ClCG11G013720 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G013720
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr11: 26889738 .. 26890013 (+)
RNA-Seq ExpressionClCG11G013720
SyntenyClCG11G013720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTCGAGTTAAAAAAGATGTCAACTTAAGAAAGAAGGTCAAGCGAAGCAAGGAGATCGATCTAAGAAAGCCTATCAACTTGGCAGGTCAAGTTAAGAAAGAAGGTCTACCTAAAAAAAGAGGTCAAGCTAAGCAAGAAGATCAACATGAGAAAGTAGGTCGACTTGAGAAAGGAGGTCAAGCTAATGACAGAGGTCGACCTGAGAAAGGAGGTCAAGCTAAGCAAGGGGACCAATATGAGAAAGCAGGTCAACTTGGTAGATCGAGCTAA

mRNA sequence

ATGGCAAGTCGAGTTAAAAAAGATGTCAACTTAAGAAAGAAGGTCAAGCGAAGCAAGGAGATCGATCTAAGAAAGCCTATCAACTTGGCAGGTCAAGTTAAGAAAGAAGGTCTACCTAAAAAAAGAGGTCAAGCTAAGCAAGAAGATCAACATGAGAAAGTAGGTCGACTTGAGAAAGGAGGTCAAGCTAATGACAGAGGTCGACCTGAGAAAGGAGGTCAAGCTAAGCAAGGGGACCAATATGAGAAAGCAGGTCAACTTGGTAGATCGAGCTAA

Coding sequence (CDS)

ATGGCAAGTCGAGTTAAAAAAGATGTCAACTTAAGAAAGAAGGTCAAGCGAAGCAAGGAGATCGATCTAAGAAAGCCTATCAACTTGGCAGGTCAAGTTAAGAAAGAAGGTCTACCTAAAAAAAGAGGTCAAGCTAAGCAAGAAGATCAACATGAGAAAGTAGGTCGACTTGAGAAAGGAGGTCAAGCTAATGACAGAGGTCGACCTGAGAAAGGAGGTCAAGCTAAGCAAGGGGACCAATATGAGAAAGCAGGTCAACTTGGTAGATCGAGCTAA

Protein sequence

MASRVKKDVNLRKKVKRSKEIDLRKPINLAGQVKKEGLPKKRGQAKQEDQHEKVGRLEKGGQANDRGRPEKGGQAKQGDQYEKAGQLGRSS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G013720.1ClCG11G013720.1mRNA