Cla97C02G027540 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTATGTCACTCCTACTCTTTTTTTTTTTTCGTGGAGCGGTTAAAACTACTTTTGTTATATTCATAATCATTTTGAAACATGTTGGATTTCTTATGCGTAGGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATAGGGAGAAAAGGGGCAAAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGACTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATAGGGAGAAAAGGGGCAAAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGACTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA ATGAAGCCTTCCACTTGGTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCCATACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGGTAGCAACAGCAATAACCTCTGGCAAAGCGGCAATGGTGGTGAAAGAGAAGGTTGCGATAGGGAGAAAAGGGGCAAAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGTTCGCCGTGTAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTACAAGAGGCTGAAACATGCCCAATGACTTATAGATGCATGTGTAATAACAAGTCCTATCCTGTTCCTTGA MKPSTWFSILFIAFLLFPIPISSRRISQQNSRHGHHRKVATAITSGKAAMVVKEKVAIGRKGAKTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMTYRCMCNNKSYPVP Homology
BLAST of Cla97C02G027540 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus]) HSP 1 Score: 200.7 bits (509), Expect = 7.3e-48 Identity = 107/125 (85.60%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of Cla97C02G027540 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]) HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46 Identity = 97/120 (80.83%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of Cla97C02G027540 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45 Identity = 102/124 (82.26%), Postives = 106/124 (85.48%), Query Frame = 0
BLAST of Cla97C02G027540 vs. NCBI nr
Match: KAG6572355.1 (Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 92/120 (76.67%), Postives = 99/120 (82.50%), Query Frame = 0
BLAST of Cla97C02G027540 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.6 bits (444), Expect = 2.5e-40 Identity = 92/129 (71.32%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.3e-25 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 37/125 (29.60%), Postives = 55/125 (44.00%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48 Identity = 107/125 (85.60%), Postives = 110/125 (88.00%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 7.3e-46 Identity = 102/124 (82.26%), Postives = 106/124 (85.48%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40 Identity = 92/129 (71.32%), Postives = 99/129 (76.74%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40 Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0
BLAST of Cla97C02G027540 vs. ExPASy TrEMBL
Match: A0A6J1GMI9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455631 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.4e-38 Identity = 84/120 (70.00%), Postives = 91/120 (75.83%), Query Frame = 0
BLAST of Cla97C02G027540 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 ) HSP 1 Score: 115.2 bits (287), Expect = 3.7e-26 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Cla97C02G027540 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein ) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of Cla97C02G027540 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). ) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
BLAST of Cla97C02G027540 vs. TAIR 10
Match: AT2G30370.1 (allergen-related ) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-06 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 0
BLAST of Cla97C02G027540 vs. TAIR 10
Match: AT2G30370.2 (allergen-related ) HSP 1 Score: 47.4 bits (111), Expect = 9.6e-06 Identity = 37/125 (29.60%), Postives = 55/125 (44.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|