Cla97C01G006550 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G006550
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	10 kDa chaperonin-like
Location	Cla97Chr01: 6488661 .. 6489773 (+)
RNA-Seq Expression	Cla97C01G006550
Synteny	Cla97C01G006550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCGCACCTGAACTCAAGAGCCCTAATTCTTCGAGCACGGACGTATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGGTATCTCCAATGTACCATTCATTCTCTCTGTTATTCCATTTCTTAGCTTCGATTTGATTTCTATTGGGCTTTGCTCCCTTAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGTATGCTTCCAGACAGTATTAGTTTCTTTTCTTGCTCTGTTTGCAGAAATGATCGTCTTTGATTCAAATCTTCCTGCACTTTTTATGCTTATTGTATTTGCATCATTGTCTCTTTATCTTTATTGATTTAAAACAATTGAGGACCAAAATTAATTTGGGCTATAACTGATTATTTGGAACTCCGCAGAGAAAAACAAAGTTCTGGAATCAAATTGAATATTTTGAAAAATTTAAAACGAGATTGGAAGATTCAGGACTAGGCGTAGATTTGAGATAATGATTTTAGAAATTGCTGTTTCTTCCCAAAACTTTCACTGAATCTTTCTCAAATTCATATTAGACTAAGAGTAGGATGCAAATATTAATTTCCTATTTGTTTTCATGATTTTGGTATGAGTTTCTTTTGTGGGGTTTATCTGCAGGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGATGGATTGACCGTTCTGATTCAACAGTGATCTAATTGTGCTTTTGCAAGAGCTCCATTCTGGTACTTTTGAGTTAGTTTTCTTTCATGTTGTAGCTTCTTGTTGAATGTTAGAATGAAGGATATGATCAATTCATGGTTGGTTTTCCATTTCGATAAATCTTAATGGAAACTATTTTTCAGTTCCTCATTGTCATTTCTATGCCTAATCTTTATTCAGCATTTTTCTTGATGGTTGGGAGGAATGGAGAACTATTGTAGTTGATGGCTAA

mRNA sequence

TCCTCGCACCTGAACTCAAGAGCCCTAATTCTTCGAGCACGGACGTATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGACTAGGCGTAGATTTGAGATAATGATTTTAGAAATTGCTGTTTCTTCCCAAAACTGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGATGGATTGACCGTTCTGATTCAACACTTCTTGTTGAATGTTAGAATGAAGGATATGATCAATTCATGCATTTTTCTTGATGGTTGGGAGGAATGGAGAACTATTGTAGTTGATGGCTAA

Coding sequence (CDS)

ATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGACTAGGCGTAGATTTGAGATAATGATTTTAGAAATTGCTGTTTCTTCCCAAAACTGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGATGGATTGACCGTTCTGATTCAACACTTCTTGTTGAATGTTAGAATGAAGGATATGATCAATTCATGCATTTTTCTTGATGGTTGGGAGGAATGGAGAACTATTGTAGTTGATGGCTAA

Protein sequence

MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKETRRRFEIMILEIAVSSQNCSIYLEMKTFWELYMVDGLTVLIQHFLLNVRMKDMINSCIFLDGWEEWRTIVVDG

Homology

[Close]

BLAST of Cla97C01G006550 vs. NCBI nr
Match: XP_038907054.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-35
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPS NRVLIEKILPPSKTSAGILLPESSTKLNSGKV+AVGPGARDNSGNL+PVCV
Sbjct: 1  MAKRLIPSLNRVLIEKILPPSKTSAGILLPESSTKLNSGKVIAVGPGARDNSGNLIPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGTPVKLG+KE
Sbjct: 61 KEGDTVLLPEYGGTPVKLGDKE 82

[Close]

BLAST of Cla97C01G006550 vs. NCBI nr
Match: XP_008467132.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis melo] >KAA0046322.1 10 kDa chaperonin-like [Cucumis melo var. makuwa] >TYK30486.1 10 kDa chaperonin-like [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. NCBI nr
Match: XP_004150598.1 (10 kDa chaperonin, mitochondrial [Cucumis sativus] >KAE8648605.1 hypothetical protein Csa_007995 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD SGNLVPVCV
Sbjct: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. NCBI nr
Match: KAF3432182.1 (hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis])

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-32
Identity = 73/82 (89.02%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIP+ NRVL+EKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGN+VPVCV
Sbjct: 1  MARRLIPTLNRVLVEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNVVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. NCBI nr
Match: XP_022152333.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-32
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP  NRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGNLVPV V
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLVPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLP+YGGTPVKLGEKE
Sbjct: 61 KEGDTVLLPDYGGTPVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGE E
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.8e-29
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot
Match: P38910 (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HSP10 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.4e-14
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 2  AKRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCV 61
          AK ++P  +RVL+++I   +KT++G+ LPE +  KLN  +VVAVGPG  D +GN V   V
Sbjct: 8  AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62 KEGDTVLLPEYGGTPVKLGEKE 83
          K GD VL+P++GG+ +KLG  +
Sbjct: 68 KVGDQVLIPQFGGSTIKLGNDD 89

[Close]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 2  AKRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCV 61
          AK ++P  +R+L+++I   +KT++GI LPE S  KL+ G+V++VG G  +  G L    V
Sbjct: 8  AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62 KEGDTVLLPEYGGTPVKLGEKE 83
            GD VLLP YGG+ +K+GE+E
Sbjct: 68 AVGDRVLLPAYGGSNIKVGEEE 89

[Close]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 3  KRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVK 62
          ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G +  SG + PV VK
Sbjct: 7  RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63 EGDTVLLPEYGGTPVKLGEKE 83
           GD VLLPEYGGT V L +K+
Sbjct: 67 VGDKVLLPEYGGTKVVLDDKD 87

[Close]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL
Match: A0A0A0KPH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570400 PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 92/142 (64.79%), Postives = 99/142 (69.72%), Query Frame = 0


Query: 1   MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
           MA+RLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD SGNLVPVCV
Sbjct: 1   MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61  KEGDTVLLPEYGGTPVKLGEKETRRRFEIMILEIAVSSQN-------------------- 117
           KEGDTVLLPEYGGT VKLGEKE    F  + +E  V   N                    
Sbjct: 61  KEGDTVLLPEYGGTSVKLGEKEYASTFLALFVETMVFDSNFPALFIPTISILLEIAVYLC 120

[Close]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL
Match: A0A5D3E3M3 (10 kDa chaperonin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00290 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL
Match: A0A1S3CU36 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103504560 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.0e-33
Identity = 75/82 (91.46%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL
Match: A0A6J1JRD8 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487657 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP FNRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGNL+PV V
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL
Match: A0A6J1DEL3 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111020078 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP  NRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGARD SGNLVPV V
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLVPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLP+YGGTPVKLGEKE
Sbjct: 61 KEGDTVLLPDYGGTPVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32
Identity = 65/82 (79.27%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP+ NRVL+EKILPPSKT +GILLPE S++LNSG+V+AVGPGARD +GNL+PV V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGD VLLPE+GGT VKLGEKE
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKE 82

[Close]

BLAST of Cla97C01G006550 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 )

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-30
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKE 83
          KEGDTVLLPEYGGT VKLGE E
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENE 82

[Close]

BLAST of Cla97C01G006550 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 3   KRLIPSFNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVK 62
           K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTPVK 78
            G TVL  +Y G   K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]

BLAST of Cla97C01G006550 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 3   KRLIPSFNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVK 62
           K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTPVK 78
            G TVL  +Y G   K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]

BLAST of Cla97C01G006550 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 3   KRLIPSFNRVLIEKILPPSKTSAGILLPESS-TKLNSGKVVAVGPGARDNSGNLVPVCVK 62
           K L P  +RV I+      KT+ G+LL E++  K + G V+AVGPG+ D  G + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTPVK 78
            G TVL  +Y G   K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

The following BLAST results are available for this feature:

BLAST of Cla97C01G006550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907054.1	3.1e-35	95.12	10 kDa chaperonin, mitochondrial-like [Benincasa hispida]	[more]
XP_008467132.1	1.5e-32	91.46	PREDICTED: 10 kDa chaperonin-like [Cucumis melo] >KAA0046322.1 10 kDa chaperonin...	[more]
XP_004150598.1	1.5e-32	91.46	10 kDa chaperonin, mitochondrial [Cucumis sativus] >KAE8648605.1 hypothetical pr...	[more]
KAF3432182.1	1.9e-32	89.02	hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis]	[more]
XP_022152333.1	3.2e-32	91.46	10 kDa chaperonin, mitochondrial-like [Momordica charantia]	[more]

BLAST of Cla97C01G006550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34893	4.6e-29	71.95	10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S...	[more]
Q96539	7.8e-29	71.95	10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1	[more]
P38910	5.4e-14	47.56	10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
O59804	2.7e-13	45.12	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q64433	3.5e-13	49.38	10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ...	[more]

BLAST of Cla97C01G006550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPH4	1.6e-37	64.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570400 PE=3 SV=1	[more]
A0A5D3E3M3	7.0e-33	91.46	10 kDa chaperonin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3CU36	7.0e-33	91.46	10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103504560 PE=3 SV=1	[more]
A0A6J1JRD8	1.6e-32	91.46	10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC11148765...	[more]
A0A6J1DEL3	1.6e-32	91.46	10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]

BLAST of Cla97C01G006550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23100.1	3.5e-32	79.27	GroES-like family protein	[more]
AT1G14980.1	3.2e-30	71.95	chaperonin 10	[more]
AT5G20720.1	2.3e-07	40.79	chaperonin 20	[more]
AT5G20720.2	2.3e-07	40.79	chaperonin 20	[more]
AT5G20720.3	2.3e-07	40.79	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 61..73 score: 52.0 coord: 26..47 score: 40.29 coord: 5..20 score: 26.5
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..97 e-value: 3.8E-21 score: 86.3
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 6..82 e-value: 1.6E-18 score: 66.5
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..86
IPR020818	GroES chaperonin family	CDD	cd00320	cpn10	coord: 4..82 e-value: 6.85125E-30 score: 102.585
IPR037124	GroES chaperonin superfamily	GENE3D	2.30.33.40	GroES chaperonin	coord: 1..100 e-value: 8.4E-24 score: 85.6
None	No IPR available	PANTHER	PTHR10772:SF37	GROES-LIKE FAMILY PROTEIN	coord: 1..86
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 4..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G006550.2	Cla97C01G006550.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity