ClCG11G001320 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G001320
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	DEAD-box ATP-dependent RNA helicase
Location	CG_Chr11: 1570377 .. 1587822 (+)
RNA-Seq Expression	ClCG11G001320
Synteny	ClCG11G001320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCGTCGGCCGAAAAACACAAAATATCGGCCTCCTTTTTCCACGTCGCGAGCCCCATCTTCCCTACTATCTCTCACTCTCTCTCCCCGTCCTCGTTCTGCCGCAGCCGCTCCACCGGCCCGCACCGCCGTCTTCCTCCTCCAGCTCTCACGTCAGCAGCCGCGCTGCCGCCTCTGCCATCGTCGTCAACCGCAGCAGGTTAAGTTGAGCTTCTGGGATGAGTAGCAGCATCAAATATATGAACGAAGGGATGAAAACAACAACGAAGAAAATGGTTAAAGAGGGTGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGGACTCTACTTTATGCGACCAACTCCGAGGTGTGTTATATGCCGACTTTATTCTCTTCCTTTACCACGTCTATAATCTACCTTCTGTTATGCTAATCGTTCTAGAATTTTACTTAGAGTTGTTGAGGATTTAGGATATCCGGTTAATTGCATTGATTCTAATCTTGGTCTGCATCTTCCGATGTGGGTTTTTCTTTCATCTGGACAGATAAAATGGGATTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCCAGGCGTCATGTGTATCCCTTTGAGGCTTTTTTATTTTTTACTTTTGGGTATGGAGATAACTGTTTTTTTCTCAGTGAAAGTTGTTGCGTCATCAATAAAATTTATGATAAGAAACTGATATTATATTGTAGAAAAATGCATACAAAATGGGGATGTCTGGGCATTGATTCTTCATCTTTATCACATGGAAATACATTGAATGGTGCATCTACCTTTTGATATTTGTAGTGCTTCTATAGGTTTTCTTAACCTCGCCATGTAGTCTTGTTAATGCGGCCACGGGCACTGGTAAAACAATTGCATATTTGGCTCCAATCATCCATCACTTGCAGAAGTCCAATCATAGGATTCAGCGCGCTGATGGAACTTTCGGTGCGTAACATTAGTAATTTATTTTTTCACGCTCAATTCTGCCTTTGCCTACTTATTTATCTCTCTTTATATATTTTTAATAGAAAACAAGAGCCTTCATTAAGAAACTAATAAACTAGAGACTAATGCCTCCCTTCTTAAAGGGGATCAAACAAAACCCTTTTATTCTAGTTTTTTCTCTAAGGACTTCTAATTAGACTACAAAATTATGGATTCCTTGTGCAACCACCAATTGAAGAGAATTTCATGTAACCAAGTTCATATATCATTAGGATAGGAGCGGACCAAACGAACTAGAAGAACCTAACATGCAAGTTCCATCCCTCTACCATCCAATGATAGATTGGGTCTTGAGAGGAAGGTAATAAAGCAAGATTGGTTTCATTCTTCTCCCTCATTTACGATTACCTTGGGGGGAGACACACCATCAGAAGCCAAGTACGCAGATGATTAGTTTTAGGGATGCACTTCAACCAAAGAATCTTCTAGTAGCCATTAGCAACCACTCCACTTAGTTACCTCTCAACCCAAGAATCCTCTGATAGCCATGGAAAACCTCTCCGTCCTAGTTACTTGCTCTGCCACCATGACTGGCTGGAACGAGCGACTTGTTGTCCAACAATGCTACCAATGTGGTACATGGCCAAGCATCGAGGAATCAATGCTCTCCAATGTCTCCAAGTGTTGCCCTATTAATCCTTTTCTTAGGATGATAAAGCCGTAATCCATGTTTATGATCATACAATTGCTACCAACCTCAACCTATGATTGGAAATTATCAATTGAAGTTCTATAAACTAACCATCGAGTTTTACTATCAAGACAACAAGAAATTTTCTTTTGGGGGCTGGATTGACATTCTATCTCTTCCCCCCATTATTTGGACAGAAGAAATTTTCCATTTCATTAGAAACCAATGTGGAGGTTTCATAGACTCCAATCACATGGATAGATGGATAAATTTATTAGCTGCTCGCTCGAGATATCACAAGAATTCCTCGGGCTTCATATCGCCACTAATATGGCTTCATCATCCCTCAATAGCGATGACTATACCGTTCAGATTCGTGGGATTTCCAATAGTTCAATCAATGAGGAGAAGATTGAGAAAGTCACACCAATCCAGGGATCCCCCATTTTGAAAAGGATAGAGGAGTTTATGCCAATTATGAGATCTCCCATTTTGGAATAAAGGGAAAGAGAAATGGCTTCATATCGCCACTAATATGGCTTCATCATCCCTCAATGGCGATGACTATACCGTTCAGATTCGTGGGATTTCCAATAGTTCAATCAATGAGGAGAAGATTGAGAAAATCACACCAATCCAGGGATCCCCCATTTTGAAAAGGATAGAGGAGTTTATGCCAATTATGAGATCTCCCATTTTGGAATAAAGGGAAAGAGAAATAGGTAACTAGTCCACCAATATCAGAATCTTTCATTTCTATGGATCCTCCCAATTTTCCCCTTATTCATCTAGTGACTTCCTCCAAAGGTCCTACCAAAGAATCATCTTTGAATGCCAAAGATCCTCCCTCTATTAATAAACCTTCCCGGTTTAAACCAACCAATGTATCCTTGTGGTTCCCACGCTCATAATAGAGTCGAAGGGTTCCACCACAGTTAGCAATTTGACTTTCTACCTCGGCATTTTGTGCCCAATTATGTCTTACCCTACCCCACCAGACAAGATCCCAGCCAAATGAGCCCGATCGTAACAAGCCCATCTTCAATGGTTTGCATGTCAGCAGCAGCAACATCTGAATCACGAGGGCTACTGAATCCACTGCTTTATTTTTGGTACCAACAATTAAGAATTGTTTGCCCCTACTTGCTCTAAACTCAAACTTCCACTTACTCGCTTGGAGAAAGACGAAAACAGAAATTCTGTGAGAAAACTGAATCTTGCCAAGGATAAGGATGCCTTATAACCCTCTACCCAAAATCATGATCCAAACCAAAAGGCTGACTCTGTTGGGGGGCTCTTAGACTTCCATAAGGCTTGAAAAATGACCTTATCTAACAGAGAAGAGGCAATTAAATATTTGGAAAGAGATTTGACAATGAACTTGCTTGAGGATTCCAAAAACCAAATCCTTGAATCAGGGGTTCGGGATAATCTCTTACCTTCCAAACTACATAACAGCTGCTGGAATTCTGAGATCTCCTCTTTTTTTAAAGGCTGGCGGAAAGATAAATTCCATGAGGAGGTTGCCGGATCCCTGTGGGCATTTACATTATCATTAGGGGTGGAGGCAACTCGAAATAATTGAGGAAAGGTTATCTTGAAGGGCTGATCTATGCACCAAGGGTCACTCCAAAAAGATATCTTCCTTCCATTTCCCAATTTGTATGCTGTAGAAGTGTTAAAAGTGTTAAAACTTTTCCAGATTTTTTAAATACTAATCCATGGGCCACTTAAACTCAAGCCATATTTTCCAGATGTGTGCCAATGATAAGTATCAACACTATGAATACTTTGCACAATTTTGCACCAAAATGCATCAAGCTCTTTCAAAAACCGCCAATTCCATTTGAAACACAATGCCAAGTTTCTGTTTTTCAGATTTCCTACCCCAAGATCACCATCTGATAAAGCTTTTGAAGCTATATCCCATTTCACTAGGTGATTCATCTTGCTGCCTTTTGTCCTTCCCATAAAAAATTACACATTATTTTTTCTAATTCAGCAATAATCAAGCTAGGCATTTGGAAGATGGACATGTAGTAAGTTGGAAGGTTTGCCAAAACAGCACTGCAAAGTGTTAATCGACCCCCTTGGGATAGATTGTATCTCTTCCAACAATCAAGCTTCAAATGAATTTTGTCTATCATAGGTTGCTAGATTGCATGTTTTTTTTTTGGATATTCCCCTAGAGGCCGCCCCAAATAGATGAATGGAAAGGTTCCAGCCTTACAACCTAAACGGCCAACATTAGAAAACAAATTAGACTCATCGATGTTGACTCCGTAAAGAGTTGATTTCTCCCAATTTACTTTCTCCACCGAGCATCATTCATAAAAGCCAACTGTTTCTATAAGCAAATCCAACATTGAATCATCATATTTGCAAAACAAAAGGGTATCATCTGTGAACTGTAAAATGGAAATGTGAACTTTTTTTTTCAATAAAGAACCCTTTAAACAGCCCCTTCTTGTGTATTTGTGAAATAAGGGTACTAAGGACCTCACTAATAATGAGGAATAAAAATGGTGAGAGTGGTTCCCCTTGACCTATTCCTGTAGAGGCTAAAATACAACTTTTAGGTCTTCCATTAATGTAAACTGAATATTTCGGATTACTGATGCAACCACTAATCCATTCTTCCCATTTTGGATGAAATCCCATAAGAGTAAGAATGCTTTCTAGAAAATTCCAATCTACTCTATCAAAGACTTTTTCCATATCCAATTTGAGTATCCATTCCTTTTTCTTTTTTGCCCGATAATCCTCTACTGCCTCGTTTGCTATGAGCAACAAATCAAGAATGTCTTCCTCCTATGAAAGCACTTTGAGAGTTGGAAATCAAGGATGGCATGACCTTCTTCAGTCTCTCTACTAGGACTTCAGTAATAATTTTATAGGAGGATGTAGTGAGGCTTATTGGCCGAAAATCTTTGACATGAAGGCAATCAACTTCCTTTGGAATGAGGCATATGAAATTTTCCTTGATTCAAGCATTAAGTTTCCATTCAAGTGGGATTCGTTGAACATTTTTTGAAAGATGTCCTTGAGCATATGCCAATATTCCAAGAAAAGTTCCACGGTAAATCCATTGGGTTGGGTGCTTTATTTTTGCCAAAAGCCTTTATAGCTTGTAGTGTTTCCTCACCTTGAAATGGTGTTGTGAGAAAGGTATTTTGAGGGGTTTTTACCTATTTCCAACTAATATTCGAGGGGATTGATCTTGGCCCTGGGCATTTCTTGTATAAAGAAGCAAAGAAGCTCAATATCTCTTCTTCTTTGGCCTGGAATGAGTGTATAGGAATTCCATCAGTTGTAAGCAATTTAGTAATCAAATTCTGCCTCTTTTTTGCTGAGAGAAAACGATGAAAGAAATCAGTGATTCTCATCCCCCAATTTCAGCCAATTCAACTTGCTTTTCTGAATTAAATTTCTTTCTTCCATAGAATATAAGTTCAAAAGATCTTCCTTAATCGCTAGCCAAATGTCTTCCTCCAAAGGTGGGAGAGCTTCCTGTTCAGCCTTCAAGTTGAAAAATTCCAGCTCAGAAATGAGGTCTTGTCCCATCCCTCCCCACAAAGTCAGCTCAACATTCCTCCCCTTCTCATCACTTCAAACAGTCAATCTTCCATATCCCCAATCACAAGACCAAATTCTTGTGAGCTACTAGGCATTCTTCTCCATTTTTTCAGTAGGAAAAAGAGTATGATTCCGACATCGATTCAATTGCAAGCTCTAGTAGTGAAGAACTAGAAAATTTGGAAGAAGAAGGTATCCAAGACTCCTCAGATCAAGTAGTTAATTTCTCAGAGGAGCTGATTTCTCTATTCCAGTTAGAAGAAAAGAGTCAAGCAAAGGAAAAAGGTTGGAGTTCTCATTTCAAGCCATTGCCTCTTTCGGAAATTCCCGAGCATTTAAAGTCCATAGTTGTAGATTGTGGACTTGTTTTGGCCTAATCCTTCTCTCCTCAATTCACGTTGGGTGTGTCTCTTGGCCTTCATAAATTCAAAGTACAGCATGGGGTTTTGGAATAGTATTTTTCAGTTCCAGATTTTTGAAGCAGGACTCTTCTCTAGCTGTGGTCATATTAGCATTGTATTGGTCTGGCAGTTTTTAGAGTTGATGTTTCTTCGAATTTGGTGCAGAGTTTTTGGTCTTTGTTTCCCAATTGTTTCTTATTGGATGTTTTGGTTCCTTCGGTCATGTACATCTTGGTTCCTTCGGTCATATACATTTTATTGGATGTTTTGGTTGTGTTGAGGGTGTCTTGTATTAATCTCCCATATTGTACTTTCAGATTATATCTCATTTCATTATATTAATGAAAGAGATTGTTTCCTTTTTTTTAAAAAATGAGGTCTTTCTCTTTTCTTTTCCTCTCTTTTGAGATCTAAAAACTAGGCTTTTGTGCTTTCCTTTACTTTGCTCAATTTTAGATTAATGACAAACCCAACCCAGCCACTTGATTGTTCTTCCTCCAGTGTTTTCTTGATGAGATTTGAGCAAGCAATATTCTACATCTAGCTGTTACAAAACTTGAATGGACTAGGGCCCCATTGGATCGATCCTGTCTCCATAACTTCAAGTTAACGCATAAAATCTCACAGAACTCCAAAATTAAAAATCTCCCCTCAAACTTACCAAAACTATAAATAGCTAAGTACAAAAAGAACGTATTTGGCTATTAACACACTTAAAGTTGGCTTAGATGCAACAACAAATCTGTGCAACATGTTTTTCTTTAATTTTTCTTATTGTCCTTTAGAGGGATTTGGAATGATGTTTTCGATGCTTTTATTTGGTCGGTTGTCCTACCATTTGATACACAGAGTTGGCTCAGATTGTTGATTTGTTACCACCCATTCAAAGCTTCAAAGGGATGTATTTGGTTAAGCATTATCAGTGCTGTTTTGTGGAAGATTTGGGACGAAAGAAATTCAAGAATTTTCCAAGAAAAATATAGACTGACAAAGGACATCATTGACACTTGTGTTCATTCTGCTCTTTTTGGTGTAATGACATACCAGCTATACATAGTCATAGCTTCTCCTTATTGCGAATTGGAAACATTTTTTGTATACCCTTTGATCAGAGCCTTTTGTGCCTTCAATATCTTTGGATATTTTATTCAATCAGTGAAATCGTTTCTTTTCCCCAAGGAAAAAAAAACACACTCAACTACTAACGTATAATTTTGACAAAACATACAAATTTTAAGGTCCCCTTGGTACTTCCATTATTCCATTTCTTTTTGTTATTATCTATATACCTTAACGGAAGGGGGCAATTTTTTTTAATGAGATAAACAAAACGTTAAACATTTAACCAGAAGGAAAGTAAGATGGGAGAAAAAAAAATATAAAGAAAATAGAGAAGTAATAGGTCATAGGTTGAAGTAGGGGAGAGAAAATGGAAGAGGTGATGAGGTGTAGATTAATGATAAGAGCATTTTTAATTTTTTTTAAAGGGTACTAATGCAACTTTTGAAAGTTTATATTTATGCAACGAGATATCAATGATTTTTGTTCATGTATTAAAAGTAAAGGCATTTTTAAACATTTCTTTTAGTTGAAGGGTATTTTTGAAACTTTTGAAAGTTCAAGGGTATTTTTGAAATAGAACACTAACGGTTTCCAAAACTAATGGTAAGGGTATGTTTGAACTTTTTGAAAGTTCAAAGGTATATTTAAAACTCTTTGAAAGTTCAAGGATATTTTTGATACAAAGTGCAAAGTTCAAGGGTATTTTGTATAAAACCTATAGAAAAATTACATAGGGGTACCAATTATCATATGTTGAAAGAAAAGGCGGAAAACATAAATTGAATTACAAAACCCTTAACCAAACATGAGAAAGCAAGCAAAAAAATAATTTTATTCATTGCTAGTGTTCAACTCTCTCTCACTAACACATATACTGGATAACACTCATGTATATTTGAGTCTAACGAATTCTTTTGGCCATAGCGTTGGTTCTTGTACCAACACGAGAACTATGCATGCAGGTCTACGAAAGTCTACAAAAACTAATGCAACGTTATCATTGGATTGTACCTGGTTACATCACAGGTGGGGAAAGCCGATCTAAGGAGAAAGCGAGGTTGCGGAAAGGTAGGAGACTAAGTTTAAGTTATGGAATTACCATTTCATTTTGATGTATGGTAGCTTTATTATGAGACAATGTGTATGAGTTTGTTAGTCCCTTTTTTTAAAAAAAAAACATTTCATTTATAAAATTTATAAATGAAGTTTTAACCTAATGACTTCATTGCTATAATTGTAGTAATTGTTGCCGATAATTAAGGGTGCAAAATGATTTTTCGGTTTAGTTAGTTTGTTGTTTGGTTTAGTTTGGTTTGGTTTATTTTGGTTTGGTTTATTTTAAATACCATTTTAGTCTCTATACTTTGAATCTCATTCCATTTTATTCTTTGTGCTTTTAATGTCCATATTTAACCTATCTACTCAATGAATCTTAAAATTAGTCTTTATTGTTAGTATTAAGTTTAGTAAGATAAGATAATGAAGTTCATGTTTATCAAACTTTGATATCTTAATTTTTTTTTTGATGTTAATCTTAAGATATTGAAGTTTGATAAAGTTATTTCCAATATCTTATCTTATTGAAGTCAACTTTTATCAAATTTGGTAAATATTGATAACCTTACCCTTTTATGAAAATAAAAGATACAATGTGGATTTGTTTCCAAAATTTATAGAGTGAAGGATAATAGAGACGACATTTATAATAAATATTATTATTATATAGAGAAGTTAACAATAAACCAACAGTAGGAAAAGACTGTCTTTAATTTTGATTTGGAAGGGGAAAAGTCAGAGTTCAGCTTTGATTTGAAAGAAAGAGAAGTTTTTGGAAGTTTTAACTCCAACACTCCCATTCCATTATTCAAGACAAAAAGCTTCTCCTAAATCCTCCAAGCTTCAAAGGATCGACAATGATAGAGTTGAAATTAGTTTTGCAAATGCTCATGTCTCAAGTTTATCCCCAACGCAGCTAGACTCTTCAAAAGTTGACCATTATTCTGCCAAACTCTTACATCTAATTCAGAAGGAGCACTCTCTGTCATTCTCCTCTTAAAAGTCCCTCATCTCCAATAGACTCAGATGCCGATTCAACAAGTGTGAGTAGTGAGGAAGATGGCTTTCATTCTCTGTCCCCGGTTCGAGATTCTCAATTTTGACAAGACCAATATGGGGAAGTATTGGAGAGTCTATTCCAAATTTCTGTAGAAAGGTCTATTGCTCAGCCAATCCAAGTAAGTTTCACCCCTCTGTCTCCTTCACAAATCCTTTCTAGCCTTCATTCAATAGTGGAAGTTTGTGGAATTCACTTGGGTCAAGTTTCTTCTCAGTTACCTCATTTGGTGAAGTTAAGGTCCTTTTTGCTGCTCTTCATCTTGAAAATATTTCGTGAAATTCAAGAGGGCTAGTGGTTTTTTCCTAATGATTTCAAATATAGAGAAAATCTGAGGTTTTTAGGGGTCATTGGTAGCATGATTATTCTCTTGGTAAAGTGGGGTTTTAAGAATTAAAAGACAGGATCTTGGCTTTGTTGGCAAAATGGGGCTGGAGTTCTATTTTTGAGGAGGAATCTTTAGTTGTGCAACGTGGTAAGAGTATTCACGGAAGCGATTCCTGCAATTGGCTTTCTCGGGTAATTTTGGATAAGTCTTCAAAGTCCTTGGATCAACATTTCTTGAGATTGGTTAATTAGATCATCTTGATTCTTTTCACTTGGCTATGGCAGCAGTATTTTGTTTCGGCAGGATTATTGGCTATATTCATCTTTTTAGAGTTCTCTGTTTCCAAGTTTACTCAGAATTGATTCTAATCCCAAAGATGAAGTGTGGGAATTCCTGCAGCTTGCCTCTCTAGTGGATCAAAGGGTGGTTGATAGTCGAGCCTCAAGTAGCTGGATCTTGGATTCTTCAGAATTCAAGCTGGCCAGGGAGAAATCAAGGTCTCCATTTGGGTCTTCTGGTTTTTTTTTTTTTTCCCTTTTCGTGCAGTTTTCTCAATTCAAGCCATTTGTCTAAGTTGGAATGTTTCCATCTACCCTCCTACTTTTAGTTAATTCTTTACATCAAGATGGGTTTTTTTTTTTTTTCTCTCCAAATAGTATTACTTTTTTTTCTAAAAAAAGGAAACGAGTCTCTTCATTAAAATAATGAAATGAGACTAATGTTCAAGTTACAAACAATGATACAAGAGCACATAACCAAAGGATCAGTGAGTACACTCGGACATCTCAACTAGGTTGACACCCCCTTAGCACTCTCATCATCTCCAACGAAATAAAATTTCCAAAGTCCAATAATCAATCCAATAGAACAAAATACTCCCCGAATACAATGGGGTAAAATACTGAAATTGAAGCAATACAAATCACAAACTCCTACAGAACAAAATGGAATGTCAAAATAAAATTATTGTTAATATAATCTTAAGCTGGAAAAATAAAAGCATGTCAATTCAGGCACAAATCTTGAATGGAGTATTCTTCAAAGGTATTGGATTTAATCATTGATTTTATCTGTGGTTCTGGTGCAACCAAGTTGTTTTCTTGTAGTTTGGCTCGTTTTGTGGCCTTTTCTGTTGGCCCAGGTATTCTTTCATTTCTTTTAAGTTTTTTCATTAAAGAAAGAAAATTAAAAAAAAGATACAACCTTCCCATTTCATGAACTGTTCTGATATGACTAACGTACCAAACTTTTTATGGTATGTGCTCAGGTATATCAATTTTAGTTGCAACACCAGGTCGGCTCTTGGATCACTTAAAGAATACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGGTATGTATGTTACTCTCTGCTTTGTGGTATGATGCATTCTGGATTAGTCCTTTTATTTTTCACTCTTAGACTTGAAACTCATGCATCTTTACAGAATTTTTGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGACCATTTGGGCTCAAGGAAGAAAATTGATAATGCAACTTCAAGTTTTGAATTTCCGCAGCAGAATTTGCTTTTTTCAGCCACCTTAAATGAAAAAGTAAATCGTTTTGCCAAAATTAGTTTAGAAAATCCCATTATGATTGGTCTTGATGGTGGAAACAATACCCTTGAATTTCAACCATCTGAACATGGTCGCTTTTCGGGACATGACATAAATGATGAAGGCCAATCCATAGGGAAGGAGAAGAGCTTTTCAATTTCAGATTATAAAATTCCAACTCAGTTAGTTCAGAGATATGTACAAGGTAATTTGATTAAAAGTTCCATTTAATGAACTTTCAAGTTTCACAATGTATTCATGAGTGCAAAGGGTTGGATTCATGTTGCTTGGACATTGAATTAATATCCAGTGGATCGCTTTGTACTTCTGTGTCAAATTTTCCTTTAGGTCACTTAAAACTGTGGTGCTTCCTTGTAGATCTTTGAGTTTTTGTTTCATTTGCCCCTTTGTTGTCTCAGGCGGTTTTGTTTTAATGTAGCAAATTAGTAATTGTTTTGTACTTTTTATTTAAATGGTTAGATTCTTCTTATTCCAATGTTCGGTTGTATAATGTTTGGTCCTATTCTTCTTTTGTCCTATTCATACTGCATGTAACATGTTCACTTTTGTGATTAATTTTTTTGTGCAGCACCTTGTGGTTCGCGTTTAGCTGTGCTTTTTTCTGTCCTGAAGTACTTGTTTGAGAGAGAATCCTTTGAGAAGGTAAAGACAAATCTATACTTGTGTCTAAATGGAAGTTTTAGTGTTATCACTCTTAAAAAAAGGTTTTAGCTTCATCATGTGCTGCGCAGTTATAGAATAAAGCACGCAAATGCAATAAAAATAATGTAGCTCTCTACTCTCATGTCACTCTATCTTCATACTTTCTATTGCATCCTCTAAGAAGAGTTGTGAGGATATTTGGAGAGGAAAATTGCGTAGGAAGGTAAGGATATATTCTTACTTCTTCCCCTGGCTCAAGACTCGAGAGCTTCCACGAAGAAAACATTCAAAGAAGCCTTTTCGCTTATGATCTACATCTTGAAAATCATGACCCCCATCGTACCCCTCCTCTCCATCACCTAGCTCTCTGGTGACCACCCACTGCCAACGCTGATCATGAGTTGGTCACCCATTTCACCCCTCCCTTCTCTCCCCTCCCAATCCCACATTGTCCATTGATGGAATTCACAACTTCCGTATCACAAAAGCTACTTGGGACCGATCTTCCACCCTCACCCTAAAGCAAGCATCTCACCCTTGGCCGACCACTTGTCTCACTCACCTTCTTGAGGTCCCATTAAACAAGAAGTTTTTTAAGGAATGTCATCTTTGTGAAAATGTGATTTGGGTGGAGAAAATCACAAATCTCAAGGTCATTGTGTTGAAATAGTAAAGCTCTGAGTGAATGGTGGTTTAAATAAAGCTCGTATCCCCCGGCTCATAGGCTTCAATGCTTTTTAGGTTTCATTGTAATTTGAGCATTAACCTCTTTCCATTCCATCAATGAAAAGTTTCTTTTAAAAAAAGTAATAATAACAATAAGCTCATTATCTCAACGTGAATAAATTTGGATGGAAAAATTCTCTCCTGGAAGGCCTCACCAACCTTCAATCCTCCACAATTAATGAAAAAAAGACCCTACAGAAATGCTCTCTAGATGAATCTTGTCACTATTAAAGCAAAGAAAACCACTCAACTGAAGCCTCTTGGAAGACTGCACACCAAACAATCCTCAAACCTCTCTTGATCTAGTGGCTTTTTGCCTAAATATGTCATTCTTATCAATAGACAACATTTCTATGATAATTGGTTTGACATATTATGGGCTTTACAACAAGAATTAATTGACTTGGGCTAATGGAGCCCCTCTACAACCTGATAGAGCACTCCTAGTTGTTGCAAACTTGGAACGAGGTAGAGTCCTTTGTAACATTAAAGGATGGTACAATAGAAAAACCACCTCCTCATGTTGAAAACTTGGAATGAGGTCTTTGTAACATCAAAGGACGAGGTTTTTTTTTTTTTTTGGGAGGGATAGAATTGTAGGGAGGTTTGGGGAAATAATGGTTAATCTGGGTTCCATGGAATCCCTTTCAGTTTCATATTTGGATTCTAATTCACCTTCTCGATTGCTTTCAATTCTCTATAAATAGATGAACCCCCATGTATTCTTTACACCTTTCATTCTATTTAAGATTCTAGAGTTAATTCTGGAAATATCTCCTTTTAGTCACTTAGGCTACACCATTAACTCTTTGTCCCTTTCAACCAAGCTCCAACGTGACCTTGAAATATAACATCATGTTTTGTCTGGTTGGTACTCGGTACCACAGAAAGGTGAAATTGCTTGGATAGATCAACTGGAAATTGCTTGAATTAATGCTTCCACCTTGTGTTCTCTTTCAAAGCAATATGTCAGCTTCTCCATCCAAGATTTAAGTTTAAATTGGAATGCCTTTGCTTTTCCAGCTTTGTTGTTATGTATTTGGCTTGCGTTTGTTATCTTTCCTTTTTGCCTATTTGCTTTGTTGTTTCTTTATATTTTGAGCATTAGTCTCTTTTCATTATTTCAATGAAAAATCTTCCTTTGGAAAAAAAGAAAAATAACTTTAGAGAACTTTTCCCTTTGTTTTTCTTTGTTGAGCGACAATCACCAACGGTTAGGGATGGCAATGAGGTGGGGCAAGGTCGGGGATGCACTCCCCTTTCCTACTCTATTCCTTGTTTTGGGGAGTCGAGATCAGGGTCGGGAATCCCCGTTATTTTTTTTTAATTTTTAATTATTTTGTATTTAAAATCAATTAAATTTTTTTATTTGTATTGAAATTGTAAATATTTTATGTACTAAGTTAGTATTATTGTTGTTTTATTTATTGAAAAAATATTTTAGCATTTTTTTATCATAAATGTAATACAAAAACTTAAGTTATTATGTTATGAAATTAAATTTTAAAAAAGTAAAAAAAATGAGACTAAAACAAACCGTAGCTTAGATACACACACACACACATACACACGTATGTGTATATATATATGTATAATGTTATTAATATACTAAAAAACAATAAAAAAAGTATTCGAGGCAGGGTCGAGGATGGTGCAGGGATCCCCTCCTTGTCCCTGATTGGGGCCCCGATTTAAATTCCTTGTTTGACCAACGTACCTCGTCAAACTGAAGATTCCCTACCCCCATTGTGTCGAGGACCCAACCCTCCGGGAAATTTTGCAATTCCTACTGACAGTTTTTTTACAATGGCAAGCTCCTTCACAGCAGTATGATGACTATGCTTTAAAAGAGTTAGTATTTTTATTTTAACACTATGACTACGCTTGCCAGAGGGTAACACAATTACTTAGGACCTGTTTGGTTAGGAATCTAAAAACAGAAATTTGAAAACAAGGGATTCAATGAAAATAGAATTGTATTTTATGTTTTCATATATGTGTTTGGTAGCAGATTCAAAAATTGGATTCTAATTTAAACAATTGTTTAAAATATGTTTGATACTATATTTATAAATCATAAAACTAGTTGTGGTTACTAAATATTAGTTGACAATGAATTATTGTTAAATTATTTATGAACACGTTTTAAGTTAAAAAGTTTTATATAATTATTATTTTGTAATGTTGTATAATTTATAATACATTACATAAGACATATTTTAATTTTTTTTAAAAATGAATTAAGTTTATAACATGACATACTATATTTCTAAACATTTTTATCTTTATTTAATATAATTTTGCATTTTAAAATTTATAATTCAAAATCTTGATACAATGAAAACATAAAGATGTTTTCAGAATTTTCATTGTTTGGAACACATAATCCAAAAACAGTTTTTAGAAACAGAGTTTGGGTTATCTACCAAACATATATTTGTTGAACTCAATGAATCTGAAAACATAAAACAGAACCCGGATTGCCAACACAGGCCCTTAGTTACTTCTCATTTCTGTGAACTATTGTTATTAACTTTTCTTCTTTTATGACTTTGTTATCAACTCGTTTACAGATTTTGGTACTCTTTTCAACATGTGATGCTGTAGATTTTCACTACTCCCTGTTTGGTGAATTCAAATTCTCCTCTTCAGAATCAGAATCGAGGCCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGTATGAAGCCAGAAGATCGTAGAACAACATTTCAGGCCTTCAAAACAGAGAAGCTGGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGTTTAGATTTTCCAAAAGTTAGATGTATTATTCAGTATGATCCTCCAGGAGAAGCAATTGAGTATGTGCATAGGTAACCACACTTACTTTTTTAGAAAGAAAAGGCTCTCTTTATTATATGTTTTTGTTGGTACTCTTCTTCTGTATTTTTAGTATGACGCAGTTAGTATTTCCACTCTTTTCTGTGTTTAGTATTTGATATGAAATATTGTGATAGCTTCACAGTTTTAAGTATCGATGGTCAGAACAGTGATGATGTCTTTACTCACTGGCATCTTTTGTATTCCTTGGATCCTTTTAGTTCCACTGGAATCCTATTGGAGCTTGTGGATTATTTCATTGGAGGATTCTATTTAAGCTGATTTGGTGGGATTTGTTTAAATGTTATTTATTTTACTGATACCTATGTAATGTTATCTTGGAGGATCCTTAAATTATTTCCTACAAATTATGCAGTAAGTTGGTATTGGTAGAGTGCTGGTGTAGCTATGATACTTCACCGGCAGGGTGATGACAAAATTCCTAATTGGTCGGCTTCTGGGGCTTGCTTTGGCAACTACTCAAGTCCAATTGATCTAGCATTTAATATTCGACTCCTAACTGGTTGGCTTCCTGATGCAGGGTTGGAAGAACTGCTCGCTTAGGTGAAAGAGGAGATTCATTGTTATTCCTACAGCCAACTGAAACAGATTATTTGCAAGATTTGCAGAACCATGGTGTATCTCTTGCTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCAGTTCGTGGAAGGAAGCAATTTGTAGAGAATTTTGTCTCTCTAGAGTCACATTCCTGGATCATGTGCTTGCAGAGGGCTGTCGAATCGTTCATTGCAGCTGAGGTATAGTCTTTTCGCCACCCCTTTTTCTCTCTTTTGATCTAATTAATAGTTTCGGAGCATAGGGAGCCATCTAGACAGGTCCTTCCATTTCATTATTATGAATGACATGTTACGTTGTCTTTGCCTGGGGGAGTTTTTTCTTTTCTTTTCCTTTTTTTAACAATTTTTTTTTTTTTTTGGTAAGAATTCTGTGCATTGTTGTAATCATGATTCGTGATTAACACATCTATTTTCATGGAAATAAATTTTGTTGTTATTTGCTTCAAAGGTTTTTCACTTGTAGGTTTGTTCTAGAATCTAGAATGAGTCAAATGACTTGATTTTTGGGGGGAATGATCTTTCATTATGGTTCTGTATGTGTCAAGAATGAGTAGAAGTGGAATTAGCCTTTCCAGTCCCTTTGTTGTTATTGTTTATGGCAAAACATTGAGCATTCTTAACTTGCTGGTTCTACCTCCAAAATCAAGACTTTAGGAATTTTTTTTTCAGGTATGGCTGCTCATTTTGATTTTGGTTGCATTAGAATCTTGATACTTATACCCTAACAGAAAGTGGGAGTCTTGAACTAAGAAAATGTAACCTAACAAAGAGTTGGAATCTTGAACTAAGAAAATGTAAATTTACATTTAATAGTAAATACTTAATGGACAAAAATTGTTAAAACCACGTAACTATACGTTAATGTAAATTGGAGCATAACATATGGTTGATATTTTTAGTTTTCTGTAAAAATTGTATCAAATTTCCCAAGGATGTCGTGACTCGTGAGTGAATGCAACATGCGTGGACTAAAATTTTTTGTCCCTTGTTCAGAGCTATTTCCTACCATCTCACTTCATATTGTCTGGCTTATGCCAAAAATGACTCACAATCCCACCAGATTTTGTTGAGTATTAAACTTCCTCCCATTCCTTTAGTTTTCCCCCTCCCCTCAATTCAAGGTGAGGGAGTGTATGGTTGAAAAAGTTTGACCTCTTAGTCGAGGACAGATGCCTTAATCAGTTGAGCTATGCTCATATCAATTCTTTCAATCTATTTGTATTTTTATTTTTTTACTCTATTTATTTTTCTCTCATTGAGTGAATTGAATTCTAACATGGTAGCCACATAATGAGCTCAACATAAATCTTCTAGAACTCATAGAGATCATTTACTCTCCTTTCTTTGCATGATAGAATGTTATGTACTCATCAAACATTTTATTGATTTTGCTATTTCCAAGATTATTGAAATTCTAAGTAATGGACTTCCAAAAGGCACCTCCAGCGTTTCAAAAGACTAATTGATTTTTTTTTCAGCTTTTCCTTTTTTATTAAATTGTTTAGAAACAATGATGACGGCTACAATTATTAGTCCTGTTTTAGGTTTAAATTAATTTGTTTTCGTTGCTTTCATCAGCCAAGAATGATGAAGCTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTGGGGCATGTAGCAAAGAGTTTTGCATTGAAGCAGCAGCCATCTGTTGTTGGAAAATCATTCAAGAAACAGGTAAAGAAAAGGAAAAGAGATTCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAA

mRNA sequence

TTTCCGTCGGCCGAAAAACACAAAATATCGGCCTCCTTTTTCCACGTCGCGAGCCCCATCTTCCCTACTATCTCTCACTCTCTCTCCCCGTCCTCGTTCTGCCGCAGCCGCTCCACCGGCCCGCACCGCCGTCTTCCTCCTCCAGCTCTCACGTCAGCAGCCGCGCTGCCGCCTCTGCCATCGTCGTCAACCGCAGCAGGTTAAGTTGAGCTTCTGGGATGAGTAGCAGCATCAAATATATGAACGAAGGGATGAAAACAACAACGAAGAAAATGGTTAAAGAGGGTGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGGACTCTACTTTATGCGACCAACTCCGAGATAAAATGGGATTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCCAGGCGTCATGTTCTTGTTAATGCGGCCACGGGCACTGGTAAAACAATTGCATATTTGGCTCCAATCATCCATCACTTGCAGAAGTCCAATCATAGGATTCAGCGCGCTGATGGAACTTTCGCGTTGGTTCTTGTACCAACACGAGAACTATGCATGCAGGTCTACGAAAGTCTACAAAAACTAATGCAACGTTATCATTGGATTGTACCTGGTTACATCACAGGTGGGGAAAGCCGATCTAAGGAGAAAGCGAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACACCAGGTCGGCTCTTGGATCACTTAAAGAATACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTTGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGACCATTTGGGCTCAAGGAAGAAAATTGATAATGCAACTTCAAGTTTTGAATTTCCGCAGCAGAATTTGCTTTTTTCAGCCACCTTAAATGAAAAAGTAAATCGTTTTGCCAAAATTAGTTTAGAAAATCCCATTATGATTGGTCTTGATGGTGGAAACAATACCCTTGAATTTCAACCATCTGAACATGGTCGCTTTTCGGGACATGACATAAATGATGAAGGCCAATCCATAGGGAAGGAGAAGAGCTTTTCAATTTCAGATTATAAAATTCCAACTCAGTTAGTTCAGAGATATGTACAAGCACCTTGTGGTTCGCGTTTAGCTGTGCTTTTTTCTGTCCTGAAGTACTTGTTTGAGAGAGAATCCTTTGAGAAGATTTTGGTACTCTTTTCAACATGTGATGCTGTAGATTTTCACTACTCCCTGTTTGGTGAATTCAAATTCTCCTCTTCAGAATCAGAATCGAGGCCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGTATGAAGCCAGAAGATCGTAGAACAACATTTCAGGCCTTCAAAACAGAGAAGCTGGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGTTTAGATTTTCCAAAAGTTAGATGTATTATTCAGTATGATCCTCCAGGAGAAGCAATTGAGTATGTGCATAGGGTTGGAAGAACTGCTCGCTTAGGTGAAAGAGGAGATTCATTGTTATTCCTACAGCCAACTGAAACAGATTATTTGCAAGATTTGCAGAACCATGGTGTATCTCTTGCTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCAGTTCGTGGAAGGAAGCAATTTGTAGAGAATTTTGTCTCTCTAGAGTCACATTCCTGGATCATGTGCTTGCAGAGGGCTGTCGAATCGTTCATTGCAGCTGAGCCAAGAATGATGAAGCTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTGGGGCATGTAGCAAAGAGTTTTGCATTGAAGCAGCAGCCATCTGTTGTTGGAAAATCATTCAAGAAACAGGTAAAGAAAAGGAAAAGAGATTCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAA

Coding sequence (CDS)

ATGAGTAGCAGCATCAAATATATGAACGAAGGGATGAAAACAACAACGAAGAAAATGGTTAAAGAGGGTGAGATTTTTGCTTCTTGTACTTTCGCCAGCCTCGGTCTGGACTCTACTTTATGCGACCAACTCCGAGATAAAATGGGATTTGAAGTTCCTACGCTTGTACAGGCTCAAGCAATTCCGGCTATTTTATCCAGGCGTCATGTTCTTGTTAATGCGGCCACGGGCACTGGTAAAACAATTGCATATTTGGCTCCAATCATCCATCACTTGCAGAAGTCCAATCATAGGATTCAGCGCGCTGATGGAACTTTCGCGTTGGTTCTTGTACCAACACGAGAACTATGCATGCAGGTCTACGAAAGTCTACAAAAACTAATGCAACGTTATCATTGGATTGTACCTGGTTACATCACAGGTGGGGAAAGCCGATCTAAGGAGAAAGCGAGGTTGCGGAAAGGTATATCAATTTTAGTTGCAACACCAGGTCGGCTCTTGGATCACTTAAAGAATACATCATCCTTTTTGTACTCAAATTTGCATTGGATAGTGTTTGATGAGGCAGATAGAATTTTTGAATTAGGATGTGGCAAAGAAGTTGAGGAAATACTGGACCATTTGGGCTCAAGGAAGAAAATTGATAATGCAACTTCAAGTTTTGAATTTCCGCAGCAGAATTTGCTTTTTTCAGCCACCTTAAATGAAAAAGTAAATCGTTTTGCCAAAATTAGTTTAGAAAATCCCATTATGATTGGTCTTGATGGTGGAAACAATACCCTTGAATTTCAACCATCTGAACATGGTCGCTTTTCGGGACATGACATAAATGATGAAGGCCAATCCATAGGGAAGGAGAAGAGCTTTTCAATTTCAGATTATAAAATTCCAACTCAGTTAGTTCAGAGATATGTACAAGCACCTTGTGGTTCGCGTTTAGCTGTGCTTTTTTCTGTCCTGAAGTACTTGTTTGAGAGAGAATCCTTTGAGAAGATTTTGGTACTCTTTTCAACATGTGATGCTGTAGATTTTCACTACTCCCTGTTTGGTGAATTCAAATTCTCCTCTTCAGAATCAGAATCGAGGCCTGAACATTTGTTCCTTAAATGCAAGATTTTCCGGTTGCATGGGAGTATGAAGCCAGAAGATCGTAGAACAACATTTCAGGCCTTCAAAACAGAGAAGCTGGCTCTTCTTCTATCCACTGATATTGCTGCTAGGGGTTTAGATTTTCCAAAAGTTAGATGTATTATTCAGTATGATCCTCCAGGAGAAGCAATTGAGTATGTGCATAGGGTTGGAAGAACTGCTCGCTTAGGTGAAAGAGGAGATTCATTGTTATTCCTACAGCCAACTGAAACAGATTATTTGCAAGATTTGCAGAACCATGGTGTATCTCTTGCTGAATATCCTCTTGTCAAGGTGTTGGATAGTTTTCCAGTTCGTGGAAGGAAGCAATTTGTAGAGAATTTTGTCTCTCTAGAGTCACATTCCTGGATCATGTGCTTGCAGAGGGCTGTCGAATCGTTCATTGCAGCTGAGCCAAGAATGATGAAGCTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAACTTCATTTGGGGCATGTAGCAAAGAGTTTTGCATTGAAGCAGCAGCCATCTGTTGTTGGAAAATCATTCAAGAAACAGGTAAAGAAAAGGAAAAGAGATTCAAAGCAGGATGTCTCATCATCAAAAAAGAGGACTTTGTAA

Protein sequence

MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL

Homology

[Close]

BLAST of ClCG11G001320 vs. NCBI nr
Match: XP_008460014.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 555/597 (92.96%), Postives = 566/597 (94.81%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           MSSSI+Y+NEG+KTT KKMVKEGEIFASCTFASLGLD TLCDQLRDKMGFEVPTLVQAQA
Sbjct: 1   MSSSIEYINEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           IPAILSRRHVLVNAATGTGKT+AYL PIIHHLQKS  R QRADGTFALVLVPTRELCMQV
Sbjct: 61  IPAILSRRHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTFALVLVPTRELCMQV 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
           YESLQKL+QRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 YESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSR+ I    DNA SSF FPQQNLLFSATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
           KV  FAKISLENPIMIGLD G++ LEFQPSE GRF G DINDE Q I KEKSFSI+DYKI
Sbjct: 241 KVIHFAKISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360
           PTQLVQ YVQAPCGSRL VLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS
Sbjct: 301 PTQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360

Query: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420
           SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC
Sbjct: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420

Query: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL 480
           IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSL EYPLVKVL
Sbjct: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVL 480

Query: 481 DSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHR 540
           DSFP RGRKQFVE  VSLESHSWIM LQRAVESF+AAEP MMKLAQKAFCSWVRAYTAHR
Sbjct: 481 DSFPARGRKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHR 540

Query: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDS+QDVSSSKKRTL
Sbjct: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 597

[Close]

BLAST of ClCG11G001320 vs. NCBI nr
Match: XP_004141076.1 (DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus] >KGN60526.2 hypothetical protein Csa_019328 [Cucumis sativus])

HSP 1 Score: 1082.8 bits (2799), Expect = 0.0e+00
Identity = 554/597 (92.80%), Postives = 563/597 (94.30%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           MSSSIKY NEG+KTTTKKMVKEGE+FASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA
Sbjct: 1   MSSSIKYTNEGVKTTTKKMVKEGEVFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           IPAILSRRHVLVNAATGTGKT+AYL PIIHHLQKS  R QRADGTFALVLVPTRELCMQV
Sbjct: 61  IPAILSRRHVLVNAATGTGKTVAYLVPIIHHLQKSARRTQRADGTFALVLVPTRELCMQV 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
           YESLQKL+QRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 YESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSRK I    DNA SSF FPQQNLLFSATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQQNLLFSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
           KV  FAKISLENPIMIGLD GN+ LEFQP+E GRF  HDINDE   I KE +FSI+DYKI
Sbjct: 241 KVTHFAKISLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIADYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360
           P+QLVQ YVQAPCGSRL VLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFG FKF S
Sbjct: 301 PSQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGGFKF-S 360

Query: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420
           SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC
Sbjct: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420

Query: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL 480
           IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSL EYPLVKVL
Sbjct: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVL 480

Query: 481 DSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHR 540
           DSFPVRGRKQFVE  VSLESHSWIM LQRAVESFIAAEP MMKLAQKAFCSWVRAYTAHR
Sbjct: 481 DSFPVRGRKQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHR 540

Query: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           G LKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL
Sbjct: 541 GALKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 596

[Close]

BLAST of ClCG11G001320 vs. NCBI nr
Match: XP_022946513.1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita moschata] >XP_023546293.1 DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1057.0 bits (2732), Expect = 6.1e-305
Identity = 539/589 (91.51%), Postives = 551/589 (93.55%), Query Frame = 0


Query: 8   MNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67
           MNEGMKTTTKKMVKE EIFASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 68  RHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKL 127
           RHVLVNAATGTGKT+AYL PIIHHLQKS+ RIQRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 128 MQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187
           + RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 188 EADRIFELGCGKEVEEILDHLGSRKKI---DNATSSFEFPQQNLLFSATLNEKVNRFAKI 247
           EADRIFELGCGKEVEEILDHLGSRK I   DN TSSFEFPQQNLLFSATLNEKVN FAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 248 SLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRY 307
           SLENPIMIGLD GNN LEFQPSEHGRF GHDINDE Q   KEK+  I+DYKIPTQLVQ Y
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQSY 300

Query: 308 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE 367
           VQAPC SRLAVLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R E
Sbjct: 301 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 360

Query: 368 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 427
           HLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 361 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 420

Query: 428 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGR 487
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSL EYPLVKVLDSFPVRGR
Sbjct: 421 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 480

Query: 488 KQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFV 547
           K FVE FVSLESHSWIM LQRAVESFIAAEP MMKLAQKAFCSWVRAYTAHRGELKRIFV
Sbjct: 481 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 540

Query: 548 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 541 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 588

[Close]

BLAST of ClCG11G001320 vs. NCBI nr
Match: XP_022975310.1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1043.9 bits (2698), Expect = 5.3e-301
Identity = 534/589 (90.66%), Postives = 545/589 (92.53%), Query Frame = 0


Query: 8   MNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67
           MNE MKTTTKKMVKE EIFASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 1   MNEVMKTTTKKMVKEDEIFASCTFASLGLHTTLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 68  RHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKL 127
           RHVLVNAATGTGKT+AYL PIIHHLQKS+ RIQRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 128 MQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187
           + RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 188 EADRIFELGCGKEVEEILDHLGSRKKI---DNATSSFEFPQQNLLFSATLNEKVNRFAKI 247
           EADRIFELGCGKEVEEILDHLGS K I   DN TSSFEFPQQNLLFSATLNEKV  FAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSGKNIVNKDNGTSSFEFPQQNLLFSATLNEKVICFAKI 240

Query: 248 SLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRY 307
           SLENPIMIGLDGGNN LEFQPSEHGRF GHDINDE Q   KEK   I+DYKIPTQLVQ Y
Sbjct: 241 SLENPIMIGLDGGNNALEFQPSEHGRFLGHDINDEAQPTRKEKKL-IADYKIPTQLVQSY 300

Query: 308 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE 367
           VQAPC SRLAVLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R E
Sbjct: 301 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 360

Query: 368 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 427
           HLFL CKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 361 HLFLNCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 420

Query: 428 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGR 487
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSL EYPLVKVLDSFP RGR
Sbjct: 421 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPARGR 480

Query: 488 KQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFV 547
           K FVE FVSLESHSWIM LQRAVESFIAAEP MMKLAQKAFCSWVRAYTAHRGELKRIFV
Sbjct: 481 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 540

Query: 548 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKR L
Sbjct: 541 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRNL 588

[Close]

BLAST of ClCG11G001320 vs. NCBI nr
Match: XP_022154763.1 (DEAD-box ATP-dependent RNA helicase 17 [Momordica charantia])

HSP 1 Score: 1011.5 bits (2614), Expect = 2.9e-291
Identity = 514/598 (85.95%), Postives = 543/598 (90.80%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           M+SS K+MNE +KTT KKM +E EIFASCTF+SLGL STLCDQL++KMGFEVPTLVQAQA
Sbjct: 1   MNSSTKFMNEEVKTTKKKMGRESEIFASCTFSSLGLHSTLCDQLQEKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           I AILS RHV+VNAATGTGKTIAYL PIIHHLQKS  RIQRADGTFALVLVPTRELCMQV
Sbjct: 61  IRAILSGRHVIVNAATGTGKTIAYLVPIIHHLQKSGRRIQRADGTFALVLVPTRELCMQV 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
           YE++QKL+ RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 YETIQKLIHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSRK I    ++A S+F+FP+QNLL SATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIYVNKEDAASNFDFPRQNLLLSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
            +NRFAKISLENPI+IGLDGGN+ LEFQP E GRF  HDI DE +  GK +SFSI DYKI
Sbjct: 241 NINRFAKISLENPIVIGLDGGNDALEFQPFERGRFLRHDITDEAEPTGKRESFSIGDYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFS- 360
           PTQLVQ YVQ PCGSRL VLFSVLKYLFE ESFEKILVLFSTCDAVDFHYSLFG+FK S 
Sbjct: 301 PTQLVQSYVQVPCGSRLPVLFSVLKYLFEGESFEKILVLFSTCDAVDFHYSLFGDFKLSP 360

Query: 361 SSESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVR 420
           S ESE R + +FLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFPKVR
Sbjct: 361 SPESEMRLKQMFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPKVR 420

Query: 421 CIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKV 480
           CIIQYDPPGEAIEYVHRVGRTARLGE+GDSLLFLQPTE DYLQDLQNHGV L EYPLVKV
Sbjct: 421 CIIQYDPPGEAIEYVHRVGRTARLGEKGDSLLFLQPTEIDYLQDLQNHGVCLTEYPLVKV 480

Query: 481 LDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAH 540
           LDSFPV GRKQ VE FV LESH WIM LQ+AVESF+ AEP MMKLAQKAFCSWV AYTAH
Sbjct: 481 LDSFPVHGRKQSVEKFVPLESHFWIMFLQKAVESFVVAEPEMMKLAQKAFCSWVCAYTAH 540

Query: 541 RGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           RGELKRIFVVKKLHLGHVAKSFALKQQPS VGKSFKKQVKKRKR+ KQDVSSSKKRTL
Sbjct: 541 RGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRNPKQDVSSSKKRTL 598

[Close]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot
Match: Q7XJN0 (DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 1.7e-204
Identity = 362/573 (63.18%), Postives = 441/573 (76.96%), Query Frame = 0


Query: 25  IFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAATGTGKTIAY 84
           +FASC+F+SLGLD+ L DQL+++MGFE PTLVQAQAIP ILS R VLVNA TGTGKTIAY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 85  LAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVPGYITGGES 144
           LAP+IHHLQ  + ++ R+ GTFALV+VPTRELC+QVYE+L+KL+ R+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 145 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 204
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 205 LDHLGSRKKIDNATSSF---EFPQQNLLFSATLNEKVNRFAKISLENPIMIGLDGGNNTL 264
           +  LGS +               +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 265 EFQPS-EHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVLFSVL 324
           +   S E       D  D    + K  +    DY IP+QLVQRY++ PCG+RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 325 KYLFERESFEKILVLFSTCDAVDFHYSLFGEFKF--SSSESESRPEHLFLKCKIFRLHGS 384
           K LFERE+ +K++V FST DAVDFHYSL  EF++  +S   E   + LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 385 MKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAIEYVHRVGRTAR 444
           M+ EDRR+ F  FKTEK A+LLSTD+AARGLDFPKVRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 445 LGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGRKQFVENFVSLESHS 504
           +GE+G++LLFLQP E DYL++L+ HG SL EYPL+KVLD FP+ G    ++  +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 505 WIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 564
           W++ LQRA+ES   AEP+M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 565 LKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKR 592
           L++QPS+VGKS  K+  KRKRD +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

[Close]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot
Match: Q0DLB9 (DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=RH17 PE=2 SV=2)

HSP 1 Score: 702.6 bits (1812), Expect = 3.8e-201
Identity = 349/588 (59.35%), Postives = 454/588 (77.21%), Query Frame = 0


Query: 11  GMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHV 70
           G     K+  KEG +FASC+F  LGL  TLC  L+DKMGF+ PT +QAQAIP  +S +H+
Sbjct: 6   GKSPVAKEEDKEG-LFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHM 65

Query: 71  LVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQR 130
           LV AATGTGKT+AYLAPI+H LQ    R++R DGTFALVLVPTRELC+QVY   Q+L+ R
Sbjct: 66  LVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHR 125

Query: 131 YHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEAD 190
           +HW+VPGYI GGE+R+KEKARLRKGISIL+ATPGRLLDHL++TSSF+Y N+ WIVFDEAD
Sbjct: 126 FHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEAD 185

Query: 191 RIFELGCGKEVEEILDHLGSRKKIDNATSSFEFP--QQNLLFSATLNEKVNRFAKISLEN 250
            I ELG GK +E+IL+HLGSR    N   +   P  +QNLL SATLNEKVNR AKISL+N
Sbjct: 186 SILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKN 245

Query: 251 PIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSF----SISDYKIPTQLVQRY 310
           P+MIGLD  N+      S HG+     ++D+ + I ++ +     ++ D+K+P QLVQRY
Sbjct: 246 PVMIGLDEQNS------SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRY 305

Query: 311 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSS-ESESRP 370
           V+  CGSRLA+L ++LK LFER+   K++V  STCD+VDFH+++  + ++S   + ++  
Sbjct: 306 VKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDK 365

Query: 371 EHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPP 430
           +  F+ CK+FRLHG+M  +DR+ +F  F +EK A+L+STD+AARGLDFPKV+CIIQYD P
Sbjct: 366 KQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSP 425

Query: 431 GEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRG 490
           GEA EYVHRVGRTAR+GE+G++LLFLQP ETDYL+DL+ HG SL EYPL KVLDSFPV G
Sbjct: 426 GEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNG 485

Query: 491 RKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIF 550
           ++      +SL+ H WIM LQRA+ESF+ +E    KLA+ AFCSWVRAYTAHRGELK+IF
Sbjct: 486 QRLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIF 545

Query: 551 VVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKR 592
           +VKKLHLGHVA+SF LK+QPS++G+S + Q+KKRK++ K++  + +++
Sbjct: 546 MVKKLHLGHVARSFGLKEQPSLLGRSHQVQLKKRKKEQKRERPAKRRK 586

[Close]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot
Match: Q9H8H2 (Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 SV=2)

HSP 1 Score: 382.5 bits (981), Expect = 8.7e-105
Identity = 228/589 (38.71%), Postives = 335/589 (56.88%), Query Frame = 0


Query: 18  KMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAATG 77
           K V+E ++F S  F  LGL   L   +   +     T VQ Q+IP +L  R  LV + TG
Sbjct: 220 KQVQE-KVFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTG 279

Query: 78  TGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVPG 137
           +GKT+AY  P++  LQ    +IQR+DG +ALVLVPTREL +Q ++++QKL++ + WIVPG
Sbjct: 280 SGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPG 339

Query: 138 YITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGC 197
            + GGE R  EKARLRKGI+IL++TPGRL+DH+K+T +  +S L W+VFDEADRI +LG 
Sbjct: 340 VLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGF 399

Query: 198 GKEVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKISLENPIMIG-LDG 257
            K++  IL          NA ++    +QN+L SATL E V R A ISL +P+ I  LD 
Sbjct: 400 EKDITVIL----------NAVNAECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLDK 459

Query: 258 GNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVL 317
            ++ L  +             D+           +  + IP  L Q     P   RL  L
Sbjct: 460 SHDQLNPKDKAVQEVCPPPAGDK-----------LDSFAIPESLKQHVTVVPSKLRLVCL 519

Query: 318 FSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE--HLFLKCKIFR 377
            + +    + E  +K++V FS+C+ V+FHYSLF +   SSS + +  +     ++ K  R
Sbjct: 520 AAFILQKCKFEEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 579

Query: 378 LHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAIEYVHRVG 437
           LHG M+ E+R   FQ F   +  +LL TD+AARGLD P+V  I+QY+ P    EY+HR+G
Sbjct: 580 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 639

Query: 438 RTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL------DSFPVRGRKQFV 497
           RTAR+G  G SLL L P+E +Y+  L +H ++++E  +  +L      D F  +G++   
Sbjct: 640 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCF--KGKRWGA 699

Query: 498 ENFVSL---ESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFVV 557
           +   ++   E       LQ   E ++ +  R +  A+KA  S+++AY  +  ELK IF V
Sbjct: 700 QKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHV 759

Query: 558 KKLHLGHVAKSFALKQQP----SVVGKSFKKQVKK----RKRDSKQDVS 587
           + LHLGHVAKSF L+  P    ++  K  K  VK+    +K  SK  ++
Sbjct: 760 RSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDLHKKTQSKHSLA 784

[Close]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot
Match: Q6NZQ2 (Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 2.4e-102
Identity = 228/589 (38.71%), Postives = 326/589 (55.35%), Query Frame = 0


Query: 12  MKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVL 71
           + +T  K  +E ++F+   F  L L   L   +   +     T VQ Q+IP +L  R  L
Sbjct: 87  LHSTVVKQARE-QVFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDAL 146

Query: 72  VNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRY 131
           V + TG+GKT+AY  P++  LQ    +IQR+DG +ALVLVPTREL +Q ++++QKL++ +
Sbjct: 147 VRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPF 206

Query: 132 HWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADR 191
            WIVPG + GGE R  EKARLRKGI+IL++TPGRL+DH+K+T +  ++ + W++ DEADR
Sbjct: 207 TWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFNRIRWLIVDEADR 266

Query: 192 IFELGCGKEVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKISLENPIM 251
           I +LG  K++  IL          NA ++    +QN+L SATL E V R   ISL NP+ 
Sbjct: 267 ILDLGFEKDITVIL----------NAVNAECQKRQNVLLSATLTEGVTRLVDISLHNPVS 326

Query: 252 IG-LDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCG 311
           I  LD   N    QP+                  +  S  ++ + IP  L Q  V  P  
Sbjct: 327 ISVLDKNCN----QPNPK----------------EVASIQLNSFAIPESLDQHVVLVPSK 386

Query: 312 SRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPEHL---F 371
            RL  L + +    + E  +K++V FS+C+ V+FHYSLF       S + +  EHL    
Sbjct: 387 LRLVCLAAFILQKCKFEKNQKMIVFFSSCELVEFHYSLFLHTLLCHSGTPT-SEHLPSAS 446

Query: 372 LKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAI 431
              K  RLHG+M+ E+R + F  F   +  +LL TD+A+RGLD P+V  I+QY  P    
Sbjct: 447 WPLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPA 506

Query: 432 EYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL------DSFPV 491
           EY+HR+GRTAR+G  G SLL L P+E +Y+  L +H +++ E  +  +L      D F  
Sbjct: 507 EYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKR 566

Query: 492 RGR-KQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELK 551
           R R  Q        E       LQ   E ++ +  RM+  A+KA  S++RAY  +  ELK
Sbjct: 567 RQRGAQKSRASGPQEIRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELK 626

Query: 552 RIFVVKKLHLGHVAKSFALKQQP------SVVGKSFKKQVKKRKRDSKQ 584
            IF V+ LHLGHVAKSF L+  P      +V   S K+   +RK   KQ
Sbjct: 627 SIFHVRALHLGHVAKSFGLRDAPRNLSVSAVKKASLKRPHPRRKTQRKQ 643

[Close]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot
Match: Q869P0 (Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 GN=ddx31 PE=3 SV=2)

HSP 1 Score: 368.6 bits (945), Expect = 1.3e-100
Identity = 231/657 (35.16%), Postives = 341/657 (51.90%), Query Frame = 0


Query: 20  VKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAATGTG 79
           V++ E F+S  + SL L  TL   L   M  E PT +Q  +I  IL     LV A TG+G
Sbjct: 198 VEKSETFSSMNWGSLQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSG 257

Query: 80  KTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVPGYI 139
           KT++YL P++  L  +  R+ R+DG + +++ PTREL  Q+YE LQKL++ ++WIVPG I
Sbjct: 258 KTLSYLIPVVQKL--TEQRVTRSDGCYCVIITPTRELSSQIYEELQKLLKPFYWIVPGII 317

Query: 140 TGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGK 199
            GGE+RS EKAR+RKGI+ILVATPGRLLDHL+NT SF   N+ W + DEAD++ +LG  K
Sbjct: 318 MGGENRSAEKARIRKGINILVATPGRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEK 377

Query: 200 EVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKISLENPIMIGLDGGNN 259
           +V  I++ L S+K+      + +F +QN+L SATL+E ++R A +SL +P+ IGLD  + 
Sbjct: 378 DVTTIINLLDSKKR------TMKFKRQNILVSATLSEGISRLASLSLTSPVYIGLD--SK 437

Query: 260 TLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVLFSV 319
            LE                E      EK       + P QL Q YV+     RL  L + 
Sbjct: 438 VLE--------------KGENPFQAAEKEM----LQAPKQLDQFYVEVESKERLTSLIAF 497

Query: 320 LKYLFERESFE-------------KILVLFSTCDAVDFHYSLFGEFKF------------ 379
           +++     + +             K++V FS+CD+VDFH+ +F   K             
Sbjct: 498 IRWKTSNITIDKGDVASGNSSANSKMIVFFSSCDSVDFHHYMFSNMKMDKERGVKRTKKE 557

Query: 380 ----------------------------------------SSSESESRPEHLFLK----- 439
                                                   ++S+SE+  E    K     
Sbjct: 558 QIKQDKLIQQHKQKNSKIFQTGNESDDEESDNDDSDDSDSNNSDSETDEEKEIEKQIKEA 617

Query: 440 --------------CKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVR 499
                           IF+LHG +  + R  TF  FK     +LL+TD++ARGLD P V 
Sbjct: 618 TSNPNYRVKTSVFSVPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPSVN 677

Query: 500 CIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKV 559
            I+QYDP  +  +Y+HR+GRTARLG +G SLLFL P+E  Y+  L    VS+ E  +  +
Sbjct: 678 WIVQYDPCSDTKDYIHRIGRTARLGNQGCSLLFLLPSEKKYIDHLAKFNVSVKEMKVTTI 737

Query: 560 LDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAH 593
           L S       Q  +   S +  S +  LQ   E F+  + +  ++A+ A+ S++R+Y  H
Sbjct: 738 LQSLFYTSDGQLKKTSKSSQLESQVHDLQLLFERFLIYDSKAKEMARCAYQSFLRSYATH 797

[Close]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL
Match: A0A1S3CB30 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498955 PE=3 SV=1)

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 555/597 (92.96%), Postives = 566/597 (94.81%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           MSSSI+Y+NEG+KTT KKMVKEGEIFASCTFASLGLD TLCDQLRDKMGFEVPTLVQAQA
Sbjct: 1   MSSSIEYINEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           IPAILSRRHVLVNAATGTGKT+AYL PIIHHLQKS  R QRADGTFALVLVPTRELCMQV
Sbjct: 61  IPAILSRRHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTFALVLVPTRELCMQV 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
           YESLQKL+QRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 YESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSR+ I    DNA SSF FPQQNLLFSATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
           KV  FAKISLENPIMIGLD G++ LEFQPSE GRF G DINDE Q I KEKSFSI+DYKI
Sbjct: 241 KVIHFAKISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360
           PTQLVQ YVQAPCGSRL VLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS
Sbjct: 301 PTQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360

Query: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420
           SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC
Sbjct: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420

Query: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL 480
           IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSL EYPLVKVL
Sbjct: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVL 480

Query: 481 DSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHR 540
           DSFP RGRKQFVE  VSLESHSWIM LQRAVESF+AAEP MMKLAQKAFCSWVRAYTAHR
Sbjct: 481 DSFPARGRKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHR 540

Query: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDS+QDVSSSKKRTL
Sbjct: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 597

[Close]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL
Match: A0A6J1G427 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450551 PE=3 SV=1)

HSP 1 Score: 1057.0 bits (2732), Expect = 2.9e-305
Identity = 539/589 (91.51%), Postives = 551/589 (93.55%), Query Frame = 0


Query: 8   MNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67
           MNEGMKTTTKKMVKE EIFASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 1   MNEGMKTTTKKMVKEDEIFASCTFASLGLHATLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 68  RHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKL 127
           RHVLVNAATGTGKT+AYL PIIHHLQKS+ RIQRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 128 MQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187
           + RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 188 EADRIFELGCGKEVEEILDHLGSRKKI---DNATSSFEFPQQNLLFSATLNEKVNRFAKI 247
           EADRIFELGCGKEVEEILDHLGSRK I   DN TSSFEFPQQNLLFSATLNEKVN FAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSRKNIVNKDNGTSSFEFPQQNLLFSATLNEKVNCFAKI 240

Query: 248 SLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRY 307
           SLENPIMIGLD GNN LEFQPSEHGRF GHDINDE Q   KEK+  I+DYKIPTQLVQ Y
Sbjct: 241 SLENPIMIGLDAGNNALEFQPSEHGRFLGHDINDEAQPTRKEKNL-IADYKIPTQLVQSY 300

Query: 308 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE 367
           VQAPC SRLAVLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R E
Sbjct: 301 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 360

Query: 368 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 427
           HLFLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 361 HLFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 420

Query: 428 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGR 487
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSL EYPLVKVLDSFPVRGR
Sbjct: 421 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPVRGR 480

Query: 488 KQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFV 547
           K FVE FVSLESHSWIM LQRAVESFIAAEP MMKLAQKAFCSWVRAYTAHRGELKRIFV
Sbjct: 481 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 540

Query: 548 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKRTL
Sbjct: 541 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRTL 588

[Close]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL
Match: A0A6J1IGD1 (DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474473 PE=3 SV=1)

HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 534/589 (90.66%), Postives = 545/589 (92.53%), Query Frame = 0


Query: 8   MNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSR 67
           MNE MKTTTKKMVKE EIFASCTFASLGL +TLCD+LRDKMGFEVPTLVQAQAIPAILS 
Sbjct: 1   MNEVMKTTTKKMVKEDEIFASCTFASLGLHTTLCDELRDKMGFEVPTLVQAQAIPAILSG 60

Query: 68  RHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKL 127
           RHVLVNAATGTGKT+AYL PIIHHLQKS+ RIQRADGTF+LVLVPTRELCMQVYE+LQKL
Sbjct: 61  RHVLVNAATGTGKTVAYLVPIIHHLQKSDRRIQRADGTFSLVLVPTRELCMQVYETLQKL 120

Query: 128 MQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 187
           + RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD
Sbjct: 121 LHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFD 180

Query: 188 EADRIFELGCGKEVEEILDHLGSRKKI---DNATSSFEFPQQNLLFSATLNEKVNRFAKI 247
           EADRIFELGCGKEVEEILDHLGS K I   DN TSSFEFPQQNLLFSATLNEKV  FAKI
Sbjct: 181 EADRIFELGCGKEVEEILDHLGSGKNIVNKDNGTSSFEFPQQNLLFSATLNEKVICFAKI 240

Query: 248 SLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRY 307
           SLENPIMIGLDGGNN LEFQPSEHGRF GHDINDE Q   KEK   I+DYKIPTQLVQ Y
Sbjct: 241 SLENPIMIGLDGGNNALEFQPSEHGRFLGHDINDEAQPTRKEKKL-IADYKIPTQLVQSY 300

Query: 308 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE 367
           VQAPC SRLAVLFSVLKYLFER+ FEK LVLFSTCDAVDFHYSLFG FKFSSSESE R E
Sbjct: 301 VQAPCASRLAVLFSVLKYLFERDCFEKTLVLFSTCDAVDFHYSLFGGFKFSSSESEPRSE 360

Query: 368 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 427
           HLFL CKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFP VRCIIQYDPPG
Sbjct: 361 HLFLNCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPNVRCIIQYDPPG 420

Query: 428 EAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGR 487
           EAIEYVHRVGRTARLGERGDSLLFLQPTE DYLQDL+NHGVSL EYPLVKVLDSFP RGR
Sbjct: 421 EAIEYVHRVGRTARLGERGDSLLFLQPTEIDYLQDLRNHGVSLTEYPLVKVLDSFPARGR 480

Query: 488 KQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFV 547
           K FVE FVSLESHSWIM LQRAVESFIAAEP MMKLAQKAFCSWVRAYTAHRGELKRIFV
Sbjct: 481 KHFVEKFVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGELKRIFV 540

Query: 548 VKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           VKKLHLGHVAKSFALKQQPSVVGKSFKKQ KKRKR  KQDVSSSKKR L
Sbjct: 541 VKKLHLGHVAKSFALKQQPSVVGKSFKKQEKKRKRYPKQDVSSSKKRNL 588

[Close]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL
Match: A0A6J1DL75 (DEAD-box ATP-dependent RNA helicase 17 OS=Momordica charantia OX=3673 GN=LOC111021936 PE=3 SV=1)

HSP 1 Score: 1011.5 bits (2614), Expect = 1.4e-291
Identity = 514/598 (85.95%), Postives = 543/598 (90.80%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           M+SS K+MNE +KTT KKM +E EIFASCTF+SLGL STLCDQL++KMGFEVPTLVQAQA
Sbjct: 1   MNSSTKFMNEEVKTTKKKMGRESEIFASCTFSSLGLHSTLCDQLQEKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           I AILS RHV+VNAATGTGKTIAYL PIIHHLQKS  RIQRADGTFALVLVPTRELCMQV
Sbjct: 61  IRAILSGRHVIVNAATGTGKTIAYLVPIIHHLQKSGRRIQRADGTFALVLVPTRELCMQV 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
           YE++QKL+ RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 YETIQKLIHRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSRK I    ++A S+F+FP+QNLL SATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKNIYVNKEDAASNFDFPRQNLLLSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
            +NRFAKISLENPI+IGLDGGN+ LEFQP E GRF  HDI DE +  GK +SFSI DYKI
Sbjct: 241 NINRFAKISLENPIVIGLDGGNDALEFQPFERGRFLRHDITDEAEPTGKRESFSIGDYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFS- 360
           PTQLVQ YVQ PCGSRL VLFSVLKYLFE ESFEKILVLFSTCDAVDFHYSLFG+FK S 
Sbjct: 301 PTQLVQSYVQVPCGSRLPVLFSVLKYLFEGESFEKILVLFSTCDAVDFHYSLFGDFKLSP 360

Query: 361 SSESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVR 420
           S ESE R + +FLKCKIFRLHGSMKPEDRRTTFQAFK+EKLALLLSTDIAARGLDFPKVR
Sbjct: 361 SPESEMRLKQMFLKCKIFRLHGSMKPEDRRTTFQAFKSEKLALLLSTDIAARGLDFPKVR 420

Query: 421 CIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKV 480
           CIIQYDPPGEAIEYVHRVGRTARLGE+GDSLLFLQPTE DYLQDLQNHGV L EYPLVKV
Sbjct: 421 CIIQYDPPGEAIEYVHRVGRTARLGEKGDSLLFLQPTEIDYLQDLQNHGVCLTEYPLVKV 480

Query: 481 LDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAH 540
           LDSFPV GRKQ VE FV LESH WIM LQ+AVESF+ AEP MMKLAQKAFCSWV AYTAH
Sbjct: 481 LDSFPVHGRKQSVEKFVPLESHFWIMFLQKAVESFVVAEPEMMKLAQKAFCSWVCAYTAH 540

Query: 541 RGELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           RGELKRIFVVKKLHLGHVAKSFALKQQPS VGKSFKKQVKKRKR+ KQDVSSSKKRTL
Sbjct: 541 RGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRNPKQDVSSSKKRTL 598

[Close]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL
Match: A0A1S3CCT2 (DEAD-box ATP-dependent RNA helicase 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498955 PE=3 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 9.5e-280
Identity = 508/597 (85.09%), Postives = 518/597 (86.77%), Query Frame = 0


Query: 1   MSSSIKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQA 60
           MSSSI+Y+NEG+KTT KKMVKEGEIFASCTFASLGLD TLCDQLRDKMGFEVPTLVQAQA
Sbjct: 1   MSSSIEYINEGVKTTAKKMVKEGEIFASCTFASLGLDPTLCDQLRDKMGFEVPTLVQAQA 60

Query: 61  IPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQV 120
           IPAILSRRHVLVNAATGTGKT+AYL PIIHHLQKS  R QRADGTF              
Sbjct: 61  IPAILSRRHVLVNAATGTGKTVAYLVPIIHHLQKSTRRTQRADGTF-------------- 120

Query: 121 YESLQKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSN 180
                                             GISILVATPGRLLDHLKNTSSFLYSN
Sbjct: 121 ----------------------------------GISILVATPGRLLDHLKNTSSFLYSN 180

Query: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRKKI----DNATSSFEFPQQNLLFSATLNE 240
           LHWIVFDEADRIFELGCGKEVEEILDHLGSR+ I    DNA SSF FPQQNLLFSATLNE
Sbjct: 181 LHWIVFDEADRIFELGCGKEVEEILDHLGSRRNIHVKKDNAISSFGFPQQNLLFSATLNE 240

Query: 241 KVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKI 300
           KV  FAKISLENPIMIGLD G++ LEFQPSE GRF G DINDE Q I KEKSFSI+DYKI
Sbjct: 241 KVIHFAKISLENPIMIGLDAGDSALEFQPSERGRFLGQDINDEVQPIRKEKSFSIADYKI 300

Query: 301 PTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360
           PTQLVQ YVQAPCGSRL VLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS
Sbjct: 301 PTQLVQSYVQAPCGSRLTVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSS 360

Query: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420
           SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC
Sbjct: 361 SESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRC 420

Query: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVL 480
           IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSL EYPLVKVL
Sbjct: 421 IIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVL 480

Query: 481 DSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHR 540
           DSFP RGRKQFVE  VSLESHSWIM LQRAVESF+AAEP MMKLAQKAFCSWVRAYTAHR
Sbjct: 481 DSFPARGRKQFVEKLVSLESHSWIMFLQRAVESFVAAEPGMMKLAQKAFCSWVRAYTAHR 540

Query: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKRTL 594
           GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDS+QDVSSSKKRTL
Sbjct: 541 GELKRIFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSRQDVSSSKKRTL 549

[Close]

BLAST of ClCG11G001320 vs. TAIR 10
Match: AT2G40700.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 713.8 bits (1841), Expect = 1.2e-205
Identity = 362/573 (63.18%), Postives = 441/573 (76.96%), Query Frame = 0


Query: 25  IFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAATGTGKTIAY 84
           +FASC+F+SLGLD+ L DQL+++MGFE PTLVQAQAIP ILS R VLVNA TGTGKTIAY
Sbjct: 25  LFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAY 84

Query: 85  LAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVPGYITGGES 144
           LAP+IHHLQ  + ++ R+ GTFALV+VPTRELC+QVYE+L+KL+ R+HWIVPGY+ GGE 
Sbjct: 85  LAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEK 144

Query: 145 RSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEI 204
           ++KEKARLRKGISIL+ATPGRLLDHLKNT+SF++ NL W++FDEAD I ELG GKE+E+I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204

Query: 205 LDHLGSRKKIDNATSSF---EFPQQNLLFSATLNEKVNRFAKISLENPIMIGLDGGNNTL 264
           +  LGS +               +QNLL SATLN+KVN  AK+SL++P+MIGLD  N  L
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLD--NTKL 264

Query: 265 EFQPS-EHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVLFSVL 324
           +   S E       D  D    + K  +    DY IP+QLVQRY++ PCG+RL  L SVL
Sbjct: 265 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 324

Query: 325 KYLFERESFEKILVLFSTCDAVDFHYSLFGEFKF--SSSESESRPEHLFLKCKIFRLHGS 384
           K LFERE+ +K++V FST DAVDFHYSL  EF++  +S   E   + LFLKCK FRLHGS
Sbjct: 325 KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGS 384

Query: 385 MKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAIEYVHRVGRTAR 444
           M+ EDRR+ F  FKTEK A+LLSTD+AARGLDFPKVRCIIQYD PGEA EYVHRVGRTAR
Sbjct: 385 MEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 444

Query: 445 LGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRGRKQFVENFVSLESHS 504
           +GE+G++LLFLQP E DYL++L+ HG SL EYPL+KVLD FP+ G    ++  +SLESH 
Sbjct: 445 IGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKFPIPGNMPRIKKVLSLESHP 504

Query: 505 WIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFA 564
           W++ LQRA+ES   AEP+M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFA
Sbjct: 505 WVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFA 564

Query: 565 LKQQPSVVGKSFKKQVKKRKRDSKQDVSSSKKR 592
           L++QPS+VGKS  K+  KRKRD +Q     KKR
Sbjct: 565 LREQPSLVGKSHHKETMKRKRDERQKGQQGKKR 595

[Close]

BLAST of ClCG11G001320 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 262.7 bits (670), Expect = 7.2e-70
Identity = 194/573 (33.86%), Postives = 283/573 (49.39%), Query Frame = 0


Query: 17  KKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRHVLVNAAT 76
           +K ++E  I  + TF SL L       +++ MGF   T +QA+AIP ++    VL  A T
Sbjct: 142 EKKLEETSIMTNKTFESLSLSDNTYKSIKE-MGFARMTQIQAKAIPPLMMGEDVLGAART 201

Query: 77  GTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESLQKLMQRYHWIVP 136
           G+GKT+A+L P +  L +   +    +GT  LV+ PTREL +Q Y   ++L+ +YH    
Sbjct: 202 GSGKTLAFLIPAVELLYRV--KFTPRNGTGVLVICPTRELAIQSYGVAKELL-KYHSQTV 261

Query: 137 GYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEADRIFELG 196
           G + GGE R  E   L KG+++LVATPGRLLDHL+NT+ F++ NL ++V DEADRI E  
Sbjct: 262 GKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQN 321

Query: 197 CGKEVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKISLENPIMIGLDG 256
             +++++IL+ L   +             Q  LFSAT + KV   A++SL +P+ I +D 
Sbjct: 322 FEEDLKKILNLLPKTR-------------QTSLFSATQSAKVEDLARVSLTSPVYIDVDE 381

Query: 257 GNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRYVQAPCGSRLAVL 316
           G                 ++ +EG                   L Q Y   P   RL  L
Sbjct: 382 GRK---------------EVTNEG-------------------LEQGYCVVPSAMRLLFL 441

Query: 317 FSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPEHLFLKCKIFRLH 376
            + LK     +  +KI+V FSTC +  FH  LF   KF   E                + 
Sbjct: 442 LTFLKRF---QGKKKIMVFFSTCKSTKFHAELFRYIKFDCLE----------------IR 501

Query: 377 GSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPGEAIEYVHRVGRT 436
           G +    R  TF  F   +  +LL T++AARGLDFP V  I+QYDPP    +Y+HRVGRT
Sbjct: 502 GGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRT 561

Query: 437 AR-LGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPL--VKVLDSFPVRGRKQFVENFVS 496
           AR  G +G +LL L P E  ++Q L+   + + E+     K+LD       K FVEN +S
Sbjct: 562 ARGEGAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKLLDV------KPFVENLIS 617

Query: 497 LESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHV 556
                         E++   E      A++A+ +++  Y +H   +K +F V +L+L  V
Sbjct: 622 --------------ENYALKES-----AKEAYKTYISGYDSH--SMKDVFNVHQLNLTEV 617

Query: 557 AKSFALKQQPSVVGK-------SFKKQVKKRKR 580
           A SF     P V  K       S ++ V K KR
Sbjct: 682 ATSFGFSDPPKVALKIDRGGYRSKREPVNKFKR 617

[Close]

BLAST of ClCG11G001320 vs. TAIR 10
Match: AT3G18600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 246.9 bits (629), Expect = 4.1e-65
Identity = 192/586 (32.76%), Postives = 282/586 (48.12%), Query Frame = 0


Query: 5   IKYMNEGMKTTTKKMVKEGEIFASCTFASLGLDSTLCDQLRDKMGFEVPTLVQAQAIPAI 64
           ++ M +G       +V +G I  + TF SL L       +++ MGF+  T +QA +I  +
Sbjct: 66  VEAMEDGEDEKNIVIVGKG-IMTNVTFDSLDLSEQTSIAIKE-MGFQYMTQIQAGSIQPL 125

Query: 65  LSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALVLVPTRELCMQVYESL 124
           L  + VL  A TG+GKT+A+L P +  L K   R    +GT  +V+ PTREL +Q     
Sbjct: 126 LEGKDVLGAARTGSGKTLAFLIPAVELLFK--ERFSPRNGTGVIVICPTRELAIQTKNVA 185

Query: 125 QKLMQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWI 184
           ++L+ ++H      + GG +R  E  R+  G ++++ATPGRLLDHL+NT +F+Y +L  +
Sbjct: 186 EELL-KHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCL 245

Query: 185 VFDEADRIFELGCGKEVEEILDHLGSRKKIDNATSSFEFPQQNLLFSATLNEKVNRFAKI 244
           V DEADRI E    +++ +IL  L   +             Q  LFSAT   KV   A++
Sbjct: 246 VIDEADRILEENFEEDMNKILKILPKTR-------------QTALFSATQTSKVKDLARV 305

Query: 245 SLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKSFSISDYKIPTQLVQRY 304
           SL +P+ + +D G                  + +EG                   L Q Y
Sbjct: 306 SLTSPVHVDVDDGR---------------RKVTNEG-------------------LEQGY 365

Query: 305 VQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSLFGEFKFSSSESESRPE 364
              P   RL +L S LK    +   +KI+V FSTC +V FH  +    K S  +      
Sbjct: 366 CVVPSKQRLILLISFLK----KNLNKKIMVFFSTCKSVQFHTEI---MKISDVD------ 425

Query: 365 HLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYDPPG 424
                  +  +HG M    R  TF  F   K  +LL TD+AARGLD P V  IIQYDPP 
Sbjct: 426 -------VSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPD 485

Query: 425 EAIEYVHRVGRTAR-LGERGDSLLFLQPTETDYLQDLQNHGVSLAEYPLVKVLDSFPVRG 484
           +  EY+HRVGRTAR  G +G +LL L P E  +++ L+   V + E              
Sbjct: 486 KPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIRYLKAAKVPVKEL------------- 545

Query: 485 RKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCSWVRAYTAHRGELKRIF 544
             +F E  +S         +Q A+E  +A +  + KLA+ A+ +++ AY +H   LK IF
Sbjct: 546 --EFNEKRLS--------NVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNSH--SLKDIF 554

Query: 545 VVKKLHLGHVAKSFALKQQPSV---VGKSFKKQVKKRKRDSKQDVS 587
            V +L L  VA+SF     P V   +     K  K RK+  +   S
Sbjct: 606 NVHRLDLLAVAESFCFSSPPKVNLNIESGAGKVRKARKQQGRNGFS 554

[Close]

BLAST of ClCG11G001320 vs. TAIR 10
Match: AT5G05450.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 6.7e-52
Identity = 147/518 (28.38%), Postives = 236/518 (45.56%), Query Frame = 0


Query: 50  FEVPTLVQAQAIPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGTFALV 109
           FE  T VQA  IP + S + V V+AATG+GKT+A++ P++  L++S     +      ++
Sbjct: 36  FEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVI 95

Query: 110 LVPTRELCMQVYESLQKLMQRYHWIVPGYITGG-ESRSKEKARLRKGISILVATPGRLLD 169
           + PTREL  Q+Y   Q  +     +    + GG E ++  K    +G ++L+ TPGRL D
Sbjct: 96  ISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSD 155

Query: 170 HLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKKIDNATSSFEFPQQNL 229
            ++      + NL  ++ DEADR+ E+G  ++V  I+  L  +++               
Sbjct: 156 IMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG------------- 215

Query: 230 LFSATLNEKVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIGKEKS 289
           LFSAT  E V   AK  L NP+ +                      ++  + +S   E S
Sbjct: 216 LFSATQTEGVEELAKAGLRNPVRV----------------------EVRAKSKS---ESS 275

Query: 290 FSISDYKIPTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDFHYSL 349
             +++ K P+ L   Y++     + + L  +L     + S +K++V F TC +VD+   +
Sbjct: 276 QQLTNSKTPSGLHLEYMECEADKKSSQLVDLL----IKNSDKKLIVFFMTCASVDYWGLV 335

Query: 350 FGEFKFSSSESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARG 409
             +     S S            +  +HG MK   R     +F       LL TD+AARG
Sbjct: 336 LSKIPALKSIS------------LIPIHGDMKQNARDKALASFTKASSGALLCTDVAARG 395

Query: 410 LDFPKVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLA 469
           LD P +  ++QYDPP +   + HR GRTARLG +G +++FL P E  Y++ ++   V L 
Sbjct: 396 LDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEAYVEFMRIRRVPLE 455

Query: 470 EYPLVK-VLDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQKAFCS 529
           E    +   D  P+                         + S    +  +M+   KAF S
Sbjct: 456 ERKCSEDASDVIPI-------------------------IRSAAMKDRAVMEKGLKAFVS 472

Query: 530 WVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSV 566
           +VRAY  H      IF  K L +G +A  + L   PS+
Sbjct: 516 FVRAYKEHHCSF--IFRWKDLEIGKLAMGYGLLYLPSM 472

[Close]

BLAST of ClCG11G001320 vs. TAIR 10
Match: AT1G71370.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-51
Identity = 145/522 (27.78%), Postives = 233/522 (44.64%), Query Frame = 0


Query: 46  DKMGFEVPTLVQAQAIPAILSRRHVLVNAATGTGKTIAYLAPIIHHLQKSNHRIQRADGT 105
           D+ GFEV T VQA+ IP + S + V+V+AATG+GKT+A+L P I  +++SN    +    
Sbjct: 32  DRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQV 91

Query: 106 FALVLVPTRELCMQVYESLQKLMQRYHWIVPGYITGGESRSKEKARL-RKGISILVATPG 165
             +++ PTREL  Q+++  +  +     +    + GG     +   L  +G ++L+ TPG
Sbjct: 92  MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151

Query: 166 RLLDHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRKKIDNATSSFEFP 225
           RL D +K      + NL  ++ DEADR+ ++G  K+V  I+  L  +++           
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG--------- 211

Query: 226 QQNLLFSATLNEKVNRFAKISLENPIMIGLDGGNNTLEFQPSEHGRFSGHDINDEGQSIG 285
               LFSAT  + V   AK  L N + +                   SG +         
Sbjct: 212 ----LFSATQTQAVADLAKAGLRNAMEV------------------ISGAE--------- 271

Query: 286 KEKSFSISDYKIPTQLVQRYVQAPCGSRLAVLFSVLKYLFERESFEKILVLFSTCDAVDF 345
                  S  K  + L   Y++     +     S L +L      +K++V F TC  VD+
Sbjct: 272 -------SKSKTSSGLYCEYLKCEADQK----SSQLVHLLIENKNKKLVVFFMTCACVDY 331

Query: 346 HYSLFGEFKFSSSESESRPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDI 405
              +  +     S S             F  HG M  + R T   +F      +LL TD+
Sbjct: 332 WGLVLSKIPTLKSIS------------FFSTHGKMDQKGRDTALASFTEASSGVLLCTDV 391

Query: 406 AARGLDFPKVRCIIQYDPPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHG 465
           AARGLD P +  ++QYDPP +   ++HRVGRTAR+  +G +++FL P ETDY++ ++   
Sbjct: 392 AARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDYVEFMRIRR 451

Query: 466 VSLAEYPLVK-VLDSFPVRGRKQFVENFVSLESHSWIMCLQRAVESFIAAEPRMMKLAQK 525
           V L E    +   D  P+                         + S    +  +++   +
Sbjct: 452 VPLQERKCSENASDVIPI-------------------------IRSLAIKDRAVLEKGLQ 463

Query: 526 AFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSV 566
           AF S+VRAY  H      IF  K L +G +A  + +   P +
Sbjct: 512 AFVSFVRAYKEH--HCSYIFSWKGLEIGKLAMGYGILSFPYI 463

The following BLAST results are available for this feature:

BLAST of ClCG11G001320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460014.1	0.0e+00	92.96	PREDICTED: DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucumis melo]	[more]
XP_004141076.1	0.0e+00	92.80	DEAD-box ATP-dependent RNA helicase 17 [Cucumis sativus] >KGN60526.2 hypothetica...	[more]
XP_022946513.1	6.1e-305	91.51	DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita moschata] >XP_02354...	[more]
XP_022975310.1	5.3e-301	90.66	DEAD-box ATP-dependent RNA helicase 17 isoform X1 [Cucurbita maxima]	[more]
XP_022154763.1	2.9e-291	85.95	DEAD-box ATP-dependent RNA helicase 17 [Momordica charantia]	[more]

BLAST of ClCG11G001320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XJN0	1.7e-204	63.18	DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 P...	[more]
Q0DLB9	3.8e-201	59.35	DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9H8H2	8.7e-105	38.71	Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 ...	[more]
Q6NZQ2	2.4e-102	38.71	Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2...	[more]
Q869P0	1.3e-100	35.16	Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of ClCG11G001320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB30	0.0e+00	92.96	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1G427	2.9e-305	91.51	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1IGD1	2.6e-301	90.66	DEAD-box ATP-dependent RNA helicase 17 isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1DL75	1.4e-291	85.95	DEAD-box ATP-dependent RNA helicase 17 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3CCT2	9.5e-280	85.09	DEAD-box ATP-dependent RNA helicase 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of ClCG11G001320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40700.1	1.2e-205	63.18	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G65900.1	7.2e-70	33.86	DEA(D/H)-box RNA helicase family protein	[more]
AT3G18600.1	4.1e-65	32.76	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G05450.1	6.7e-52	28.38	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G71370.1	9.7e-51	27.78	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 49..267 e-value: 2.9E-49 score: 179.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 61..252 score: 30.345831
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 343..440 e-value: 2.6E-24 score: 96.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 319..440 e-value: 4.0E-23 score: 81.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 318..487 score: 17.758934
IPR025313	Domain of unknown function DUF4217	SMART	SM01178	DUF4217_3	coord: 502..567 e-value: 8.6E-24 score: 95.0
IPR025313	Domain of unknown function DUF4217	PFAM	PF13959	DUF4217	coord: 504..565 e-value: 4.2E-20 score: 71.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 310..591 e-value: 9.9E-42 score: 145.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..255 e-value: 3.8E-72 score: 244.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 68..467
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 25..252
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 55..240 e-value: 3.9E-42 score: 144.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 568..593
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 579..593
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 16..587
None	No IPR available	PANTHER	PTHR24031:SF721	ATP-DEPENDENT RNA HELICASE DDX31-RELATED	coord: 16..587
None	No IPR available	CDD	cd17949	DEADc_DDX31	coord: 40..253 e-value: 6.3135E-107 score: 318.761
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 300..449 e-value: 2.64322E-39 score: 138.409
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 185..193
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 29..58 score: 9.40962
IPR014013	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	PROSITE	PS51193	HELICASE_ATP_BIND_2	coord: 34..336 score: 8.910227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G001320.1	ClCG11G001320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding