39250.11.5e-2367.57RAD-like 1 [more]
AT2G21650.13.3e-2367.61Homeodomain-like superfamily protein [more]
AT1G75250.13.7e-2269.84RAD-like 6 [more]
AT1G75250.23.7e-2269.84RAD-like 6 [more]
AT1G19510.13.1e-2163.01RAD-like 5 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 9..61
e-value: 6.4E-7
score: 39.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 12..59
score: 6.132755
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 12..59
e-value: 1.03679E-6
score: 39.481
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 12..57
e-value: 1.6E-5
score: 25.0
NoneNo IPR availableGENE3D1.10.10.60coord: 5..72
e-value: 4.7E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR43952:SF53TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATEDcoord: 1..75
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 1..75
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G031890.1Cla97C02G031890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity