Cla97C01G026030 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G026030
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionSET domain-containing protein
LocationCla97Chr01: 36781054 .. 36782770 (-)
RNA-Seq ExpressionCla97C01G026030
SyntenyCla97C01G026030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGATAAGAAAGACGCTGCCAAGCTCGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTATCACCTCCAATACTTCTACTATGGACGTCGCAACAGCCTCTACTTCTACCGCCGCCGACGCTGCTATGGGTACCCACTTTGTTCCTTCTATTACTTGCACATGTTTCTTTTTTCTCCTCGATGTTCGTTCTTTAGGTGTTTGGATTTCATCGTTGTGGTTTTTCGTCTCATTATATAAAAAAATTCATTCTTGCCCCCTTTTGCTTTGTTCACTCAATCCACGACGAATCTCGTAACCCAAATTATTTCTGCTATCTAAATGCACAATTTGTTGTCCGTTCGTCCGTTCTTATTTCTTTGTATAGTTAAAAGAAGGGGTGAGAGGCATGGAGAGCCGACCCCTGAATAAATTTTTCGTTCAATGCACAGTCCACTTTTTTGGCCTGATATGTTGAGGTTTTGCTTCGATTCACTTCATGCACCAGTCTACATACCTAGCCTTATAACTTGAATTTGAAAATTTTTAATTCCTCATGGTATTAATTACGAATGAATAAGAGTATTTAAACACAGGGAGTCTCCCAGAAGATTTGAACCGAGGTAACGGAAACGCTGGAGTGGACTAAACAGAAAGCTAGCAACCGAAATAGCAGATTGAATATACATATAATTAGCAGGATTCAGATGTTAAAGTCGAATTTCCTTTAACCATCCTGAGTTGGGCCTAATAGTAAAAAAAAGAAGCATAGTCCCAATAAATAGCTAGTCCAGGAATTAATATCCTATGAGTTTTTTTCCACCTTCACGTGATTTTCTCGCGAGATTAGTTGGGATGTGCATAAGCTCATGAATATAAAAAAAAAAAAAAAAAAACTCCTATTTCCATTAATTTGATCAATGAGAGAACATAGTGGGGTAATAGGGAAGGATTGTTGCTCAACTTCAATGTACAATTGTTCTGTTCCCTTTTTAATAAAGATCAAAATGTTTTTGTGAGATTTCTTTTGACAGTCTACACTTGGTTTTTTCTTTTTTGTTACTCAACGACGTGCCATTCTAAGCGTAATGCTATTGTTCTATTGTGCTTGTGTGTAAGAGATTGGGTTTTGATTTTAAAATTTTAGAGGAGGTATGTTGTTGTCAGTGCTAATTCTGAGTCTTTCATTTACCTATTGACGGGGTTTTTTAAGAAGAAATCTGCACAAGGTCTTTTAACTCAAATAGTGGCTCCTGCTGAAAACCGACAAATTCTAGACCGTTCATACTTGTTGAAACTATTAATTTGAACTGCTAAATGGTCATTTTTCTGGTAAAAGGAATATAACGAAGTTTGTTTGCATGAGTTTAATGCAACAGTGGAATAATTGTCATTGGTGGTGCTGATGTATATCTATTTATTGCCATTGGGCCTTTCTATCTTTCGTTTGATTTATTTGACAATAGAATTGTTGCAGGCGTTCATTTATTTGTTTGTCTGTTACAGATGTGGAGATGGATGATTGCAGTGGAAGCAACAGGCTGAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGTAAGTGCAAGATAAAGAGGAATCGCCACATTTAA

mRNA sequence

ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGATAAGAAAGACGCTGCCAAGCTCGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTATCACCTCCAATACTTCTACTATGGACGTCGCAACAGCCTCTACTTCTACCGCCGCCGACGCTGCTATGGATGTGGAGATGGATGATTGCAGTGGAAGCAACAGGCTGAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGTAAGTGCAAGATAAAGAGGAATCGCCACATTTAA

Coding sequence (CDS)

ATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGGGCCATCAGGAGAGAGATGGTTGACCCTTTTTACGATAAGAAAGACGCTGCCAAGCTCGCTGCTCAAGAGGCTGCCCTTGCTGCCCCTAAGCTTCCCGTGCGTCCCTCTCCTATCACCTCCAATACTTCTACTATGGACGTCGCAACAGCCTCTACTTCTACCGCCGCCGACGCTGCTATGGATGTGGAGATGGATGATTGCAGTGGAAGCAACAGGCTGAAGCCTGTAGGTGGAATTGGCAAGAAATCCAAAAGAAAATTCAAGGTTGGCAAGGCTAAGCGCCGGGGTAAGTGCAAGATAAAGAGGAATCGCCACATTTAA

Protein sequence

MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Homology
BLAST of Cla97C01G026030 vs. NCBI nr
Match: XP_038877484.1 (uncharacterized protein LOC120069761 [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 112/120 (93.33%), Postives = 112/120 (93.33%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVR SP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA ASTST AD AMDVEMDDCS SN LKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Sbjct: 61  VAQASTSTDADTAMDVEMDDCSRSNTLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120

BLAST of Cla97C01G026030 vs. NCBI nr
Match: XP_008439430.1 (PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo] >KAA0052419.1 uncharacterized protein E6C27_scaffold120G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-46
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRKFKVGKAKRRGKCK+KRNRHI
Sbjct: 61  VALASTSSAPDAAMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRHI 120

BLAST of Cla97C01G026030 vs. NCBI nr
Match: XP_004134518.1 (uncharacterized protein LOC101221511 [Cucumis sativus] >KGN49538.1 hypothetical protein Csa_002864 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP+TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPLTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA  STS+AADAAMDV++DDCS S+ LKPVGG+GKKSKRKFKVGKAKRRGKCK+KRNRHI
Sbjct: 61  VAPPSTSSAADAAMDVDVDDCSRSDVLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRHI 120

BLAST of Cla97C01G026030 vs. NCBI nr
Match: XP_022978967.1 (uncharacterized protein LOC111478758 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNISTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA+AS ST AD+AMDVEM++   S  LK VGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Sbjct: 61  VASASASTNADSAMDVEMNEYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120

BLAST of Cla97C01G026030 vs. NCBI nr
Match: XP_023544802.1 (uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-42
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQQAALAAPKLPVRPSPFTSNISTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA+AS ST AD+AMDVEM+    S  LK VGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Sbjct: 61  VASASASTDADSAMDVEMNGYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120

BLAST of Cla97C01G026030 vs. ExPASy TrEMBL
Match: A0A5A7UG11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00140 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRKFKVGKAKRRGKCK+KRNRHI
Sbjct: 61  VALASTSSAPDAAMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRHI 120

BLAST of Cla97C01G026030 vs. ExPASy TrEMBL
Match: A0A1S3AZE5 (uncharacterized protein LOC103484241 OS=Cucumis melo OX=3656 GN=LOC103484241 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 8.7e-47
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPFTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA ASTS+A DAAMDV+MDDCS SN LKPVGG+GKKSKRKFKVGKAKRRGKCK+KRNRHI
Sbjct: 61  VALASTSSAPDAAMDVDMDDCSRSNTLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRHI 120

BLAST of Cla97C01G026030 vs. ExPASy TrEMBL
Match: A0A0A0KJ42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.6e-46
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRREMVDPFYDKK+AAKLAAQEAALAAPKLPVR SP+TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKEAAKLAAQEAALAAPKLPVRSSPLTSNVSTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA  STS+AADAAMDV++DDCS S+ LKPVGG+GKKSKRKFKVGKAKRRGKCK+KRNRHI
Sbjct: 61  VAPPSTSSAADAAMDVDVDDCSRSDVLKPVGGVGKKSKRKFKVGKAKRRGKCKVKRNRHI 120

BLAST of Cla97C01G026030 vs. ExPASy TrEMBL
Match: A0A6J1IMI5 (uncharacterized protein LOC111478758 OS=Cucurbita maxima OX=3661 GN=LOC111478758 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQEAALAAPKLPVRPSP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPFTSNISTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA+AS ST AD+AMDVEM++   S  LK VGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Sbjct: 61  VASASASTNADSAMDVEMNEYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120

BLAST of Cla97C01G026030 vs. ExPASy TrEMBL
Match: A0A6J1EC45 (uncharacterized protein LOC111432982 OS=Cucurbita moschata OX=3662 GN=LOC111432982 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42
Identity = 104/120 (86.67%), Postives = 109/120 (90.83%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMVDPFYDKKDAAKLAAQEAALAAPKLPVRPSPITSNTSTMD 60
           MAKSMRSKREKRLRAIRR+MVDPFYDKKDAAKLAAQ+AALAAPKLPVRPSP TSN STMD
Sbjct: 1   MAKSMRSKREKRLRAIRRDMVDPFYDKKDAAKLAAQQAALAAPKLPVRPSPSTSNISTMD 60

Query: 61  VATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120
           VA+AS ST AD+AMDVEM+    S  LK VGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI
Sbjct: 61  VASASASTDADSAMDVEMNGYGESTTLKAVGGIGKKSKRKFKVGKAKRRGKCKIKRNRHI 120

BLAST of Cla97C01G026030 vs. TAIR 10
Match: AT1G30880.1 (unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 64/125 (51.20%), Postives = 82/125 (65.60%), Query Frame = 0

Query: 1   MAKSMRSKREKRLRAIRREMV--DPFYDKKDAAKLAAQEAALAAPKLPVRPSPITS---- 60
           MAKSMR KR KRLRAIRRE+V  + F   ++ AK AA EAALAAPKLPVR +P++     
Sbjct: 1   MAKSMRCKRVKRLRAIRREIVEKESFTLTREDAKSAAIEAALAAPKLPVRQAPVSPFMEV 60

Query: 61  NTSTMDVATASTSTAADAAMDVEMDDCSGSNRLKPVGGIGKKSKRKFKVGKAKRRGKCKI 120
            T + + A+AST+ A D+  D EMDD   +  LKP   IGKK K+KFK+G   RR K  +
Sbjct: 61  ATPSSESASASTTIANDS--DEEMDDEKKNKSLKP---IGKKLKKKFKLGMKNRRSKGVL 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877484.12.1e-4793.33uncharacterized protein LOC120069761 [Benincasa hispida][more]
XP_008439430.11.8e-4690.00PREDICTED: uncharacterized protein LOC103484241 [Cucumis melo] >KAA0052419.1 unc... [more]
XP_004134518.12.0e-4588.33uncharacterized protein LOC101221511 [Cucumis sativus] >KGN49538.1 hypothetical ... [more]
XP_022978967.13.2e-4387.50uncharacterized protein LOC111478758 [Cucurbita maxima][more]
XP_023544802.11.6e-4286.67uncharacterized protein LOC111804285 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UG118.7e-4790.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3AZE58.7e-4790.00uncharacterized protein LOC103484241 OS=Cucumis melo OX=3656 GN=LOC103484241 PE=... [more]
A0A0A0KJ429.6e-4688.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538670 PE=4 SV=1[more]
A0A6J1IMI51.5e-4387.50uncharacterized protein LOC111478758 OS=Cucurbita maxima OX=3661 GN=LOC111478758... [more]
A0A6J1EC451.3e-4286.67uncharacterized protein LOC111432982 OS=Cucurbita moschata OX=3662 GN=LOC1114329... [more]
Match NameE-valueIdentityDescription
AT1G30880.11.1e-1451.20unknown protein; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..120
NoneNo IPR availablePANTHERPTHR36320OS04G0611300 PROTEINcoord: 1..117
NoneNo IPR availablePANTHERPTHR36320:SF1OS04G0611300 PROTEINcoord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G026030.1Cla97C01G026030.1mRNA