ClCG11G004370 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGTCGGAGATGACGCCGTCGGCTCGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCACCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGTCATTGTTCATACAATTAAATTATTACTAAACTCAAAAGTTTCAAAATTAACATTATATCTAAAATATTAAATTATTAATAGTAACAAAAGTTTAAATGTAAAGATTATTGTACATTTAGGCACATTTAGGCTCGCTTTATATATATTAAAAAATAATGTTTGTTTTCTCATTAATTATTTATACGTTTTTTTTCTTTTCTTATAAACTCATTTTTAAAAACTGCTTGTAGGCACATTTAGACTCGCTTTATATATATTAAAAAATAATGTTTGTTTTCTCATTAATTACTTATATGTTTTTTTTTCTTTTCTTATAAACTACTTGTTTTAATTTTCAAATTTTATCATGGTTTTTAAAATTTTTAAAGGAGGTGATACAACCAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTAGTAATTATAGCTAGTATTTATTTTAATTTTTTGAAATTTAGCTGTAGATTAAATGTTTTTGTAAAGGAAAAAAAAAGAAAGAATTATGAGAAAAAGCGTGAAAATAAAAACAAGCACAAATTTAAAAAGGTGAGTGAATGTGAAAGGAGGAAATGGAAAGTAATGAAATTAAGACGTTATATTTAATAACTTATTCATATTGTTGGATGCAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGTAACAACATAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCTACAACAATATATTTTTATCTCCCCTTTTCGTTTTATCCTCCACTTTCAAAATGTTTTACTTTTAGTCCTTAATTAGTTTCGAGTTTGGTTTCGATTTAGTTTCTAAATTTTAACATGTTATAATTTTATTCTTGAGATTTGAGTTTTGTTTCAATTTAGTCTCTACGTTTTGAGATTTACAATTTTAACCTTGTTTTTTCCATTAAAAATTCACTTCTCCACTTAGTGGTTAATGTCTATTAATTAATTTAGAAGAATAAAAAGAATTTATTTTAAAATTTCACTTTGTAATTATTTTAAATTAATTTATAGATATTGGTGCCAAAGACTAAATTGAGTATTTAATGAAAAATTGAAGTTAAAGGTGCAAATTTTAAAACCTAAGGATCAAGTTGAAACAAGACTCAAATCTCAATGGTAAAATTGTAACATTTTGAAACTTATAGACTTAAATTGAAATCAAACTCAAAACTTAAGGACTAAAAATGTAACATTTTGAAACCTAGGGACCAAAATAGACCCAAATCCTAAGGACCAAAAATGTAATTTTTTTTCCTCTTTTTTGGGTTAAATTAAAATTTTAATATTTGAACTTTCGATTTTCTTTTTTTTAAAAAAACACAAATGTACTAAAAATTGAAAATTTAGAATTTTATTTGACATAAAAAATTTAAATTTATATCTAATAGATCAATTAATTTTATAAAGTTTCAAACTTGTCAAAAAATCTATTAGACACAAAATTGAGAATTCACCAATATATTAGATACTTCGAAGGTTCATGAACAAAATATACACAAACACCAAAGTTTGGATCTAAACCTATCATTTATTACTTTTTTAATGGTTAAATTAAAAGTTTAGTTCTTCAACTTTCAAAATGGGTCTAATAGGTTTTTAAAACTTTTAATTTTATGTCAAATAGGGCCCCTAGACTTTAAAGAAAAATGTCTAATAAATTCTTAAATTTGTGTTTAATAGATATCTATTTTTTTTCAATTTTATATCTAATATATCTTTGACTTCTTCGACATGTTTATTAAAATGAACATATATACTAAACATAAAATTGAAATTTTAGGATTTAATTAGATATTAAATTCAATTTTGTATCTTAATCATTAGTTATCAATTAATCTTTTCTTTTGAAAAAATTGAATATATGAGAAACACCTTTTAGTTTAGAAATTATTAAATAAACAATTTATTATAAAAGTTAAGAGTAATTTAAAGAATTTATTTTTAGTATTGTTTTTGTTTGTTTATGGGGAAAATGGAATGATGTAAATATGTGAATATTGCAGGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGGTCATAAATTCATCCAAATTAACTCAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAGACTTTTTGAAAATTTTCACTAAATTTTTTTTTTTTTTTTTTCTTCCTCCCCCTCTGTCTCGTGCAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTAAGATTAATAATCATCCAACTCGGACGTATTGCTAATAGAAGTCTATCATATATAAATTTTGTTATGTTTGCAATTTTTTATAAATGTTGCTTTATACTTAATTATTTGCCCTAAAAATAATTTTCTTATAAAAAACAAAAAAGGTAGGAAAAAATCCATCCTTCCTCTCTTGGGTTCCGTCGAGCATCATCATCTCCTACCTCTCCTTCCTTCAATCCCTCATGGAAGCTTTGTTCCACATCGCCAGTTTGGGAGATAACAAATAAGAGTTTAAATACATGGGATTGTTTAAATACATGGGTTTTATCTCAAAATCAATTTCAGTGAGATCTTCAACATGCTACCGTAATTATTTTTAAATTGAATACTTATTCGAGTTGCAATATAGTGGGCCAAAGGAGAGGAGGGCTAATGGAGGGAGAGGAATGAGGGATTTTTTTTTTTTTATTTTTAACAAAATTAACACATCACCATTTTTTATTATAAAAATGTCACATCGAGGTCCCAAATTCATATTATATGATTTTCTGAACTTGAGGATAAGATTGAATAATCTTAAAATCTAAATACAAAATTTTTTTATTGTCCAAACTTTAGAGACCAAAAGTATATGAACGTATTCAAAAATGTAATTTAATACTAAATAATCTTTTTTTTTAATGGTTAATTTCAATATTTTTATATTTAATAATAAAAAAACAATAATTTTCGTTTAACATTCTAACAAATTTTTTTTAAAAAATTACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTGTAATTTCCTCTTCTTTTTTTTTCCTCTCTAATTCAAATTCTTCATCTTTTAAATGGTTTTTTTTTTCTTCTTTTTTGTAGCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA ATGTTGAAGTCGGAGATGACGCCGTCGGCTCGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCACCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA ATGTTGAAGTCGGAGATGACGCCGTCGGCTCGACTCAAACGGCAGCGACCCCATGGCGACTGCCGGAGCTTGTCTTCCGTCTCGACTCCGGCAAGTCGGGTCAACCATTTTGAGGATCTAGTTGCACCTGGAGGTTGGCCCGAGTTAGCTAAGTACGAGATCTCCTCTACGAAGTTTCGAACCAATCAGACGTGTTCACTACTAACAGAGGCGAACTCCGTGGTGGAGGGAGAGATTGCAAAAAAGAGAAAAGGGAAGAAGAAGGAAATGAAATGGAAAGGGAGAGATGACAATAATAATGTTGAATGGGGGAATGGAAGAGAGAAGAAAATGAAAGGAAAGGTTGAAGAAGATGAAGATGATGAAGATGAATCAAAGATTACGGAGGAAAGAGAGAGATGGAAATGCAATTCAAAAGCTTCAAAAGAAGTTCAAAAATCGGATTATGTTCATGTGAGAGCACGTCGAGGCCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGCAAGGAGAGAGAAGATAAGTGAGAGAATGAAGTATTTGCAGAATTTGGTCCCTGGGTGTAACAAAATTGCTGGAAAAGCTGGAATGCTTGATGAAATTATTAATTATGTTCAATCTCTCCAACAACAAGTTGAGTTCTTATCTATGAAGGTGGCTGCTCTCAATCACAGAGTTGATTTCATCAATGTAGATGACTTCTTGGCCAAACAGGTGTTTCCGACGTTAACAACCGATTGTTCATCCTACTTTAATCAACTTGGAAAGGGCTCAACCTCTGTAACAGTCCCACAAACTCCATTGATCAATAACAACTTGTCTTCAATTACTCATTTTGAACTGTCTTCAACTTGGGGAGGTGATTTACAAAGGTTTGAAGAAGGAGGGCCTCCATTGTTGTCGCCATCAAGCTTTTTATCGCAGCAATGTTCAGGCATTGAAGATGAAAATGAAACATTATTTTTGGACCACAAACTTGTTCCATTTTAA MLKSEMTPSARLKRQRPHGDCRSLSSVSTPASRVNHFEDLVAPGGWPELAKYEISSTKFRTNQTCSLLTEANSVVEGEIAKKRKGKKKEMKWKGRDDNNNVEWGNGREKKMKGKVEEDEDDEDESKITEERERWKCNSKASKEVQKSDYVHVRARRGQATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVEFLSMKVAALNHRVDFINVDDFLAKQVFPTLTTDCSSYFNQLGKGSTSVTVPQTPLINNNLSSITHFELSSTWGGDLQRFEEGGPPLLSPSSFLSQQCSGIEDENETLFLDHKLVPF Homology
BLAST of ClCG11G004370 vs. NCBI nr
Match: XP_038901962.1 (transcription factor bHLH62-like isoform X3 [Benincasa hispida]) HSP 1 Score: 512.3 bits (1318), Expect = 3.1e-141 Identity = 280/337 (83.09%), Postives = 296/337 (87.83%), Query Frame = 0
BLAST of ClCG11G004370 vs. NCBI nr
Match: XP_038901961.1 (transcription factor bHLH63-like isoform X2 [Benincasa hispida]) HSP 1 Score: 511.5 bits (1316), Expect = 5.3e-141 Identity = 280/339 (82.60%), Postives = 296/339 (87.32%), Query Frame = 0
BLAST of ClCG11G004370 vs. NCBI nr
Match: XP_038901960.1 (transcription factor bHLH63-like isoform X1 [Benincasa hispida]) HSP 1 Score: 506.5 bits (1303), Expect = 1.7e-139 Identity = 280/341 (82.11%), Postives = 296/341 (86.80%), Query Frame = 0
BLAST of ClCG11G004370 vs. NCBI nr
Match: KAA0045545.1 (transcription factor bHLH78 [Cucumis melo var. makuwa] >TYK28847.1 transcription factor bHLH78 [Cucumis melo var. makuwa]) HSP 1 Score: 465.3 bits (1196), Expect = 4.3e-127 Identity = 271/348 (77.87%), Postives = 287/348 (82.47%), Query Frame = 0
BLAST of ClCG11G004370 vs. NCBI nr
Match: XP_004148863.3 (transcription factor bHLH78 isoform X2 [Cucumis sativus] >KAE8651873.1 hypothetical protein Csa_006710 [Cucumis sativus]) HSP 1 Score: 462.2 bits (1188), Expect = 3.7e-126 Identity = 263/345 (76.23%), Postives = 290/345 (84.06%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy Swiss-Prot
Match: Q8GY61 (Transcription factor bHLH63 OS=Arabidopsis thaliana OX=3702 GN=BHLH63 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.4e-35 Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy Swiss-Prot
Match: Q93VJ4 (Transcription factor BEE 2 OS=Arabidopsis thaliana OX=3702 GN=BEE2 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33 Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy Swiss-Prot
Match: Q9SRT2 (Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.8e-33 Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy Swiss-Prot
Match: Q9ZPW3 (Transcription factor HBI1 OS=Arabidopsis thaliana OX=3702 GN=HBI1 PE=1 SV=3) HSP 1 Score: 139.0 bits (349), Expect = 9.3e-32 Identity = 95/192 (49.48%), Postives = 116/192 (60.42%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy Swiss-Prot
Match: Q9FJL4 (Transcription factor bHLH78 OS=Arabidopsis thaliana OX=3702 GN=BHLH78 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30 Identity = 99/210 (47.14%), Postives = 128/210 (60.95%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy TrEMBL
Match: A0A5D3DY78 (Transcription factor bHLH78 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00550 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 2.1e-127 Identity = 271/348 (77.87%), Postives = 287/348 (82.47%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy TrEMBL
Match: A0A0A0LIZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247590 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 2.0e-93 Identity = 217/345 (62.90%), Postives = 245/345 (71.01%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy TrEMBL
Match: A0A6J1L7P5 (transcription factor bHLH63-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499945 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 7.5e-93 Identity = 216/345 (62.61%), Postives = 251/345 (72.75%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy TrEMBL
Match: A0A6J1G5R2 (transcription factor bHLH63-like OS=Cucurbita moschata OX=3662 GN=LOC111451059 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.7e-92 Identity = 216/343 (62.97%), Postives = 242/343 (70.55%), Query Frame = 0
BLAST of ClCG11G004370 vs. ExPASy TrEMBL
Match: A0A6J1L4Z2 (transcription factor bHLH63-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499945 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 2.9e-92 Identity = 215/345 (62.32%), Postives = 250/345 (72.46%), Query Frame = 0
BLAST of ClCG11G004370 vs. TAIR 10
Match: AT4G34530.1 (cryptochrome-interacting basic-helix-loop-helix 1 ) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-36 Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of ClCG11G004370 vs. TAIR 10
Match: AT4G36540.2 (BR enhanced expression 2 ) HSP 1 Score: 145.6 bits (366), Expect = 7.1e-35 Identity = 81/139 (58.27%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of ClCG11G004370 vs. TAIR 10
Match: AT4G36540.1 (BR enhanced expression 2 ) HSP 1 Score: 144.1 bits (362), Expect = 2.1e-34 Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of ClCG11G004370 vs. TAIR 10
Match: AT3G07340.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.7e-34 Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 0
BLAST of ClCG11G004370 vs. TAIR 10
Match: AT2G18300.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 6.6e-33 Identity = 95/192 (49.48%), Postives = 116/192 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|