Cla97C01G006740 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G006740
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	F-box protein SKIP28
Location	Cla97Chr01: 6781058 .. 6783420 (+)
RNA-Seq Expression	Cla97C01G006740
Synteny	Cla97C01G006740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGGTATTCACATATCTTCGTGTAAATGCTTGCGTTGTTGATTGGTTTATCTTATCAATGACTTTCTTCATTTTTAGTCACAATGTTAATTTGGCTTTTTTTTATTTTAATTTATACTCCATTAAAATTAAAAAAAAAAAAAATCTTGGTGGCAATGTTCAGAATTTAATAAAAGACTCAAAGGAAATGGATTCAATTAAGTTGGTCTAGTAGTGAATAGAAGTCATGGGTTGTAGGGTAAGGCAGATGTCTAGTGAGCAATGTTTTTTAAGTTGGGCACAATAAAGGACTTAAATTTGCTAAAATTTTATTATATACACCAATTTCTTTTTTTTTTTTTTTTAGGCACACTATATATAAAAGTAATCCATAAAGAAGAGAAAGCATAGTTAGAGTGTTAGAGTGGAAGACCCTTAAACACAATAAATTTTGATTTTTTTTAATTTAATAAATAAGGAAAAAAACTCTCATTATTACTATATTTTAAAAATAATGAAAAAGCCCTAAGACCCAAGCCTTAAAGCCTTAGAGCTTCACAAAAGGCGTGCTCTTCAGGCGCGCCTTATTTTGTGAGCCTCACCTTTTTAAGGCAAGGTGTCAGACTTGCACTTGAGCCTAAGTGCCCCTAGGCGCGCGCCTGAGAGGGCTTTTTAAAATACTACTATTGAGTTTAGTCGAAATGCATGTAAACTAACCGAACACTAAAAAAGAGTTATCCAACCATCTTATTTTAAAAATGATCCCGTCAAACGTGTTAAGAAATCGACAATTAAAAGATAAACAAAAAACGTAAATGGTAGAGAATTGACAAATTTACGTGATTCACTAACAACATATTAGCTACTTCCAAGGGCAGAAGATGAGAGCAGTTTATTATTATTGAGAAGATATTAGATTTCAGAGTGAGACGCTAATAGAGCTAGAGAGTTTATATAGTACATTTTCTAAACTTTAGGACCAAAATCATAAATAACATAAGTACAAATACAACTTAGGTGCGGGGGAGTTGCCCCTAAACCCTCGCTAGGGTGCGTTGCTCTGTACCCTGACTTGCTAACCGGCCAACAAGATTCTTGAATTTGGTCGTTCGAAGCACCAAAGAACAAATTCAAATTATCTCAATAAAACAAGAATGTTTGCTTCAAAGAACAACCCTTTTACTTTGAAAACAGAACATGCTCGATTTTTCCTTCTTGGTTCAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATGTAAGTAGTTCTACTACTGGATTTGTTTGTGAAATTTGTCTTGAAACCTAATATGGATGAGTTGCCATCTGAACTTAGATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA

mRNA sequence

ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA

Coding sequence (CDS)

ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAAATGTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAAGAACAGTCTGA

Protein sequence

MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNIETRSPCLHFLYLAKERCKAGLQQDMLCLNRENVNLAERKENCKHIQVYKFGLSNYCARTV

Homology

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BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_038906463.1 (F-box protein SKIP28 [Benincasa hispida])

HSP 1 Score: 549.3 bits (1414), Expect = 2.5e-152
Identity = 268/303 (88.45%), Postives = 281/303 (92.74%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEP NPAA AGSS  GVR+EAGPPHEALFLVLSYLPLFELLSM +VCVSLRDAVEH
Sbjct: 30  MSENQEPQNPAAAAGSSFPGVRIEAGPPHEALFLVLSYLPLFELLSMSSVCVSLRDAVEH 89

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VDRRLSSRLSDY LGRIARKAGGRLRTLALINCFKISDSG HEVVEKNPLL
Sbjct: 90  DVLPWLHIVVDRRLSSRLSDYRLGRIARKAGGRLRTLALINCFKISDSGFHEVVEKNPLL 149

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTP GVVRAV+TLSQHSHNLKSLMIGGIYNIEN+HLEVLKCHL +NRS  
Sbjct: 150 TKLYVPGCTSLTPGGVVRAVKTLSQHSHNLKSLMIGGIYNIENEHLEVLKCHLLENRS-L 209

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           QQQ+ERQ HHLY EHIDRSKLL NEFQPVIDVQICPKC +IR+VYDCSRERCKIKQE+Q 
Sbjct: 210 QQQEERQQHHLYREHIDRSKLLSNEFQPVIDVQICPKCSEIRSVYDCSRERCKIKQEKQL 269

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNR YCTRH  N
Sbjct: 270 LADCRGCISCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRPYCTRHCQN 329

Query: 301 IET 304
           + +
Sbjct: 330 VSS 331

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BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_008467113.1 (PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo])

HSP 1 Score: 516.5 bits (1329), Expect = 1.8e-142
Identity = 259/330 (78.48%), Postives = 274/330 (83.03%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 300

Query: 301 IETRSPCLHFLYLAKERCKAGLQQDMLCLN 331
            E                   LQQDMLCLN
Sbjct: 301 AE-------------------LQQDMLCLN 302

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BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_004150124.1 (F-box protein SKIP28 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 5.8e-141
Identity = 247/303 (81.52%), Postives = 267/303 (88.12%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEH
Sbjct: 30  MSENQEPPNPASVA---------EAGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEH 89

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLL
Sbjct: 90  DVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLL 149

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  
Sbjct: 150 TKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN 209

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR +LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 210 KQQEWRQVHHLYHEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENL 269

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Sbjct: 270 LADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN 323

Query: 301 IET 304
           + +
Sbjct: 330 VSS 323

[Close]

BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_016903294.1 (PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo])

HSP 1 Score: 510.8 bits (1314), Expect = 9.9e-141
Identity = 250/302 (82.78%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 293

Query: 301 IE 303
           I+
Sbjct: 301 ID 293

[Close]

BLAST of Cla97C01G006740 vs. NCBI nr
Match: KAA0046341.1 (F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa] >TYK30504.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 510.0 bits (1312), Expect = 1.7e-140
Identity = 249/303 (82.18%), Postives = 266/303 (87.79%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 294

Query: 301 IET 304
           + +
Sbjct: 301 VSS 294

[Close]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-53
Identity = 114/281 (40.57%), Postives = 156/281 (55.52%), Query Frame = 0


Query: 29  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHS 148
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPGC+ LTP G++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQ 208
           H L++L I G+     QHL  L  +L                                 +
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYL-------------------------------SSE 196

Query: 209 PVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDE 268
             ID+++CPKC ++R +  CSRE C  KQ +     CRGC  C+PRC EC  C+   D E
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 IEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI 302
            +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Sbjct: 257 SQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEI 261

[Close]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.5e-32
Identity = 83/259 (32.05%), Postives = 137/259 (52.90%), Query Frame = 0


Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEF 208
             +K L + G++ +   H  E++      N+ +Q  Q+ R +H         + + C++ 
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFYHR------GEACVSCDD- 380

Query: 209 QPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEI 268
              +D+++CPKC + + VYDC  E CK K++     +CR C  C+ RC  CG C+ D E 
Sbjct: 381 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSE--ECRACSLCIQRCYHCGRCIIDTEY 440

Query: 269 EEAVCAGILCSSCWLQLPK 286
           EE  C  +LC+ C    PK
Sbjct: 441 EEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.8e-29
Identity = 91/257 (35.41%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 26  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLG 85
           G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 86  RIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL- 145
           ++ R+A G +R L L  C  I+D GL +V+  NP LTKL V GC  L+ AG+V  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 146 SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLC 205
           S +   +KSL+ GG      +  + L   L  +     Q+++++ +        RS+   
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSC-----RSEFYL 304

Query: 206 NEFQPVIDVQICPKCYDIRNVYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVD 265
            E   V D++ICP C     V+DC  + C +K Q   +   CR C+ C+ RC ECG C++
Sbjct: 305 -EDDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLN 364

Query: 266 DDEIEEAVCAGILCSSC 280
           D E  +  C    C  C
Sbjct: 365 DCE-NKPFCFAFSCVVC 374

[Close]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot
Match: A2RT62 (F-box/LRR-repeat protein 16 OS=Mus musculus OX=10090 GN=Fbxl16 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.8e-05
Identity = 34/126 (26.98%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 51  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSG 110
           C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G
Sbjct: 252 CINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG 311

Query: 111 LHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVL 170
           +  VV   P LT L + GC+ +T  G    VE ++++   L+SL +     I +  LE +
Sbjct: 312 VVNVVHSLPNLTSLSLSGCSKVTDDG----VELVAENLRKLRSLDLSWCPRITDMALEYV 371

Query: 171 KCHLFK 176
            C L +
Sbjct: 372 ACDLHR 373

[Close]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot
Match: Q5MJ12 (F-box/LRR-repeat protein 16 OS=Rattus norvegicus OX=10116 GN=Fbxl16 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.8e-05
Identity = 34/126 (26.98%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 51  CVSLRDAVEHDVLPWLHILVDRRLSS-RLSDYTLGRIARKAGGRLRTLALINCFKISDSG 110
           C+++ D     +   L  L +  L +  ++D  L     + G    TL L++C++I++ G
Sbjct: 252 CINVADDAIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLLSCWEITNHG 311

Query: 111 LHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVL 170
           +  VV   P LT L + GC+ +T  G    VE ++++   L+SL +     I +  LE +
Sbjct: 312 VVNVVHSLPNLTSLSLSGCSKVTDDG----VELVAENLRKLRSLDLSWCPRITDMALEYV 371

Query: 171 KCHLFK 176
            C L +
Sbjct: 372 ACDLHR 373

[Close]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL
Match: A0A1S3CSR5 (F-box protein SKIP28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 8.7e-143
Identity = 259/330 (78.48%), Postives = 274/330 (83.03%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 300

Query: 301 IETRSPCLHFLYLAKERCKAGLQQDMLCLN 331
            E                   LQQDMLCLN
Sbjct: 301 AE-------------------LQQDMLCLN 302

[Close]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL
Match: A0A0A0KSU6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.8e-141
Identity = 247/303 (81.52%), Postives = 267/303 (88.12%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEH
Sbjct: 30  MSENQEPPNPASVA---------EAGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEH 89

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLL
Sbjct: 90  DVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLL 149

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS  
Sbjct: 150 TKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN 209

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR +LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 210 KQQEWRQVHHLYHEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENL 269

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Sbjct: 270 LADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN 323

Query: 301 IET 304
           + +
Sbjct: 330 VSS 323

[Close]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL
Match: A0A1S4E4Z1 (F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 4.8e-141
Identity = 250/302 (82.78%), Postives = 266/302 (88.08%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 293

Query: 301 IE 303
           I+
Sbjct: 301 ID 293

[Close]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL
Match: A0A5A7TYB5 (F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00470 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 8.2e-141
Identity = 249/303 (82.18%), Postives = 266/303 (87.79%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRSQ 
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           +QQ+ RQ HHLYHEH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 294

Query: 301 IET 304
           + +
Sbjct: 301 VSS 294

[Close]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL
Match: A0A6J1FGL5 (F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.8e-133
Identity = 240/305 (78.69%), Postives = 263/305 (86.23%), Query Frame = 0


Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSEN + PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV H
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLH++VDR LSSRL+DY LGRIARKA GRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQ 180
           TKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL KNRSQQ
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLKNRSQQ 180

Query: 181 QQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           QQQQ+ Q    +HEHI+ SKLL N++  +IDV++CPKC +I  VYDCSRERCKIKQE+++
Sbjct: 181 QQQQQ-QRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKS 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
             +CRGC  CVPRCEECGGCVD DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRH  N
Sbjct: 241 GAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 IETRS 306
           + + S
Sbjct: 301 VGSSS 304

[Close]

BLAST of Cla97C01G006740 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 8.8e-55
Identity = 114/281 (40.57%), Postives = 156/281 (55.52%), Query Frame = 0


Query: 29  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHS 148
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPGC+ LTP G++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQ 208
           H L++L I G+     QHL  L  +L                                 +
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYL-------------------------------SSE 196

Query: 209 PVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDE 268
             ID+++CPKC ++R +  CSRE C  KQ +     CRGC  C+PRC EC  C+   D E
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 IEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI 302
            +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Sbjct: 257 SQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEI 261

[Close]

BLAST of Cla97C01G006740 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-33
Identity = 83/259 (32.05%), Postives = 137/259 (52.90%), Query Frame = 0


Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLKSLMIGGIYNIENQHL-EVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEF 208
             +K L + G++ +   H  E++      N+ +Q  Q+ R +H         + + C++ 
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFYHR------GEACVSCDD- 380

Query: 209 QPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEI 268
              +D+++CPKC + + VYDC  E CK K++     +CR C  C+ RC  CG C+ D E 
Sbjct: 381 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSE--ECRACSLCIQRCYHCGRCIIDTEY 440

Query: 269 EEAVCAGILCSSCWLQLPK 286
           EE  C  +LC+ C    PK
Sbjct: 441 EEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Cla97C01G006740 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-30
Identity = 91/257 (35.41%), Postives = 134/257 (52.14%), Query Frame = 0


Query: 26  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLG 85
           G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 86  RIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL- 145
           ++ R+A G +R L L  C  I+D GL +V+  NP LTKL V GC  L+ AG+V  +  L 
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLK 244

Query: 146 SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLC 205
           S +   +KSL+ GG      +  + L   L  +     Q+++++ +        RS+   
Sbjct: 245 SSNRLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSC-----RSEFYL 304

Query: 206 NEFQPVIDVQICPKCYDIRNVYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGCVD 265
            E   V D++ICP C     V+DC  + C +K Q   +   CR C+ C+ RC ECG C++
Sbjct: 305 -EDDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLN 364

Query: 266 DDEIEEAVCAGILCSSC 280
           D E  +  C    C  C
Sbjct: 365 DCE-NKPFCFAFSCVVC 374

The following BLAST results are available for this feature:

BLAST of Cla97C01G006740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906463.1	2.5e-152	88.45	F-box protein SKIP28 [Benincasa hispida]	[more]
XP_008467113.1	1.8e-142	78.48	PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]	[more]
XP_004150124.1	5.8e-141	81.52	F-box protein SKIP28 [Cucumis sativus]	[more]
XP_016903294.1	9.9e-141	82.78	PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]	[more]
KAA0046341.1	1.7e-140	82.18	F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa] >TYK30504.1 F-box pro...	[more]

BLAST of Cla97C01G006740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU90	1.2e-53	40.57	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9LU91	3.5e-32	32.05	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	2.8e-29	35.41	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]
A2RT62	2.8e-05	26.98	F-box/LRR-repeat protein 16 OS=Mus musculus OX=10090 GN=Fbxl16 PE=1 SV=1	[more]
Q5MJ12	2.8e-05	26.98	F-box/LRR-repeat protein 16 OS=Rattus norvegicus OX=10116 GN=Fbxl16 PE=2 SV=1	[more]

BLAST of Cla97C01G006740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSR5	8.7e-143	78.48	F-box protein SKIP28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=...	[more]
A0A0A0KSU6	2.8e-141	81.52	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 ...	[more]
A0A1S4E4Z1	4.8e-141	82.78	F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=...	[more]
A0A5A7TYB5	8.2e-141	82.18	F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1FGL5	2.8e-133	78.69	F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1	[more]

BLAST of Cla97C01G006740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01620.1	8.8e-55	40.57	RNI-like superfamily protein	[more]
AT3G26000.1	2.5e-33	32.05	Ribonuclease inhibitor	[more]
AT3G27290.1	2.0e-30	35.41	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 319..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR13382:SF16	F-BOX PROTEIN SKIP28	coord: 22..313
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 22..313
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 93..170
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 27..182 e-value: 3.5E-13 score: 51.2
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 28..68 e-value: 3.0E-5 score: 23.8
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 244..255
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 28..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G006740.2	Cla97C01G006740.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding
molecular_function	GO:0005515	protein binding