ClCG11G002390 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G002390
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein NUCLEAR FUSION DEFECTIVE 6
Location	CG_Chr11: 2514792 .. 2518021 (+)
RNA-Seq Expression	ClCG11G002390
Synteny	ClCG11G002390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTGAGACTTCTCTCTTTCCTCCATTTAGAATCATAGAATCGTTAGTTACAGAAAGAAATTCGGTTCAATTCTTTACTGTGGAATAGATTTTGACAATAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATACCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCGTTTGTTTGTTCACACTTCATGGATTTTTTTTCCCTCAAAATAATGTCGGATGTTTTTATAGATTTTAGGATCTGATCATAGTTCGGGTCTAGTTCAATGCATATGTCTTGTGGAATTCCAGTACGATTGAATTAATCGGCCTGATGCTTGCCTGTACTACTAGAATTGCCATCACCTTTGAATTGTGACTAGAGCCATATAGGTGAAAATGATAGATGGAAAACATCACTTTGAGTTGGTGTATGAATGAAGCAAGCTGAGTGATGCAATCAGCTTTAGTATTTGAAAATTTAATATAACTGATCGTATATAAGAAGTAGCCACAGTTGATTTCACAACTTTAGCATTAATCTAGGTTTTGAACAACTTAACTGTGGTAGATTACTTTTATGTGTTGACTCTTCTAATTTATCACCAAGCTTCAAAGTTGTCTCTCAAGTGATATAGTTTTCAACTAGTTGATGGTAAAGAATATTTCTGTTCTTCAATTTATGAACCCTTCAAAAAAAAAAAAAAAAAAATTGTGATGCATATCTCAACATTAGTGTCATCATATCATTTTTATTCTATCTATTATTACCAATGTCTGATATGTGAGTGTATACCCATACTAACATATGACATCTCAGTTATTTTCAATGGAATATCAGTTGATGCTACAATTCATAGAACTACATCTCTTAGAATTAATGGTTTTGTCATGACTCATGGGTCGTCACTTAGTAAGTTTTTGGTGGCTGGTGGGTGCACGTGTTTGGGTTATTTGGCCGGAAAGAAATCAAAGAAATGAATTGTTGAACATTTGAATACATTTTCTCCACTTACCAAAAAACTCTTGAACCATTTTTTGGTTCTTAGAGTTAGTGTAATTATTATTCGATTGGTGTTCAAGTTAATAGGAGACAGGAAAGTTTCTTTTCTGTGTGTGCGTGCAGGGCATTTAATTTTTGGCTAGTTGGGGGTTTCTCTTCCTCCCTATTCAATGTAAAATACTCCTTTGAACAAGTACCTTCTTTTCTTCCTCAGATGTTGCCACATCTTATAGTGACAACAAAACTACCCGAAGAAAGTAATCCATTCGATACGTTTCGTTATGGTAAAAAAATAAACATTACTAACTTCCAATGACAAGAAGTTGGTAGCATCAAGTGGGGTAAGAATTAAAATAACCCCACTTGCACCTGAATCGTATGCTTTCTTAGGTGGCTATGATGATAATGACTCTTTGTTCATTCTCTGCTGGTTCACTGGGAAGTTTTAGGGATTGTTAATTTTGTTTTTATGGACTTGGGTAGTTCTTCCAAAAGCTGAGCTGTACTTCAGATGCTGTTAGGTTCAAAATTCAGAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTAATCAAAATTTTGGCATCTTTCTTGGCTCTTAAATTTTGGTTAGATGTCTAGTATTCTATCTCCCCCCTTATATTTTCTTTATGATAGTTGTATGCACTAATTGAAACTTCTGCGCTTGAGAACGAGAAGAGTGTGAAAGTATGGGGCAAAGAAAATCATTTAGGGGCATTTCAGGCTTGAGTTTGGCATCTTCAAGCCTAGGTTTTAGTACGTCTAGGGGTTTAAGTCAACGGTTTGGCAAGTTGTTGGGTTGTGCCGCTTTAGAAAGCATGGATTTGGAGAAATAGTGTGAGGGGGCTTGAATAGTGGGCTATGGAGCACAGACACAAAAACGGGATATGGATATGATAGGATACAACGATATATCAATTTCTAAAAAACTAAGATACAGATACGTCATTTATATATATAAAAATTTAACCTAAAACACTAAATATAATCCACCAAAAGGCACACTTTGAAGAAATAGGTTTCTATCCTGTGAAGAAGATGAGGGTGGTAGGACAAGGTTGAGCGTGGGTGTTGCTTAGTTGTAGTGGCATGGCTTAATTGTAGTCGAAGAAATGAGTTTTTGTTCTGAAAAGAAGATTGCGGGGAGGGGGCAGGGGTCATGACTCATGACTCGTGGATTTGTTGTGAGAGCAGGGAAACGAGGAAATCTCATTTTACGGTTTATTTGTCCTTCTTTTAGTTTATTTTTCTATTGGGCTGTTAGATTGGGCTTCATAATTGAAAATTTTAAAATAGGTTGTGGGTTGAAAAAATAAAATCCAGCCCAAAAAATGCCATTGGCGTGACCCCTCCACGTATCTGGAGGGGGACACACACAAATTGGAAAAAAAAGACAAGATACTTCATTTCATGTATTTAACACGCATCTCTCACGTATATGGATGTATATGTTATCGATTTTCTGCACATTTTGAAGTATCTGTGTTTCATAGAGAGTGGGTTATTGTTCAAACTCGTTCGTCTCTTCAATAAAATACGGTTTTGGAAACTCCTCATCCTAAACATCGGTTAAGCTTGGGAAGCCAAAACCATGTCCCAAATGCTTCTTTACTTATTATAAGTTGTTTGAAAATGTCTTCTGAGTTCTAACATTAACTTTTGTTAATTTCATTCATGGGAGAAAGTTATGTATGCAAGTTTGTAGTTCATCATTTCAATTAGATTCATGCAAGACAAGAATTCCCTTTGATTCTGTTTTGTCTTCCCTGCAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

mRNA sequence

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATACCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

Coding sequence (CDS)

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATACCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

Protein sequence

MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLVNADDSSLLYLLEACCEGSLPNIQTRLSQSRLMLNCLSSYKARRVKIVGIFTKTKVFQCLYDGFALQEVVLCSFLFIDN

Homology

[Close]

BLAST of ClCG11G002390 vs. NCBI nr
Match: KAA0061549.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44
Identity = 107/119 (89.92%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLVNADDSSLLYLLE 120
           SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGMFCLS FLHL LVNADDS LLY+LE
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNADDSPLLYVLE 119

[Close]

BLAST of ClCG11G002390 vs. NCBI nr
Match: XP_038889658.1 (uncharacterized protein LOC120079520 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-35
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLK VSRLSSRLQSLAPKFNKRSS SELSPFKS CQSQPSTASTSRLPCTSRLPVELS
Sbjct: 1  MASLKTVSRLSSRLQSLAPKFNKRSSYSELSPFKSPCQSQPSTASTSRLPCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. NCBI nr
Match: XP_004139345.1 (uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_019508 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-34
Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSLAPKFNKRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. NCBI nr
Match: XP_008458440.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 7.8e-33
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-32
Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSELSPFKS+CQSQPS ASTSR+ CTSRLP+ELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSL+IESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 7.3e-45
Identity = 107/119 (89.92%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLVNADDSSLLYLLE 120
           SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQGMFCLS FLHL LVNADDS LLY+LE
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNADDSPLLYVLE 119

[Close]

BLAST of ClCG11G002390 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34
Identity = 88/95 (92.63%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSLAPKFNKRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. ExPASy TrEMBL
Match: A0A1S3C7U8 (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.8e-33
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 8.4e-33
Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSELSPFKS CQSQPS ASTSR+ CTSRLP+ELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSL+PLHSAIAAARLISSL+IESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGI 95

[Close]

BLAST of ClCG11G002390 vs. ExPASy TrEMBL
Match: A0A1S3C7Z3 (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 86/98 (87.76%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGMFCL 99
          SQGSL+PLHSAIAAARLISSLTIESQ WGLVPQ M  +
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI 98

[Close]

BLAST of ClCG11G002390 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRS--SSSELSPFKSTCQSQPSTASTSRLPCTSRLPVE 60
           MAS   + RLSS++ SL  K +K +   SS  SP KS   S PS+A TSR+  + RLPVE
Sbjct: 1   MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61  LSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLH 104
           LS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG    S++L+
Sbjct: 61  LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQSFSSLWLY 101

[Close]

BLAST of ClCG11G002390 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-15
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRS--SSSELSPFKSTCQSQPSTASTSRLPCTSRLPVE 60
          MAS   + RLSS++ SL  K +K +   SS  SP KS   S PS+A TSR+  + RLPVE
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61 LSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          LS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG+
Sbjct: 61 LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGI 93

[Close]

BLAST of ClCG11G002390 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 6.0e-15
Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKF-NKRSSSSEL-SPFKSTCQSQPSTASTSRLPCTSRLPVE 60
          MAS + + R SSRL+SL     NK ++ S L SP KS   + PS+A++ RL  +SRLPVE
Sbjct: 1  MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKS---ASPSSATSCRLNRSSRLPVE 60

Query: 61 LSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          LS   S+IPLHSAIA++RL+SSL++ES+ WGLVPQG+
Sbjct: 61 LS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGL 91

[Close]

BLAST of ClCG11G002390 vs. TAIR 10
Match: AT1G70350.1 (unknown protein; Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 0


Query: 39  SQPSTASTSRLPCTSRLPVELSSQGSLIPLHSAIAAARLISSLTIESQRWGLVPQG 95
           S  ST  + R    SR+PVELS+  SLIPLHS  A+A L S L++ +Q W  + +G
Sbjct: 45  SSSSTRPSLRRLTFSRVPVELSAGISLIPLHSVTASALLTSLLSLSNQNWSCLSEG 100

[Close]

BLAST of ClCG11G002390 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 2  ASLKAVSR-LSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 61
          ++L A SR L SR +++  K      ++  SPF S  QS         +P  SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQS---------IPRASRVLSALG 66

Query: 62 SQGSLIPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          S  ++IPLHSA+A+ARL SS+  +S  W L+ QG+
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQGL 92

The following BLAST results are available for this feature:

BLAST of ClCG11G002390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061549.1	1.5e-44	89.92	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protei...	[more]
XP_038889658.1	1.7e-35	93.68	uncharacterized protein LOC120079520 [Benincasa hispida]	[more]
XP_004139345.1	4.1e-34	92.63	uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical ...	[more]
XP_008458440.1	7.8e-33	90.53	PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]	[more]
XP_023547330.1	1.3e-32	87.37	uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331....	[more]

BLAST of ClCG11G002390 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G002390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7B3	7.3e-45	89.92	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LKT5	2.0e-34	92.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1	[more]
A0A1S3C7U8	3.8e-33	90.53	uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G399	8.4e-33	87.37	uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A1S3C7Z3	1.4e-32	87.76	uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of ClCG11G002390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55205.2	2.1e-15	54.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55205.1	4.6e-15	56.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13674.1	6.0e-15	55.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G70350.1	1.3e-04	46.43	unknown protein; Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bac...	[more]
AT4G39300.1	1.6e-04	37.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..49
None	No IPR available	PANTHER	PTHR33156:SF43	BNAANNG28360D PROTEIN	coord: 1..96
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G002390.2	ClCG11G002390.2	mRNA