ClCG11G009270 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G009270
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein TIC 214
Location	CG_Chr11: 15049148 .. 15051171 (-)
RNA-Seq Expression	ClCG11G009270
Synteny	ClCG11G009270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATAATCAATTCGGTCATTGTGGTCAGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTTGGGTTATGGAAGAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTTATTAGATCTAATAAGTACCTTGTATCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTCTGTGTCTACTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTTAGAAACGGAGGAAAGGGCGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCTGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGACGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCAGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGAAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGAAACTTCTTACCCTCCGGATGGAAATAAAGAAAATTCGAAGTTAGAAATAGATAAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTGGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGAGAAATTTGAAAATGCTGTTAGAAATGAAATGTCGCAATATTTTTTTTATACATGTCAAAGTGACGGAAAAGACAGAATAGTTTTTACACGTCCACCTAGTGTAGCAACTTTTTTTGAAATGATACAAAAAAAGATATCTTTGTTCACAATAGAAAAACTTTATTATGATGAATTCAATAATCCTTGGAATTATCTCAATGAACAAACAAAAAAAGAAATTTAA

mRNA sequence

ATGAAGATAATCAATTCGGTCATTGTGGTCAGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTTGGTATTCTCTTATTCTGTGTCTACTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTTAGAAACGGAGGAAAGGGCGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCTGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGACGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCAGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGAAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAATAAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTGGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGAGAAATTTGAAAATGCTGTTAGAAATGAAATGTCGCAATATTTTTTTTATACATGTCAAAGTGACGGAAAAGACAGAATAGTTTTTACACGTCCACCTAGTGTAGCAACTTTTTTTGAAATGATACAAAAAAAGATATCTTTGTTCACAATAGAAAAACTTTATTATGATGAATTCAATAATCCTTGGAATTATCTCAATGAACAAACAAAAAAAGAAATTTAA

Coding sequence (CDS)

ATGAAGATAATCAATTCGGTCATTGTGGTCAGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTTGGTATTCTCTTATTCTGTGTCTACTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTTAGAAACGGAGGAAAGGGCGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCTGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGACGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCAGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGAAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAATATAAAAAGACCAATAAAAAAAGAAAAATCTCTCTTCTGGTTTGAAAAACCTCTTGTGACTATTCTTTTGGACTATAAACGATGGAATCGTCCATTTCGATATATAAAAAATGAGAAATTTGAAAATGCTGTTAGAAATGAAATGTCGCAATATTTTTTTTATACATGTCAAAGTGACGGAAAAGACAGAATAGTTTTTACACGTCCACCTAGTGTAGCAACTTTTTTTGAAATGATACAAAAAAAGATATCTTTGTTCACAATAGAAAAACTTTATTATGATGAATTCAATAATCCTTGGAATTATCTCAATGAACAAACAAAAAAAGAAATTTAA

Protein sequence

MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAESEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTKDEFHFKRTRYQNIKRPIKKEKSLFWFEKPLVTILLDYKRWNRPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIEKLYYDEFNNPWNYLNEQTKKEI

Homology

[Close]

BLAST of ClCG11G009270 vs. NCBI nr
Match: QZL38742.1 (Ycf1 protein [Citrullus ecirrhosus])

HSP 1 Score: 58.9 bits (141), Expect = 7.0e-05
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

[Close]

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot
Match: Q14FA0 (Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.3e-74
Identity = 169/265 (63.77%), Postives = 187/265 (70.57%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    L  +   YS     LGRIPSPI TKKLKET ETEER  
Sbjct: 210 NKYLVSELRNSMARIFSI----LLFITCVYS-----LGRIPSPIFTKKLKETSETEER-- 269

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
            EEETDVEIETT ETKGTKQEQEG T+ED S SLFSEEKE+PDKIDETEEIRVNGK+KTK
Sbjct: 270 -EEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIRVNGKEKTK 329

Query: 125 DE--FHFKRTRYQNIKRPI--------------------KKEKSLFWFEKPLVTILLDYK 184
           DE  FHFK T Y+N  RP+                    KK+K L WFEKP VTIL DYK
Sbjct: 330 DEFHFHFKETCYKN--RPVYETFYLDGNQENSKLEIFLDKKDKDLVWFEKPRVTILFDYK 389

Query: 185 RWNRPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLF 244
           RWNRPFRYIKN++F+NAVR EMSQYFF TC+SDGK+RI FT PPS++TF EMIQ+K+SLF
Sbjct: 390 RWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPSLSTFLEMIQRKMSLF 449

Query: 245 TIEKLYYDEFNNPWNYLNEQTKKEI 248
           T EKL  DE  N WNY NEQ KK +
Sbjct: 450 TTEKLSSDELYNHWNYNNEQKKKNL 460

[Close]

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot
Match: A4GYX4 (Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.3e-74
Identity = 169/265 (63.77%), Postives = 187/265 (70.57%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    L  +   YS     LGRIPSPI TKKLKET ETEER  
Sbjct: 210 NKYLVSELRNSMARIFSI----LLFITCVYS-----LGRIPSPIFTKKLKETSETEER-- 269

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
            EEETDVEIETT ETKGTKQEQEG T+ED S SLFSEEKE+PDKIDETEEIRVNGK+KTK
Sbjct: 270 -EEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPDKIDETEEIRVNGKEKTK 329

Query: 125 DE--FHFKRTRYQNIKRPI--------------------KKEKSLFWFEKPLVTILLDYK 184
           DE  FHFK T Y+N  RP+                    KK+K L WFEKP VTIL DYK
Sbjct: 330 DEFHFHFKETCYKN--RPVYETFYLDGNQENSKLEIFLDKKDKDLVWFEKPRVTILFDYK 389

Query: 185 RWNRPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLF 244
           RWNRPFRYIKN++F+NAVR EMSQYFF TC+SDGK+RI FT PPS++TF EMIQ+K+SLF
Sbjct: 390 RWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPSLSTFLEMIQRKMSLF 449

Query: 245 TIEKLYYDEFNNPWNYLNEQTKKEI 248
           T EKL  DE  N WNY NEQ KK +
Sbjct: 450 TTEKLSSDELYNHWNYNNEQKKKNL 460

[Close]

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 272.3 bits (695), Expect = 5.3e-72
Identity = 158/241 (65.56%), Postives = 174/241 (72.20%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPI  K+  +T ET E  E
Sbjct: 207 NKYLVSELRNSIAPIFSI---ILFITWVYY------LGRIPSPIPLKETSKTSETAETEE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEG T+EDTSPSLFSEEKEDPDKIDETEEIR++      
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFSEEKEDPDKIDETEEIRID------ 326

Query: 125 DEFHFKRTRYQNIKRPIKKEKSLFWFEKPLVTILLDYKRWNRPFRYIKNEKFENAVRNEM 184
                            KKEK LF FEKPL  IL DYKRWNRPFRYIKN+KF+NAVR EM
Sbjct: 327 -----------------KKEKYLFGFEKPLGIILFDYKRWNRPFRYIKNDKFDNAVRKEM 386

Query: 185 SQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIEKLYYDEFNNPWNYLNEQTK 244
           SQYFFYTCQSDGKDRIVFT PPSVATFFE+I+KKISLF+ EKL+YDEF+NPW  LNEQ K
Sbjct: 387 SQYFFYTCQSDGKDRIVFTYPPSVATFFELIEKKISLFSTEKLFYDEFDNPWKSLNEQKK 415

Query: 245 K 246
           +
Sbjct: 447 R 415

HSP 2 Score: 63.2 bits (152), Expect = 4.9e-09
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRAW 34
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRAW
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRAW 48

[Close]

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.6e-71
Identity = 160/259 (61.78%), Postives = 183/259 (70.66%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGR+P+PIVTKKLKET +TEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRMPAPIVTKKLKETSKTEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEE DVEIETTSETKGTKQEQE  T+ED SPSL SEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEERDVEIETTSETKGTKQEQERSTEEDPSPSLCSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEF-------------HFKRTRYQNIKRPI---KKEKSLFWFEKPLVTILLDYKRWNRPF 184
           DEF             ++     +N K  I   K++K LFWFEKPLVT+L DYKRWNRP 
Sbjct: 327 DEFKETCYKSRPVYENYYLNGNQENSKLEILKDKEDKDLFWFEKPLVTLLFDYKRWNRPL 386

Query: 185 RYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIEKLY 244
           RYIKN++FENAVRNEMSQY FYTC++DGK RI FT PPS++TF EMIQ+KI L T EKL 
Sbjct: 387 RYIKNDRFENAVRNEMSQYLFYTCKNDGKQRISFTYPPSLSTFLEMIQRKIYLCTKEKLS 446

Query: 245 YDEFNNPWNYLNEQTKKEI 248
            +E  N W Y NEQ K  +
Sbjct: 447 SEEMYNHWIYTNEQKKNNL 456

HSP 2 Score: 58.9 bits (141), Expect = 9.2e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

[Close]

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot
Match: Q0ZIW0 (Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-70
Identity = 163/263 (61.98%), Postives = 182/263 (69.20%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPI+TKK+KET ETEER E
Sbjct: 210 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPILTKKMKETSETEERGE 269

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIE TSETKGTKQEQE  T+ED SPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 270 SEEETDVEIERTSETKGTKQEQERSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 329

Query: 125 DEFHFKRTRY---------------QNIKRPIKKE----KSLFWFEKPLVTILLDYKRWN 184
           DEFHFK T Y               +N K  I KE    K+  WFEKPLVT+L DYKRWN
Sbjct: 330 DEFHFKETCYKNSPVYETSYLDGNQENSKLEILKEDEDNKNKKWFEKPLVTLLFDYKRWN 389

Query: 185 RPFRYIKNE-KFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTI 244
           RP RYIK   + + AVRNEMSQYFFYTC SDGK RI FT PPS++ F EMIQ+K+SL T 
Sbjct: 390 RPLRYIKARFQIKKAVRNEMSQYFFYTCLSDGKQRISFTYPPSLSIFLEMIQRKMSLSTT 449

Query: 245 EKLYYDEFNNPWNYLNEQTKKEI 248
           E+L YDE  N W Y NEQ +  +
Sbjct: 450 ERLSYDELYNHWIYTNEQKENTL 463

HSP 2 Score: 58.9 bits (141), Expect = 9.2e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

[Close]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL
Match: A0A249RXF8 (Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 203/262 (77.48%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPIVTKKLKET ETEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPIVTKKLKETSETEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEGFT+EDTSPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEFHFKRTRYQNIKRPI-------------------KKEKSLFWFEKPLVTILLDYKRWN 184
           DEFHFKRTRYQNIKRP+                   KKEKSLFWFEKPLVTIL DYKRWN
Sbjct: 327 DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWN 386

Query: 185 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIE 244
           RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFT PPSVATFFEMIQKKISLFT E
Sbjct: 387 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTHPPSVATFFEMIQKKISLFTRE 446

Query: 245 KLYYDEFNNPWNYLNEQTKKEI 248
           KLYYDEF+NPWNYLNEQ K+ +
Sbjct: 447 KLYYDEFDNPWNYLNEQKKRNL 459

[Close]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL
Match: A0A249RXF8 (Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-05
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

HSP 2 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 203/262 (77.48%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPIVTKKLKET ETEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPIVTKKLKETSETEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEGFT+EDTSPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEFHFKRTRYQNIKRPI-------------------KKEKSLFWFEKPLVTILLDYKRWN 184
           DEFHFKRTRYQNIKRP+                   KKEKSLFWFEKPLVTIL DYKRWN
Sbjct: 327 DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWN 386

Query: 185 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIE 244
           RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFT PPSVATFFEMIQKKISLFT E
Sbjct: 387 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTHPPSVATFFEMIQKKISLFTRE 446

Query: 245 KLYYDEFNNPWNYLNEQTKKEI 248
           KLYYDEF+NPWNYLNEQ K+ +
Sbjct: 447 KLYYDEFDNPWNYLNEQKKRNL 459

[Close]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL
Match: A0A249RX64 (Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-05
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

HSP 2 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 203/262 (77.48%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPIVTKKLKET ETEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPIVTKKLKETSETEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEGFT+EDTSPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEFHFKRTRYQNIKRPI-------------------KKEKSLFWFEKPLVTILLDYKRWN 184
           DEFHFKRTRYQNIKRP+                   KKEKSLFWFEKPLVTIL DYKRWN
Sbjct: 327 DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWN 386

Query: 185 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIE 244
           RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFT PPSVATFFEMIQKKISLFT E
Sbjct: 387 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTHPPSVATFFEMIQKKISLFTRE 446

Query: 245 KLYYDEFNNPWNYLNEQTKKEI 248
           KLYYDEF+NPWNYLNEQ K+ +
Sbjct: 447 KLYYDEFDNPWNYLNEQKKRNL 459

[Close]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL
Match: A0A1P8LDD3 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-05
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

HSP 2 Score: 368.2 bits (944), Expect = 2.6e-98
Identity = 203/262 (77.48%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPIVTKKLKET ETEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPIVTKKLKETSETEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEGFT+EDTSPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEFHFKRTRYQNIKRPI-------------------KKEKSLFWFEKPLVTILLDYKRWN 184
           DEFHFKRTRYQNIKRP+                   KKEKSLFWFEKPLVTIL DYKRWN
Sbjct: 327 DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWN 386

Query: 185 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIE 244
           RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFT PPSVATFFEMIQKKISLFT E
Sbjct: 387 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTHPPSVATFFEMIQKKISLFTRE 446

Query: 245 KLYYDEFNNPWNYLNEQTKKEI 248
           KLYYDEF+NPWNYLNEQ K+ +
Sbjct: 447 KLYYDEFDNPWNYLNEQKKRNL 459

[Close]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL
Match: A0A1P8LDM6 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.4e-05
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

HSP 2 Score: 367.1 bits (941), Expect = 5.8e-98
Identity = 202/262 (77.10%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 5   NSVIVVRLYYGFLTTFSIGPSYLFLLRAWYSLILCLLGRIPSPIVTKKLKETLETEERAE 64
           N  +V  L       FSI    LF+   +Y      LGRIPSPIVTKKLKET ETEER E
Sbjct: 207 NKYLVSELRNSMARIFSI---LLFITCVYY------LGRIPSPIVTKKLKETSETEERGE 266

Query: 65  SEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFSEEKEDPDKIDETEEIRVNGKKKTK 124
           SEEETDVEIETTSETKGTKQEQEGFT+EDTSPSLFSEEKEDPDKIDETEEIRVNGK+KTK
Sbjct: 267 SEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPDKIDETEEIRVNGKEKTK 326

Query: 125 DEFHFKRTRYQNIKRPI-------------------KKEKSLFWFEKPLVTILLDYKRWN 184
           DEFHFKRTRYQNIKRP+                   KKEKSLFWFEKPLVTIL DYKRWN
Sbjct: 327 DEFHFKRTRYQNIKRPVYETSYPPDGNKENSKLEIDKKEKSLFWFEKPLVTILFDYKRWN 386

Query: 185 RPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVFTRPPSVATFFEMIQKKISLFTIE 244
           RPFRYIKN+KFENAVRNEMSQYFFYTCQSDGKDRIVFT PPSVATFFEMIQKKISLFT E
Sbjct: 387 RPFRYIKNDKFENAVRNEMSQYFFYTCQSDGKDRIVFTHPPSVATFFEMIQKKISLFTRE 446

Query: 245 KLYYDEFNNPWNYLNEQTKKEI 248
           KLYYDEF+NPWNYLNEQ K+ +
Sbjct: 447 KLYYDEFDNPWNYLNEQKKRNL 459

[Close]

BLAST of ClCG11G009270 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-52
Identity = 119/225 (52.89%), Postives = 143/225 (63.56%), Query Frame = 0


Query: 41  LGRIPSPIVTKKLKETLETEERAESEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFS 100
           LGRIPSPI TKKLK                     TSET GTKQ+QE  T+E   PSLFS
Sbjct: 240 LGRIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFS 299

Query: 101 EEKEDPDKIDETEEIRVNGKKKTK--DEFHFKR-TRYQNIKRPI---------------K 160
           EE ED DKIDE EEIRVNGK K    DEFH +    Y+ +   +               K
Sbjct: 300 EEGEDLDKIDEMEEIRVNGKDKINKDDEFHVRTYYNYKTVSENLYGNKENSNLEFFKIKK 359

Query: 161 KEKSLFWFEKPLVTILLDYKRWNRPFRYIKNEKFENAVRNEMSQYFFYTCQSDGKDRIVF 220
           KE    WFEKP VT++ DYKRWNRP RYIKN+K EN VRNEMSQYFFYTCQSDGK+RI F
Sbjct: 360 KEDHFLWFEKPFVTLVFDYKRWNRPNRYIKNDKIENIVRNEMSQYFFYTCQSDGKERISF 419

Query: 221 TRPPSVATFFEMIQKKISLFTIEKLYYDEFNNPWNYLNEQTKKEI 248
           T PP+++TFFEMIQK+I  FT EK  +D+ +  W+ ++E+ ++ +
Sbjct: 420 TYPPNLSTFFEMIQKRIPSFTKEKKTFDQVSTYWSLIHEEKRENL 444

[Close]

BLAST of ClCG11G009270 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-12
Identity = 55/100 (55.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 41  LGRIPSPIVTKKLKETLETEERAESEEETDVEIETTSETKGTKQEQEGFTDEDTSPSLFS 100
           LGRIPSPI TKKLK                     TSET GTKQ+QE  T+E   PSLFS
Sbjct: 240 LGRIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFS 299

Query: 101 EEKEDPDKIDETEEIRVNGKKKTK--DEFHFKRTRYQNIK 139
           EE ED DKIDE EEIRVNGK K    DEFH +   Y N K
Sbjct: 300 EEGEDLDKIDEMEEIRVNGKDKINKDDEFHVR--TYYNYK 317

[Close]

BLAST of ClCG11G009270 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 58.9 bits (141), Expect = 6.6e-09
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGPSYLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPSYLFLLRA 47

[Close]

BLAST of ClCG11G009270 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0


Query: 1  MKIINSVIVVRLYYGFLTTFSIGPSYLFLLRA 33
          MKIINSV+VV LYYGFLTTFSIGP YLFLLRA
Sbjct: 16 MKIINSVVVVGLYYGFLTTFSIGPFYLFLLRA 47

The following BLAST results are available for this feature:

BLAST of ClCG11G009270 vs. NCBI nr


Match Name	E-value	Identity	Description
QZL38742.1	7.0e-05	93.75	Ycf1 protein [Citrullus ecirrhosus]	[more]

Pages

BLAST of ClCG11G009270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14FA0	4.3e-74	63.77	Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1	[more]
A4GYX4	4.3e-74	63.77	Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1	[more]
Q4VZL0	5.3e-72	65.56	Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2	[more]
A6MM95	2.6e-71	61.78	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
Q0ZIW0	1.0e-70	61.98	Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1	[more]

BLAST of ClCG11G009270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RXF8	2.6e-98	77.48	Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1	[more]
A0A249RXF8	3.4e-05	93.75	Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1	[more]
A0A249RX64	3.4e-05	93.75	Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1	[more]
A0A1P8LDD3	3.4e-05	93.75	Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1	[more]
A0A1P8LDM6	3.4e-05	93.75	Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1	[more]

Pages

BLAST of ClCG11G009270 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	4.8e-52	52.89	Ycf1 protein	[more]
ATCG01000.1	1.3e-12	55.00	Ycf1 protein	[more]
ATMG00370.1	6.6e-09	93.75	Ycf1 protein	[more]
AT2G07739.1	3.3e-08	90.63	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 6..32 e-value: 4.3E-10 score: 38.2 coord: 39..246 e-value: 3.0E-85 score: 286.9
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 41..246
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..112
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 1..33 coord: 41..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G009270.1	ClCG11G009270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane