ClCG11G007810 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G007810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein PCF11-like
Location	CG_Chr11: 10663853 .. 10664335 (+)
RNA-Seq Expression	ClCG11G007810
Synteny	ClCG11G007810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATAACCACAATATGATTCCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG

mRNA sequence

ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATAACCACAATATGATTCCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG

Coding sequence (CDS)

ATGGCTACTTTGCATAAATTCAAGCTCTTAGCCTCTCAATGTGCCGTCGCTGGTAGCCCTACTCCAAGCCCCACTGCTAGTCCCGTCATTCACCTCCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCACTGATCCTCAAGATGTCGACGACCACGACGACGATAACCACAATATGATTCCGGAGAAAAACGAGAAGGAAGTCCGAGCCAGACGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGAGAATCGAAGAACAGGAGGGATTGTTAACGGCGGCCAACACCAGCGCCGCTGGAATCGGTTCGCCATCTACCACTCGCCGCTCTCTTAGACCAATCTCGGCCACATTTCGGTACAGATTTCTCCGGCGAGCTTGGCGGCCGGTGCTCGTTGCCATTCCCGAGTAG

Protein sequence

MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE

Homology

[Close]

BLAST of ClCG11G007810 vs. NCBI nr
Match: XP_038885993.1 (uncharacterized protein LOC120076298 [Benincasa hispida])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 150/160 (93.75%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAGSPT SP ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGSPTRSPNASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
            QDVDD DDD+  MIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEE+EG LTAANT
Sbjct: 61  SQDVDDDDDDSDLMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEEEGFLTAANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 160

[Close]

BLAST of ClCG11G007810 vs. NCBI nr
Match: XP_022993370.1 (uncharacterized protein LOC111489414 [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 4.3e-72
Identity = 147/160 (91.88%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQE LLT ANT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of ClCG11G007810 vs. NCBI nr
Match: XP_022939119.1 (uncharacterized protein LOC111445119 [Cucurbita moschata] >KAG7015924.1 hypothetical protein SDJN02_21028, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71
Identity = 146/160 (91.25%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQE LLT ANT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of ClCG11G007810 vs. NCBI nr
Match: XP_023551541.1 (uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo] >KAG6578345.1 hypothetical protein SDJN03_22793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278.1 bits (710), Expect = 4.8e-71
Identity = 145/160 (90.62%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQE LLT ANT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
            AAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 GAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of ClCG11G007810 vs. NCBI nr
Match: XP_023546418.1 (uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 147/160 (91.88%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S D
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTA N 
Sbjct: 61  PQDVDD-DDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINA 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SAAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of ClCG11G007810 vs. ExPASy TrEMBL
Match: A0A6J1JYC4 (uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 147/160 (91.88%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQE LLT ANT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of ClCG11G007810 vs. ExPASy TrEMBL
Match: A0A6J1FG66 (uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC111445119 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.0e-72
Identity = 146/160 (91.25%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAVAG PT SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLEDKVSDRRIEEQE LLT ANT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+PS TRRSLRPISATFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of ClCG11G007810 vs. ExPASy TrEMBL
Match: A0A6J1JSX9 (uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 147/160 (91.88%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S D
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDASAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEVRARRKLKDLFVSSPPLED VSDRRIEEQEGLLTA NT
Sbjct: 61  PQDVDD-DDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDTVSDRRIEEQEGLLTAINT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SAAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of ClCG11G007810 vs. ExPASy TrEMBL
Match: A0A6J1H7N8 (uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC111460905 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70
Identity = 146/160 (91.25%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQCAV GSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD S D
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD DDD+ NMIPEKN+KEV+ARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTA N 
Sbjct: 61  PQDVDD-DDDDENMIPEKNDKEVQARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINA 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+ STTRRSLRPIS TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SAAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of ClCG11G007810 vs. ExPASy TrEMBL
Match: A0A6J1BYN1 (uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006461 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.7e-70
Identity = 147/160 (91.88%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSTD 60
           MATLHKFKLLASQC VAGSPT SPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNS D
Sbjct: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAANT 120
           PQDVDD +DD  NMIPEKNEKEVRARRKLKDLFVSSPP +DKVSDRRIEEQEGLLTA+NT
Sbjct: 61  PQDVDDEEDD-ENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNT 120

Query: 121 SAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           SAAGIG+ STTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 SAAGIGT-STTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 158

[Close]

BLAST of ClCG11G007810 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 75/173 (43.35%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 3   TLHKFKLLASQCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSTDP 62
           +L KFKLLA+ C+       SPT SPVIHL  RRRKTLR+LL R +DR R P   N+ D 
Sbjct: 2   SLQKFKLLATHCSTVAE---SPTRSPVIHL--RRRKTLRLLLTRSSDRWRLPEIQNNVDE 61

Query: 63  QDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLE--------DKVSDRRIEEQEG 122
               D               ++R+ RKL DLFVSSPP E        DK +   +E +  
Sbjct: 62  SKKTD------------KRGKIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMERD 121

Query: 123 LLTAANTSAAGIGSPSTTRR-----SLRPISA-TFRYRFLRRAWRPVLVAIPE 161
           +     ++ AG G   T RR     S+RP+S+ T R R LRR+WRPVLV IPE
Sbjct: 122 VPVNGVSNNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of ClCG11G007810 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 1   MATLHKFKLLAS----QCAVAGSPTPSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQ 60
           ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML ++ +D RR   +
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNL--RRRKTLRMLFDKSSDSRRRNLR 62

Query: 61  DNSTDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVS--SPPLEDKVSDRRIEEQEG 120
                 Q +++  + + N   +K       RRKL++L V+  SPP + +     I E+  
Sbjct: 63  ------QILEESPESDGNSGNKKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGEERS 122

Query: 121 LLTAANTSAAGIGSPSTTRRSLRPISA-TFRYRFLRRAWRPVLVAIPE 161
            ++  N ++ G G   T RR     S  +FR R LR+ WRPVLV+IPE
Sbjct: 123 EISPLNVTSNGDGRELTARRFGSSGSVQSFRLRILRKPWRPVLVSIPE 162

[Close]

BLAST of ClCG11G007810 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 59/166 (35.54%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 1   MATLHKFKLLASQCAVAG-SPT--PSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDN 60
           MATL +FK L +QC VA  SPT  PSP  SP++ L RR++ TL+MLL+     R      
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQL-RRKKTTLKMLLSLASPSR------ 60

Query: 61  STDPQDVDDHDDDNHNMIPEKNEKEVRARRKLKDLFVSSPPLEDKVSD---RRIEEQEGL 120
             + Q +  H           + K+V A RKLKDLFVSS   E++  +    + + +E +
Sbjct: 61  -REQQPLIHH-----------HHKDV-AGRKLKDLFVSSSSAEEEQEEDERPKGKTKEEV 120

Query: 121 LTAANTSAAGIGSPSTTRRSLRPISATFRYRFLRRAWRPVLVAIPE 161
           L A                   P+   F  R L+RAWRP L  I E
Sbjct: 121 LAAMAAKLNAASRLQCESADAAPVWFGFSKRLLQRAWRPKLGTIHE 146

The following BLAST results are available for this feature:

BLAST of ClCG11G007810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885993.1	1.1e-72	93.75	uncharacterized protein LOC120076298 [Benincasa hispida]	[more]
XP_022993370.1	4.3e-72	91.88	uncharacterized protein LOC111489414 [Cucurbita maxima]	[more]
XP_022939119.1	1.6e-71	91.25	uncharacterized protein LOC111445119 [Cucurbita moschata] >KAG7015924.1 hypothet...	[more]
XP_023551541.1	4.8e-71	90.63	uncharacterized protein LOC111809331 [Cucurbita pepo subsp. pepo] >KAG6578345.1 ...	[more]
XP_023546418.1	1.4e-70	91.88	uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG11G007810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G007810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYC4	2.1e-72	91.88	uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414...	[more]
A0A6J1FG66	8.0e-72	91.25	uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JSX9	1.5e-70	91.88	uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551...	[more]
A0A6J1H7N8	2.0e-70	91.25	uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]
A0A6J1BYN1	9.7e-70	91.88	uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of ClCG11G007810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66890.1	1.4e-20	43.35	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	1.4e-15	39.29	50S ribosomal protein-related	[more]
AT1G68430.1	4.2e-09	35.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..81
None	No IPR available	PANTHER	PTHR34542:SF6	50S RIBOSOMAL-LIKE PROTEIN	coord: 1..160
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G007810.1	ClCG11G007810.1	mRNA