ClCG11G008900 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATTGTTTGGCTTTCAATCGTCAATAATATATCGCCTTATTATTCTCTCTTTTTTCCTTCCTTTTTCCTATCTCTTTTGTTTCTCCCGATTCCCGTGGATTGGATCATCGTCTCCGACGTTTCCGATATGGATCTCTTTGCTACCAATGTCAAGAACACCGCCGCCCCTTCCCCTTTCTCACTCAAACACTCCTTTCCTGATAGACCCATTTCTTGCACTCTGGCGAAGACTTCGAGGAGATTCTCTTCTTCACATCCCTGTGGCGCTGAACTTCTACGCCTACTTGAGATCCGTGTTTTCAGACCCAACCTTTGCTCTCCCGCTTTTCTGGTCAGAGCGACTGCGAAGAAGAATCACGACAGTTCTCCATCTCCTGGTACTTACTAATTTCTTCACTTCTTGGGGTTTCATCGTCCCCAATTTCCTTCTCTTCTTCTTTCTTTAGCCTTCTTTCCACTTACTTACGTGTTCTTGGCGTAATGATTGCTCGGAATTATGATATAGTACTCATCCATGTGAGCTCGTAACCTAAAATTAACGTCGTATGTTTTAGTTTCTTAGCTACCAAATAAGCCTCTTGGTTCTGTATGGTACTCCGGACTTTCTTCTGTTCTTGGGAGTCTTTTCCTCTTTCTTTGTGACTTGCTTCTGTATACTGGCTATCACAGTCCGGAGTCTTTATTATTACCATTATCATCTATTCTTTATATGCTGTGTTGTTTAAATTATCCATTTCCTGAATTGTCATGCTTTTTTTCTCTTTAAAGTTTTAAACTGATATTCATTCATGTAATTAAAGAGTTGAGATACGATCCTTACTGGAAAATATTTAAGCACGATCAACTAAATGGTAAAAACTCGTTTGAAGTAAGGTATAATGGGGTTATGCTATGCACATTAGTTATAGGAAGTACGCTGAAGGTTAATATATAAGTCAGACAAGCTCAAACTCAATCAATGCTTGTCTAAGACATAAGGGAGTGCAACACACCGTCCTCAAGGCTGCAGGTGTGGGCATCACAAAGATTGTATTGAGTCTCGTACATATATTACGGTGAGGAACCTTTATATTTTCAAAGATGTGTCAATTTGTTATGGGTGTTTAGTTGTGAAACCTTGCGTATGTGCATTTAAATGTGCAAATGAAATCATTGGATTGTAACCACTGAGAATAATAGCAATCAAACGATTATGATAATCGATATGGAAAAATATGCCCATCTACAAACAACCATCCACAGTCTGTAAATAGGTCTTTCCACACTCGAGTTTTGCATCGCAAAACTCATTCCTGAAAGTTCCATCTTCTTTCTGGATCTTGTTGCTGGATCATTTTTGTTAGAAATTCTTGCAAAGAGTCTTAAGCACATTTGATTTTCCAATAAGATTAGTATAACGCTGCTTCAATTTTTGAAGAAGTGTTGTATTTTGAGAGGAAGATGCTCTAATCACCATAGCAGTTAAGATGAAAATTCTGTGTTTTGGAATTTTTCTTTGCATATACCTCACTTCTCTTACAATCTCTCTGTTATTTATTGTTCTTTTGTTGTATTATTTTACTTTTTCCAACATATATCCCTGTCATAGTTCTGCTTAAAAATCTGGCGAGATATGTAAATGCAAGAATTTTATGTAAATGGGAAAAATTAATGCAAAGAATTCTAAGGAGAATAGGATTCTCTAGATATGTAGTTGGTACTCGTAATTGTGATATTTGTTTAGGATGGATGCTTGGAAGGAAGAACTGCCAATAGTGCGGCAGTGGTAATTTTCCCTGTCTTGTTGATGGTAGGAATGAAATGATCAAGGAGGTCCAATACTTGAATAGAGCTACTTGGATCTTTATTTTCAGGAGGTTTTGAAATTTGAATGATTGACGAAAGGGTGGAAAACTAGTCTCAACCTAATATTGGTAACCTTACTTAGACCTCTGCTTTGCTAGACAATTGCATATGGAAGTTGGATGTTTGGGGTCTTTTTTCATTCCTTTTTATTTTTAAATCTATAAATGGAATTTGGGCTCATGGCTCACTGGTGTGTTCATCATCTTTTCCGCTTACGATTTCGAGTTCCAGTCACATTGTACAAAATGCAAAACCTAAAAAGTACTCCTTATAGATGGTTAGTCTTAGGTATCCATTTTTATTCTTCCATTGCTGTCAATGCCATTTCATTTATTATGTTTTTATCCTCTGTGGCTCTGTACATGTCGAGGAAATTCTTCTTCTTTCTTCTTTATTTGTTTTTCCGTACTACATGTGATTTGTCTGCCTTCAGCCTTAAGCTAACAATTTTCGAGGATTAGTGCCTTGGTCTTCAACAATTGCTCTGGAAATTAAGGAATTGTAGAAACATTACAAGCCCTGAATACTTTAACTGACCAGCTGAAAAGTAATAAAAAGGAGAAAAATATATTTTTCACCTCCCTTTCTAGTTGGAAGAGATACTTCTGACAGTGATAAGCACGCTGCTTATGTGGTATTACTGGTGACATTAACTTGATCCCAGAGTTTAACGTTTAGGTTCCTACCTCAGTGGTGCCTATCTTAGTCGATGCTACTTTAGTATTATGATGGAGATAGCTATAGATTCATGGGGGTTGTCTAGAAAAGGGAACGTTTCATAGCCAAAAAAGTGTCTTCTCCACTTTGTGGAAGTTAGCTGCTGCCAAACCCTTGGCGAGGCTCTGGATCTTTAAATTAAAGTGAACTGTTGCACGATCCAGGGAGACCATAGGCAGATAACTACTTTTTATGCCCTTCGATAATTGATAATATGTCTCCAAGTACTATGTTTACCAGAAATATCATTTTTTTTTGTTTTGTTTTCTTAAGTGCAGAAAATGGAGATCATTCAATTCCTGGAGATGATGCTAAATCAAAGAATATTTCTGATGGTAACAAAAGTAATGAAACTTCTTCCCAGAAATCGCAGCACATAAATTTGGACTGGCGAGAATTCAGAGCAAACCTATTTGCTCGTGAGCAGGTGATTCCTCATTATTTTACTGAATTCTACATTCTCTTTTTGAATTCAAAATTGATGATACTCCAAACTAGGAAATAGGCTTAAATGGTAATTATGAGATACCATGTCATGTCTCTAAGTTTACTCAGGCTAGAAATTAAATTCTCTCATAGATGGCTAACATCGTATTGCAAAGTTCTGTCAAAGAGGTCAGAGAAAAATCGATCAGCTATCTCTTCTGTCAAAGAGGTCTGGGAGCAAAAACGATCAGCTATCAATTTTATGTGGTGTAATTTTTTTGCAGGCAGAAAAGGATGAAGCTGATGTGGATGTCCAGAGTGCAAATGCTCACGAGTCTAAGTCTCTCGGGCTGAAGTGGGCGCATCCTATTCCTATGCCGGAGACTGGCTGTGTCCTTGTTGCCACCGAGAAGTTGGATGGTGTTCGCACTTTTGAGCGAACAGTCGTCCTTCTCCTCAGATCTGGAAGCAGACATCCTCATGAGGGACCGTTCGGTGTCGTGATAAATCGCCCACTCCACAAAAAGATCAAGCATATGAAACCAACCAATATTGACTTAGCAACTACATTTTCTGATTGCTCTCTACATTTCGGGGGGCCTCTTGAGGCAAGCATGTTTTTGCTGAAGACAGGAGAAAAATCGAAACTCCATGGCTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGTGCTCGAAACACCCTGGACGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGTTGGCAACTGGATCAATTGAGGGAGGAGATTGAATCAAATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATTGGTGGAGGCACATCAGATTCCTCATCAGAGGGACTGTGGGAGGAAATTTTGCAGTTAATGGGCGGTCCCTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAGTTTACTTATTTGAAGGAACATTGAAAATATCTGGAGTTAAAATGTGTATTCTAGTTAAAGCCATAAAAAGCTGAAAGCCAAATGTACAGAAGTTAGCTGGCTTTTGAAATTTAGCGGACCTCATCTCTTTCTTTAAGGACAACAACGCCCTTTTATAGCTATTTCTAAATGTAGTTTATGTATATTCTGTTCACATTTGTTTGATTCAATATCTTTAGAAATCTGC CTCATTGTTTGGCTTTCAATCGTCAATAATATATCGCCTTATTATTCTCTCTTTTTTCCTTCCTTTTTCCTATCTCTTTTGTTTCTCCCGATTCCCGTGGATTGGATCATCGTCTCCGACGTTTCCGATATGGATCTCTTTGCTACCAATGTCAAGAACACCGCCGCCCCTTCCCCTTTCTCACTCAAACACTCCTTTCCTGATAGACCCATTTCTTGCACTCTGGCGAAGACTTCGAGGAGATTCTCTTCTTCACATCCCTGTGGCGCTGAACTTCTACGCCTACTTGAGATCCGTGTTTTCAGACCCAACCTTTGCTCTCCCGCTTTTCTGGTCAGAGCGACTGCGAAGAAGAATCACGACAGTTCTCCATCTCCTGAAAATGGAGATCATTCAATTCCTGGAGATGATGCTAAATCAAAGAATATTTCTGATGGTAACAAAAGTAATGAAACTTCTTCCCAGAAATCGCAGCACATAAATTTGGACTGGCGAGAATTCAGAGCAAACCTATTTGCTCGTGAGCAGGCAGAAAAGGATGAAGCTGATGTGGATGTCCAGAGTGCAAATGCTCACGAGTCTAAGTCTCTCGGGCTGAAGTGGGCGCATCCTATTCCTATGCCGGAGACTGGCTGTGTCCTTGTTGCCACCGAGAAGTTGGATGGTGTTCGCACTTTTGAGCGAACAGTCGTCCTTCTCCTCAGATCTGGAAGCAGACATCCTCATGAGGGACCGTTCGGTGTCGTGATAAATCGCCCACTCCACAAAAAGATCAAGCATATGAAACCAACCAATATTGACTTAGCAACTACATTTTCTGATTGCTCTCTACATTTCGGGGGGCCTCTTGAGGCAAGCATGTTTTTGCTGAAGACAGGAGAAAAATCGAAACTCCATGGCTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGTGCTCGAAACACCCTGGACGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGTTGGCAACTGGATCAATTGAGGGAGGAGATTGAATCAAATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATTGGTGGAGGCACATCAGATTCCTCATCAGAGGGACTGTGGGAGGAAATTTTGCAGTTAATGGGCGGTCCCTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAGTTTACTTATTTGAAGGAACATTGAAAATATCTGGAGTTAAAATGTGTATTCTAGTTAAAGCCATAAAAAGCTGAAAGCCAAATGTACAGAAGTTAGCTGGCTTTTGAAATTTAGCGGACCTCATCTCTTTCTTTAAGGACAACAACGCCCTTTTATAGCTATTTCTAAATGTAGTTTATGTATATTCTGTTCACATTTGTTTGATTCAATATCTTTAGAAATCTGC ATGGATCTCTTTGCTACCAATGTCAAGAACACCGCCGCCCCTTCCCCTTTCTCACTCAAACACTCCTTTCCTGATAGACCCATTTCTTGCACTCTGGCGAAGACTTCGAGGAGATTCTCTTCTTCACATCCCTGTGGCGCTGAACTTCTACGCCTACTTGAGATCCGTGTTTTCAGACCCAACCTTTGCTCTCCCGCTTTTCTGGTCAGAGCGACTGCGAAGAAGAATCACGACAGTTCTCCATCTCCTGAAAATGGAGATCATTCAATTCCTGGAGATGATGCTAAATCAAAGAATATTTCTGATGGTAACAAAAGTAATGAAACTTCTTCCCAGAAATCGCAGCACATAAATTTGGACTGGCGAGAATTCAGAGCAAACCTATTTGCTCGTGAGCAGGCAGAAAAGGATGAAGCTGATGTGGATGTCCAGAGTGCAAATGCTCACGAGTCTAAGTCTCTCGGGCTGAAGTGGGCGCATCCTATTCCTATGCCGGAGACTGGCTGTGTCCTTGTTGCCACCGAGAAGTTGGATGGTGTTCGCACTTTTGAGCGAACAGTCGTCCTTCTCCTCAGATCTGGAAGCAGACATCCTCATGAGGGACCGTTCGGTGTCGTGATAAATCGCCCACTCCACAAAAAGATCAAGCATATGAAACCAACCAATATTGACTTAGCAACTACATTTTCTGATTGCTCTCTACATTTCGGGGGGCCTCTTGAGGCAAGCATGTTTTTGCTGAAGACAGGAGAAAAATCGAAACTCCATGGCTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGTGCTCGAAACACCCTGGACGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGTTGGCAACTGGATCAATTGAGGGAGGAGATTGAATCAAATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATTGGTGGAGGCACATCAGATTCCTCATCAGAGGGACTGTGGGAGGAAATTTTGCAGTTAATGGGCGGTCCCTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAG MDLFATNVKNTAAPSPFSLKHSFPDRPISCTLAKTSRRFSSSHPCGAELLRLLEIRVFRPNLCSPAFLVRATAKKNHDSSPSPENGDHSIPGDDAKSKNISDGNKSNETSSQKSQHINLDWREFRANLFAREQAEKDEADVDVQSANAHESKSLGLKWAHPIPMPETGCVLVATEKLDGVRTFERTVVLLLRSGSRHPHEGPFGVVINRPLHKKIKHMKPTNIDLATTFSDCSLHFGGPLEASMFLLKTGEKSKLHGFEEVIPGLCFGARNTLDEAAVLVKKGILKPQDFRFFVGYAGWQLDQLREEIESNYWYVAACSSNLIGGGTSDSSSEGLWEEILQLMGGPYSELSRKPKQDM Homology
BLAST of ClCG11G008900 vs. NCBI nr
Match: XP_008441161.1 (PREDICTED: uncharacterized protein LOC103485383 [Cucumis melo] >KAA0037061.1 UPF0301 protein [Cucumis melo var. makuwa] >TYK06588.1 UPF0301 protein [Cucumis melo var. makuwa]) HSP 1 Score: 664.8 bits (1714), Expect = 4.1e-187 Identity = 329/365 (90.14%), Postives = 344/365 (94.25%), Query Frame = 0
BLAST of ClCG11G008900 vs. NCBI nr
Match: XP_004138667.1 (uncharacterized protein LOC101222789 [Cucumis sativus] >KGN63065.1 hypothetical protein Csa_022535 [Cucumis sativus]) HSP 1 Score: 655.6 bits (1690), Expect = 2.5e-184 Identity = 326/362 (90.06%), Postives = 339/362 (93.65%), Query Frame = 0
BLAST of ClCG11G008900 vs. NCBI nr
Match: XP_022993090.1 (uncharacterized protein LOC111489210 isoform X2 [Cucurbita maxima]) HSP 1 Score: 654.8 bits (1688), Expect = 4.2e-184 Identity = 324/364 (89.01%), Postives = 341/364 (93.68%), Query Frame = 0
BLAST of ClCG11G008900 vs. NCBI nr
Match: XP_023550640.1 (uncharacterized protein LOC111808722 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 654.4 bits (1687), Expect = 5.5e-184 Identity = 323/364 (88.74%), Postives = 341/364 (93.68%), Query Frame = 0
BLAST of ClCG11G008900 vs. NCBI nr
Match: KAG6578309.1 (hypothetical protein SDJN03_22757, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-183 Identity = 322/364 (88.46%), Postives = 341/364 (93.68%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy Swiss-Prot
Match: Q3AQ69 (UPF0301 protein Cag_1601 OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=Cag_1601 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.3e-20 Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy Swiss-Prot
Match: Q3B561 (UPF0301 protein Plut_0637 OS=Pelodictyon luteolum (strain DSM 273 / 2530) OX=319225 GN=Plut_0637 PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.9e-19 Identity = 50/173 (28.90%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy Swiss-Prot
Match: B3QMC9 (UPF0301 protein Cpar_0662 OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=Cpar_0662 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.8e-18 Identity = 55/194 (28.35%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy Swiss-Prot
Match: A1BEV6 (UPF0301 protein Cpha266_0885 OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=Cpha266_0885 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.9e-18 Identity = 53/192 (27.60%), Postives = 93/192 (48.44%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy Swiss-Prot
Match: Q8KEM4 (UPF0301 protein CT0663 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=CT0663 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 8.4e-18 Identity = 53/175 (30.29%), Postives = 83/175 (47.43%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy TrEMBL
Match: A0A5A7T638 (UPF0301 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00530 PE=4 SV=1) HSP 1 Score: 664.8 bits (1714), Expect = 2.0e-187 Identity = 329/365 (90.14%), Postives = 344/365 (94.25%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy TrEMBL
Match: A0A1S3B2S1 (uncharacterized protein LOC103485383 OS=Cucumis melo OX=3656 GN=LOC103485383 PE=4 SV=1) HSP 1 Score: 664.8 bits (1714), Expect = 2.0e-187 Identity = 329/365 (90.14%), Postives = 344/365 (94.25%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy TrEMBL
Match: A0A0A0LMD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401250 PE=4 SV=1) HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184 Identity = 326/362 (90.06%), Postives = 339/362 (93.65%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy TrEMBL
Match: A0A6J1JXJ8 (uncharacterized protein LOC111489210 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489210 PE=4 SV=1) HSP 1 Score: 654.8 bits (1688), Expect = 2.0e-184 Identity = 324/364 (89.01%), Postives = 341/364 (93.68%), Query Frame = 0
BLAST of ClCG11G008900 vs. ExPASy TrEMBL
Match: A0A6J1FL02 (uncharacterized protein LOC111445188 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445188 PE=4 SV=1) HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183 Identity = 323/364 (88.74%), Postives = 340/364 (93.41%), Query Frame = 0
BLAST of ClCG11G008900 vs. TAIR 10
Match: AT1G33780.1 (Protein of unknown function (DUF179) ) HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-114 Identity = 207/293 (70.65%), Postives = 241/293 (82.25%), Query Frame = 0
BLAST of ClCG11G008900 vs. TAIR 10
Match: AT3G29240.1 (Protein of unknown function (DUF179) ) HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51 Identity = 112/240 (46.67%), Postives = 145/240 (60.42%), Query Frame = 0
BLAST of ClCG11G008900 vs. TAIR 10
Match: AT3G29240.2 (Protein of unknown function (DUF179) ) HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51 Identity = 112/240 (46.67%), Postives = 145/240 (60.42%), Query Frame = 0
BLAST of ClCG11G008900 vs. TAIR 10
Match: AT3G19780.1 (LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-14 Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 0
BLAST of ClCG11G008900 vs. TAIR 10
Match: AT3G19780.2 (LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1). ) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-14 Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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