Cla97C01G010215 (gene) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGAGGAAGCAACTACCATGACTGCAATGATGGTGAGTCCTCAAGGAGGGAAGATTCGATAACGAAACAATGTAGGTTTAATATTGAGATGCTAGTGTTTTTAGGAGTAGATTCAGACTAGTGGTTGTTCTGCACTGAATGGTACTTTGACATTCATAAGTTATTTGATGTGGAAAAGTTAAGGGTGGTTGTCATAAGCTTTGAGGGAAAAGCGATAAGTGGTATGGATGGGCTGTGAATGAAGAACCCTTTCAGGGTGGATGAAGGTAAAGGCTCAAATTTTTGAGAGATTTCAACTGTTGCAGGAGGGGAATTTGTGTGCATGGTTATTTGTCATGAAGTTGGAGGGAAGGATTGCAGATTGTCATGAACTTTCTAAAGGGCTGTGGTGATGCCTTTTAGAACACTTTTTTAATTGGGCTAACTCGTCAAATTAGGGAAGACTTCCTTAGTCGTGGGCTTAAAAAATATTTTGAGGCAAGTCCAACTCATAGAGGATAGGGAGCCAGTGTTCCAATTGGCCCAAGAATCAGAAGATCCAAGTTACGCCACAAACTTAACAAAAGGAGGTGGGAGCGGAAATGGGTTGAATAAAATGACCCAGTCAACAGTATGGAAATCCTCATGTTGAGTGGCTAACTCAATCCTATTCACATTGTGACTTTGCCAGAAAAAAAGGGGTGGAGCGAAGTGGGAGCCTAATTTGAAACAAATATCTAAGAAAGAATTTCATGTGCGAAAAGGGAAGGGGCTTTTTTGCGTTGCAAATTGCAACAAGAAGTATTCAATTGGCCATTGTTGTAAGCTATAAGAGATAAGAATCGTGTTTGCACGTGAAGAGGGAGAAGTCGAGATGGATATAGAGGAATCGGTGTTGGGATTTTCAAGTCTGAGCATGATCAAGCTCAGAGGAAAAGTGGGAGACCACAAGGTTTTAGTACTGATTGACTATGAGACGACCCTTAATTTTATATACATCATGTTGGTTGAATAGTTGAACTTGAACCTTATGCTATTAGAAACAACAAATTCTAGGGTCATCATGGAGAAATGGGGCAACAACAACGGGGCATGGAGTATGATCACAAAGATGATGGTAGAGGATCTCCTCCTGCTTGATTTAGGAGGGGTTATATGATTGGCATTGGGATTTTTGTGTCTGGGCATGATCAAGCTCAAAGTAAAAATGGGAGACCACGATGTTCAGGGCAACCCATAA ATGTCGGAGGAAGCAACTACCATGACTGCAATGATGTGGTTGTTCTGCACTGAATGGTACTTTGACATTCATAAGTTATTTGATGTGGAAAAGTTAAGGGTGGTTGTCATAAGCTTTGAGGGAAAAGCGATAAGTGGGTGGATGAAGGTAAAGGCTCAAATTTTTGAGAGATTTCAACTGTTGCAGGAGGGGAATTTGTGTGCATGGTTATTTGTCATGAAGTTGGAGGGAAGGATTGCAGATTGTCATGAACTTTCTAAAGGGCTGCAAGTCCAACTCATAGAGGATAGGGAGCCAGTGTTCCAATTGGCCCAAGAATCAGAAGATCCAAGTTACGCCACAAACTTAACAAAAGGAGGTGGGAGCGGAAATGGGTTGAATAAAATGACCCAGTCAACAGGAAGGGGCTTTTTTGCGTTGCAAATTGCAACAAGAAGTATTCAATTGGCCATTGTTGGAGAAGTCGAGATGGATATAGAGGAATCGGTGTTGGGATTTTCAAGTCTGAGCATGATCAAGCTCAGAGGAAAAGTGGGAGACCACAAGGTTTTATTGAACTTGAACCTTATGCTATTAGAAACAACAAATTCTAGGGTCATCATGGAGAAATGGGGCAACAACAACGGGGCATGGAGTATGATCACAAAGATGATGGTAGAGGATCTCCTCCTGCTTGATTTAGGAGGGCTCAAAGTAAAAATGGGAGACCACGATGTTCAGGGCAACCCATAA ATGTCGGAGGAAGCAACTACCATGACTGCAATGATGTGGTTGTTCTGCACTGAATGGTACTTTGACATTCATAAGTTATTTGATGTGGAAAAGTTAAGGGTGGTTGTCATAAGCTTTGAGGGAAAAGCGATAAGTGGGTGGATGAAGGTAAAGGCTCAAATTTTTGAGAGATTTCAACTGTTGCAGGAGGGGAATTTGTGTGCATGGTTATTTGTCATGAAGTTGGAGGGAAGGATTGCAGATTGTCATGAACTTTCTAAAGGGCTGCAAGTCCAACTCATAGAGGATAGGGAGCCAGTGTTCCAATTGGCCCAAGAATCAGAAGATCCAAGTTACGCCACAAACTTAACAAAAGGAGGTGGGAGCGGAAATGGGTTGAATAAAATGACCCAGTCAACAGGAAGGGGCTTTTTTGCGTTGCAAATTGCAACAAGAAGTATTCAATTGGCCATTGTTGGAGAAGTCGAGATGGATATAGAGGAATCGGTGTTGGGATTTTCAAGTCTGAGCATGATCAAGCTCAGAGGAAAAGTGGGAGACCACAAGGTTTTATTGAACTTGAACCTTATGCTATTAGAAACAACAAATTCTAGGGTCATCATGGAGAAATGGGGCAACAACAACGGGGCATGGAGTATGATCACAAAGATGATGGTAGAGGATCTCCTCCTGCTTGATTTAGGAGGGCTCAAAGTAAAAATGGGAGACCACGATGTTCAGGGCAACCCATAA MSEEATTMTAMMWLFCTEWYFDIHKLFDVEKLRVVVISFEGKAISGWMKVKAQIFERFQLLQEGNLCAWLFVMKLEGRIADCHELSKGLQVQLIEDREPVFQLAQESEDPSYATNLTKGGGSGNGLNKMTQSTGRGFFALQIATRSIQLAIVGEVEMDIEESVLGFSSLSMIKLRGKVGDHKVLLNLNLMLLETTNSRVIMEKWGNNNGAWSMITKMMVEDLLLLDLGGLKVKMGDHDVQGNP Homology
BLAST of Cla97C01G010215 vs. NCBI nr
Match: KAA0066078.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYJ99819.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 1.5e-04 Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 0
BLAST of Cla97C01G010215 vs. NCBI nr
Match: KAA0033137.1 (polyprotein [Cucumis melo var. makuwa] >TYK17096.1 polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-04 Identity = 51/224 (22.77%), Postives = 98/224 (43.75%), Query Frame = 0
BLAST of Cla97C01G010215 vs. NCBI nr
Match: KAA0037388.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 5.9e-04 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cla97C01G010215 vs. NCBI nr
Match: TYJ97524.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 5.9e-04 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cla97C01G010215 vs. NCBI nr
Match: XP_031745972.1 (uncharacterized protein LOC116406393 [Cucumis sativus]) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-03 Identity = 28/81 (34.57%), Postives = 43/81 (53.09%), Query Frame = 0
BLAST of Cla97C01G010215 vs. ExPASy TrEMBL
Match: A0A5D3BLG2 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00210 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 7.5e-05 Identity = 33/102 (32.35%), Postives = 51/102 (50.00%), Query Frame = 0
BLAST of Cla97C01G010215 vs. ExPASy TrEMBL
Match: A0A5A7SUY2 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00290 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.7e-05 Identity = 51/224 (22.77%), Postives = 98/224 (43.75%), Query Frame = 0
BLAST of Cla97C01G010215 vs. ExPASy TrEMBL
Match: A0A5D3BEN4 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00350 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cla97C01G010215 vs. ExPASy TrEMBL
Match: A0A5A7T3M0 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00950 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-04 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cla97C01G010215 vs. ExPASy TrEMBL
Match: A0A5A7SZC7 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00430 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|