ClCG11G007400 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATTAAGTTACCCACTCCTTTTTCGTCATAGCATCTTGATTTCGAAGGTGTTTGATTCGCTGTCCAACGAGATCAAGATAGTTTTAGGACGTATTGGTGTATATTGGTACTTTAGAAGGTGTTTGATCCGGTGTCCGACGAGATCAAGATAGTTTTAGTACGTATTGGTGTGTATTGGTACTTTAGAAGAACCCTTTTGGATTAATTATAGTTGTTGGAAATTGAGTTTCTAACTCTAATTCTTGGTTTATGCATAGGTTGGAACCATTGTTTAAGGTTTTGAAGTGCTATGGGGCTAGTAGTGATGTTGCTTCTGCATTAGTTCATGTTTCTAAACGTTTTCAGTGTTCTAATCAAAGTTTCAGAATAGCAATTTTGCCCTCATTTTTATAAAACCTCTTTTAAATGTTTCCCCGGTGATCCCAAATAGAAAATTTATTTTGATTTGAACAAATTGATTCAATGATGTTACTATTATTGATACAATGTGTGTTGTGCGCGGGCACACACACACAAAGAGGCTTGATTTTGCTAATGGAATGAGAGTATGTCAATGAAAATGAAAATACTCTTAGAAATGGTAATCATTTATAGTATAGGAAACCTTGCTGTGTTCATATTTTCTGAAACATTCATGTTCTTATTTCTTGATTTATCTTAGCATATATTGAACGTGTAATTGGATTAATTTTGGACTTTGTACATGATTGATTTGACCAAAAAAACAAGGAGAGATTGAATGAAAGTTGCACCTTGCTTTGGCTGTTTTAGGCTCTGAGGAGCGTTTTGCCTTTCCCTCTACTGGAGTAATTGAGAGAACACACTAATTTTACCTGAATGTCTTGAAATGTCTTGAAACTTGTTTCTTTTTGTATTTTTGAAGATAATAGGGATTACATGCAACTTTCCAAGTTTAGTTGATTTTTAGTTTTATAATGGTTTGGAATGTTCAAATCCCTGTTTATACCATTGTTAAAATAATAATAATAATTATAAAAAGCTTGAAGCTTGTGAATAATGTAATTTTCTCCTTTATTAGATTCTCCAAATGGATCCAGAGGCTGCACGAACTGCTCGGGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCAGGGATCGATCGGCACACTCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCTGGGAGCCACCCTCATCAGAGACCGTCGTCTCCGGCAACAAGTCATAAGTTCCCCAAGCAAAGAAACAACTCTTTTCTTCTTCTGTTGAAGGTGGCTAAACACATCTATATGTTCTTAAACCACTTCCCTATATGTGTAGCTTACTTGGATATTGTGATAGATGGCTTTTGGTGTTTAGAATGTTGAAGTATTCGCTCTCTTGTGTTCAGCCCTTCTGCCCTATTTTGTTGCTTTGCAGATTGCATGTTTAGCTGATTTTGTCAAGATAACAGAATGACACACATGTATATATTTGTCCCACAGATTCAAGATCTGTTGGAATGAAGGTGAGGGAGCATTGTAACATTTGTTTTTAGACAAGAAAATATATGTTTGATATGAAAAAAAATGGGTAATGAGAACAGTA ATGAGATTAAGTTACCCACTCCTTTTTCGTCATAGCATCTTGATTTCGAAGGTGTTTGATTCGCTGTCCAACGAGATCAAGATAGTTTTAGGACGTATTGGTGTATATTGGTTGGAACCATTGTTTAAGGTTTTGAAGTGCTATGGGGCTAGTAGTGATGTTGCTTCTGCATTAGTTCATATTCTCCAAATGGATCCAGAGGCTGCACGAACTGCTCGGGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCAGGGATCGATCGGCACACTCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCTGGGAGCCACCCTCATCAGAGACCGTCGTCTCCGGCAACAAGTCATAAGTTCCCCAAGCAAAGAAACAACTCTTTTCTTCTTCTGTTGAAGGTGGCTAAACACATCTATATGTTCTTAAACCACTTCCCTATATGTGTAGCTTACTTGGATATTGTGATAGATGGCTTTTGGTGTTTAGAATGTTGAAGTATTCGCTCTCTTGTGTTCAGCCCTTCTGCCCTATTTTGTTGCTTTGCAGATTGCATGTTTAGCTGATTTTGTCAAGATAACAGAATGACACACATGTATATATTTGTCCCACAGATTCAAGATCTGTTGGAATGAAGGTGAGGGAGCATTGTAACATTTGTTTTTAGACAAGAAAATATATGTTTGATATGAAAAAAAATGGGTAATGAGAACAGTA ATGAGATTAAGTTACCCACTCCTTTTTCGTCATAGCATCTTGATTTCGAAGGTGTTTGATTCGCTGTCCAACGAGATCAAGATAGTTTTAGGACGTATTGGTGTATATTGGTTGGAACCATTGTTTAAGGTTTTGAAGTGCTATGGGGCTAGTAGTGATGTTGCTTCTGCATTAGTTCATATTCTCCAAATGGATCCAGAGGCTGCACGAACTGCTCGGGAATCACTAGACCTTGCATTTCATATGTCTAACGTACTTGATGCAGGGATCGATCGGCACACTCTCTCTGTCCTCATTGCTCTTTGTGACATGGGTGTGAACCCTGAAGCACTGGCTGCTGTTGTCAAGGAACTACGCTGGGAGCCACCCTCATCAGAGACCGTCGTCTCCGGCAACAAGTCATAA MRLSYPLLFRHSILISKVFDSLSNEIKIVLGRIGVYWLEPLFKVLKCYGASSDVASALVHILQMDPEAARTARESLDLAFHMSNVLDAGIDRHTLSVLIALCDMGVNPEALAAVVKELRWEPPSSETVVSGNKS Homology
BLAST of ClCG11G007400 vs. NCBI nr
Match: KAG6598967.1 (ALBINO3-like protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.8 bits (338), Expect = 5.5e-28 Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 0
BLAST of ClCG11G007400 vs. NCBI nr
Match: XP_038889535.1 (mitotic-spindle organizing protein 1B [Benincasa hispida] >XP_038889536.1 mitotic-spindle organizing protein 1B [Benincasa hispida]) HSP 1 Score: 132.9 bits (333), Expect = 2.1e-27 Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of ClCG11G007400 vs. NCBI nr
Match: XP_022973921.1 (mitotic-spindle organizing protein 1B-like [Cucurbita maxima] >XP_022973922.1 mitotic-spindle organizing protein 1B-like [Cucurbita maxima]) HSP 1 Score: 132.5 bits (332), Expect = 2.7e-27 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of ClCG11G007400 vs. NCBI nr
Match: XP_011649034.1 (mitotic-spindle organizing protein 1A [Cucumis sativus]) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-26 Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of ClCG11G007400 vs. NCBI nr
Match: XP_008441751.1 (PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441752.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441753.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441755.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441756.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo] >XP_008441757.1 PREDICTED: mitotic-spindle organizing protein 1A-like [Cucumis melo]) HSP 1 Score: 127.5 bits (319), Expect = 8.7e-26 Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy Swiss-Prot
Match: Q9M0N8 (Mitotic-spindle organizing protein 1B OS=Arabidopsis thaliana OX=3702 GN=GIP1 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.8e-19 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy Swiss-Prot
Match: Q9C9T3 (Mitotic-spindle organizing protein 1A OS=Arabidopsis thaliana OX=3702 GN=GIP2 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.2e-17 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy Swiss-Prot
Match: A9NKD9 (Mitotic-spindle organizing protein 1 OS=Picea sitchensis OX=3332 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.2e-16 Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy Swiss-Prot
Match: B5FXZ4 (Mitotic-spindle organizing protein 1 OS=Taeniopygia guttata OX=59729 GN=mzt1 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 24/47 (51.06%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy Swiss-Prot
Match: Q08AG7 (Mitotic-spindle organizing protein 1 OS=Homo sapiens OX=9606 GN=MZT1 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08 Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy TrEMBL
Match: A0A6J1I8U7 (mitotic-spindle organizing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111472550 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy TrEMBL
Match: A0A0A0LMZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G094370 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 8.5e-27 Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy TrEMBL
Match: A0A1S3B468 (mitotic-spindle organizing protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103485818 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 4.2e-26 Identity = 66/71 (92.96%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy TrEMBL
Match: A0A5D3D1N9 (Mitotic-spindle organizing protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003990 PE=3 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25 Identity = 65/72 (90.28%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of ClCG11G007400 vs. ExPASy TrEMBL
Match: A0A6J1I9X9 (mitotic-spindle organizing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111471408 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24 Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of ClCG11G007400 vs. TAIR 10
Match: AT4G09550.1 (AtGCP3 interacting protein 1 ) HSP 1 Score: 96.3 bits (238), Expect = 2.0e-20 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of ClCG11G007400 vs. TAIR 10
Match: AT1G73790.1 (Protein of unknown function (DUF3743) ) HSP 1 Score: 90.9 bits (224), Expect = 8.4e-19 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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