Cla97C01G000160 (gene) Watermelon (97103) v2.5

Overview


Name	Cla97C01G000160
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
Description	Unknown protein
Location	Cla97Chr01: 102525 .. 102734 (+)
RNA-Seq Expression	Cla97C01G000160
Synteny	Cla97C01G000160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA

mRNA sequence

ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA

Coding sequence (CDS)

ATGGTGGTGAAAATGAGGGAAATGAATGTGGAAATGGAAATTCAGATGCATGAGGTGGTGATGATGCTTATCGCCGCCGCCGCCGAACCCCATCGGAAGAATGTGAAGGTAGGGTTAAAGAGAAAAGGGCCAAGGGTGGGAAGAGGAGATTGCGAGGGTGAAGAGAGTGAAAGAGGAATGCGTGAAGGAGGAAGGGATATTACTCATTGA

Protein sequence

MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGMREGGRDITH

Homology

[Close]

BLAST of Cla97C01G000160 vs. NCBI nr
Match: KGN49831.1 (hypothetical protein Csa_000699 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 1  MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGM 60
          MVVKMREMNVEMEI+M EV+MM++  A E HRK VKV LKRKGPR+ RGD EGEESERGM
Sbjct: 32 MVVKMREMNVEMEIEMQEVLMMML-VATETHRKKVKV-LKRKGPRMVRGDSEGEESERGM 91

Query: 61 REGGRDITH 70
           EGGRDI H
Sbjct: 92 SEGGRDIGH 98

[Close]

BLAST of Cla97C01G000160 vs. ExPASy TrEMBL
Match: A0A0A0KQ31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139105 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 1  MVVKMREMNVEMEIQMHEVVMMLIAAAAEPHRKNVKVGLKRKGPRVGRGDCEGEESERGM 60
          MVVKMREMNVEMEI+M EV+MM++  A E HRK VKV LKRKGPR+ RGD EGEESERGM
Sbjct: 32 MVVKMREMNVEMEIEMQEVLMMML-VATETHRKKVKV-LKRKGPRMVRGDSEGEESERGM 91

Query: 61 REGGRDITH 70
           EGGRDI H
Sbjct: 92 SEGGRDIGH 98

The following BLAST results are available for this feature:

BLAST of Cla97C01G000160 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49831.1	3.6e-15	76.81	hypothetical protein Csa_000699 [Cucumis sativus]	[more]

BLAST of Cla97C01G000160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cla97C01G000160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ31	1.7e-15	76.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139105 PE=4 SV=1	[more]

BLAST of Cla97C01G000160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G000160.1	Cla97C01G000160.1	mRNA