Cla97C01G007650 (gene) Watermelon (97103) v2.5

Overview
NameCla97C01G007650
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr01: 7789687 .. 7789968 (-)
RNA-Seq ExpressionCla97C01G007650
SyntenyCla97C01G007650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGGCCCTTGGGGAAAACAAAGACTTCGCCTTTTCTTATGGTTTTGGAAATCAGTTTGTTGGCGGTGGTTATGAATCCGACATCAAGTTCGCCATCGAGGACGAAGATGATCTCGGTGGCGCGTGGGTGGATGTGTGGTGGATTCAGGCCACCATCGGGCGAGTAGTCTATTCGAGCGAAGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCAACATTGGCCAGCGTAACGGCGGATCCGACGGAGTTGTTGATGGCGGCGGGGTTTGCTAG

mRNA sequence

ATGGAGGAGGCCCTTGGGGAAAACAAAGACTTCGCCTTTTCTTATGGTTTTGGAAATCAGTTTGTTGGCGGTGGTTATGAATCCGACATCAAGTTCGCCATCGAGGACGAAGATGATCTCGGTGGCGCGTGGGTGGATGTGTGGTGGATTCAGGCCACCATCGGGCGAGTAGTCTATTCGAGCGAAGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCAACATTGGCCAGCGTAACGGCGGATCCGACGGAGTTGTTGATGGCGGCGGGGTTTGCTAG

Coding sequence (CDS)

ATGGAGGAGGCCCTTGGGGAAAACAAAGACTTCGCCTTTTCTTATGGTTTTGGAAATCAGTTTGTTGGCGGTGGTTATGAATCCGACATCAAGTTCGCCATCGAGGACGAAGATGATCTCGGTGGCGCGTGGGTGGATGTGTGGTGGATTCAGGCCACCATCGGGCGAGTAGTCTATTCGAGCGAAGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCAACATTGGCCAGCGTAACGGCGGATCCGACGGAGTTGTTGATGGCGGCGGGGTTTGCTAG

Protein sequence

MEEALGENKDFAFSYGFGNQFVGGGYESDIKFAIEDEDDLGGAWVDVWWIQATIGRVVYSSEGNAEGVEAGDFVNIGQRNGGSDGVVDGGGVC
Homology
BLAST of Cla97C01G007650 vs. NCBI nr
Match: RWV81621.1 (hypothetical protein GW17_00056938, partial [Ensete ventricosum])

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-09
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 0

Query: 1  MEEALGENKDFAFSYGFGNQFVGGGYESDIKFAIEDEDDLGGAWVDVWWIQATIGRVVYS 60
          +++A GE++D A   G G+Q VGGG E+ ++ A+E EDDLGGA V V  +Q   G VV +
Sbjct: 5  VDQAAGEDEDVALGDGLGDQLVGGGDEAHVEGAVEHEDDLGGAGVGVRRVQPA-GGVVDA 64

Query: 61 SEGNAEGVEAGDFVNIGQRNGGSDGVVDG 90
            G+A+GVEA D +++G R+ G+ G V G
Sbjct: 65 GHGHAQGVEARDLLHVGGRHQGAHGGVGG 92

BLAST of Cla97C01G007650 vs. NCBI nr
Match: KAG6418092.1 (hypothetical protein SASPL_120291 [Salvia splendens])

HSP 1 Score: 57.8 bits (138), Expect = 5.9e-05
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 7  ENKDFAFSYGFGNQFVGGGYESDIKFAIEDEDDLGGAWVDVWWIQATIGRVVYSSEGNAE 66
          EN+D  F  G G++ VGGG E+D++FA E + DLGGAWV V  ++A  G VV + +G+AE
Sbjct: 10 ENEDVPFLDGLGDEDVGGGDEADVEFAFEHQHDLGGAWVLVGRVEAARG-VVDAGQGDAE 69

Query: 67 GVE 70
           V+
Sbjct: 70 CVD 71

BLAST of Cla97C01G007650 vs. ExPASy TrEMBL
Match: A0A444C6X6 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00056938 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.6e-10
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 0

Query: 1  MEEALGENKDFAFSYGFGNQFVGGGYESDIKFAIEDEDDLGGAWVDVWWIQATIGRVVYS 60
          +++A GE++D A   G G+Q VGGG E+ ++ A+E EDDLGGA V V  +Q   G VV +
Sbjct: 5  VDQAAGEDEDVALGDGLGDQLVGGGDEAHVEGAVEHEDDLGGAGVGVRRVQPA-GGVVDA 64

Query: 61 SEGNAEGVEAGDFVNIGQRNGGSDGVVDG 90
            G+A+GVEA D +++G R+ G+ G V G
Sbjct: 65 GHGHAQGVEARDLLHVGGRHQGAHGGVGG 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RWV81621.11.8e-0946.07hypothetical protein GW17_00056938, partial [Ensete ventricosum][more]
KAG6418092.15.9e-0549.21hypothetical protein SASPL_120291 [Salvia splendens][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A444C6X68.6e-1046.07Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_0005693... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G007650.1Cla97C01G007650.1mRNA