ClCG10G014360 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG10G014360
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr10: 28738090 .. 28739255 (+)
RNA-Seq ExpressionClCG10G014360
SyntenyClCG10G014360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTTCTCTGAAAATTTGCTAAAAATAGGACGTTTTGATGAAGGGTTAGATTGAATTTACTCAAAATTACAGTGATTATTTGCAGTTAAACCAATCCTTTTTATATGCTAGCTAATTACATACCTATGTTTATCATCTTTGTACAATTACAGGAAGGAATTTCTCTTTCTTCTACATCTGAAGTGGAGGAACAGAGCTTCGTAGCTCCAATTTACGGGCTTCCATGGAGGACTGAAAAGGTGAAGCATATACCCTTGAAATCTACCAATTGAATAATAATAATAATAGCGACAATAATAATAGCAACAACAATAGTAGTACTAATCCCTTTAGGTTTCTTGACTATTCTTAAATCTACCAATTGATAATACGTGATTCAAATTCATACTTCCATTCCGTTCCATTGAATTTATTGTTGAGTAGCCTCTATGGCTTTCCCATTATTCTCCAAATCGATCTTCTTCTCCAAAAATTGCCTTTTGCAGTCATAGAAATAAACCATAAGAACAACCCACATTACAATATCCCCCACACACTTCAAACCCACAGACACTACATTCCCCAAATCCCCACAACTCCCCCCATTCCACAAAGCATAGAAACATGGCAGCCCAAAAGCCACCTTCAAAGCAAAGAAAACTAGCATCAAACTGAACCCTAACTTCCTGCTGCCTCTGCTTAAATATGCTGCCACTCCAATTGCTATGTAGCCCTGGTTCTTATCCAAGATTGAGATAACCATTCCCATGTTCCAAATGGCACTCCACTCTATGTATTTTGCCAACAAAAATACAAAGATTGTCCCAAAGATAAGTGAACTTTTTGGCATCAAAAACATGTTTGTTGACAAAGCGACCAAACCCAACAGAGTTAGTGAGGCAAACAAAAGAGCATACAGAGATGTTGCCAGTGAGCCTCTCAGTCTCGCAGCCACCTGCTTTCTGACATCAACCAGCATCTCCTTGAAACCCATTTGGGAGTTTCCTCCATATATTGCTGCTGATATGGAGACTGTTGAGATTGTGGAGAGAAGGTCTAGGAAGAAGATGAGTGCTGAAGAGAGAAAAGTTGAGATCAGAAACCTGTGGGAGAAAGTTGCTTTGAAGTTGTCGTTATCAGAAGAGCGCTGTGAGAAGCAGGCTGTGGTGTCACCTAATTGA

mRNA sequence

ATGGCGGAAGGAATTTCTCTTTCTTCTACATCTGAAGTGGAGGAACAGAGCTTCCCCTGGTTCTTATCCAAGATTGAGATAACCATTCCCATGTTCCAAATGGCACTCCACTCTATGTATTTTGCCAACAAAAATACAAAGATTGTCCCAAAGATAAGTGAACTTTTTGGCATCAAAAACATGTTTGTTGACAAAGCGACCAAACCCAACAGAGTTAGTGAGGCAAACAAAAGAGCATACAGAGATGTTGCCAGTGAGCCTCTCAGTCTCGCAGCCACCTGCTTTCTGACATCAACCAGCATCTCCTTGAAACCCATTTGGGAGTTTCCTCCATATATTGCTGCTGATATGGAGACTGTTGAGATTGTGGAGAGAAGGTCTAGGAAGAAGATGAGTGCTGAAGAGAGAAAAGTTGAGATCAGAAACCTGTGGGAGAAAGTTGCTTTGAAGTTGTCGTTATCAGAAGAGCGCTGTGAGAAGCAGGCTGTGGTGTCACCTAATTGA

Coding sequence (CDS)

ATGGCGGAAGGAATTTCTCTTTCTTCTACATCTGAAGTGGAGGAACAGAGCTTCCCCTGGTTCTTATCCAAGATTGAGATAACCATTCCCATGTTCCAAATGGCACTCCACTCTATGTATTTTGCCAACAAAAATACAAAGATTGTCCCAAAGATAAGTGAACTTTTTGGCATCAAAAACATGTTTGTTGACAAAGCGACCAAACCCAACAGAGTTAGTGAGGCAAACAAAAGAGCATACAGAGATGTTGCCAGTGAGCCTCTCAGTCTCGCAGCCACCTGCTTTCTGACATCAACCAGCATCTCCTTGAAACCCATTTGGGAGTTTCCTCCATATATTGCTGCTGATATGGAGACTGTTGAGATTGTGGAGAGAAGGTCTAGGAAGAAGATGAGTGCTGAAGAGAGAAAAGTTGAGATCAGAAACCTGTGGGAGAAAGTTGCTTTGAAGTTGTCGTTATCAGAAGAGCGCTGTGAGAAGCAGGCTGTGGTGTCACCTAATTGA

Protein sequence

MAEGISLSSTSEVEEQSFPWFLSKIEITIPMFQMALHSMYFANKNTKIVPKISELFGIKNMFVDKATKPNRVSEANKRAYRDVASEPLSLAATCFLTSTSISLKPIWEFPPYIAADMETVEIVERRSRKKMSAEERKVEIRNLWEKVALKLSLSEERCEKQAVVSPN
Homology
[Close]
BLAST of ClCG10G014360 vs. NCBI nr
Match: XP_023526060.1 (uncharacterized protein LOC111789655 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.4 bits (555), Expect = 4.7e-53
Identity = 113/137 (82.48%), Postives = 124/137 (90.51%), Query Frame = 0 

Query: 31  MFQMALHSMYFANKNTKIVPKISELFGIKNMFVDKATKPNRVSEANKRAYRDVASEPLSL 90
           MFQ+ALHSM F N+NTKIVPKI+ELFGIKNMFVDKA KPNRVSEA+ RAYRDVA+EPLSL
Sbjct: 1   MFQIALHSMNFVNRNTKIVPKINELFGIKNMFVDKAIKPNRVSEASIRAYRDVANEPLSL 60

Query: 91  AATCFLTSTSISLKPIWEFPPYIAADMETVEIVERRSRKKMSAEERKVEIRNLWEKVALK 150
            AT FLTSTSI LKPIWEFPPYIAAD++TVEIVERRSRKKMSAEE +V+IRNLWE+VALK
Sbjct: 61  TATRFLTSTSICLKPIWEFPPYIAADIDTVEIVERRSRKKMSAEEMRVDIRNLWERVALK 120

Query: 151 LSLSEERCEKQAVVSPN 168
           L  SEERCE QAV+  N
Sbjct: 121 LLSSEERCEMQAVLPSN 137

The following BLAST results are available for this feature:
BLAST of ClCG10G014360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526060.14.7e-5382.48uncharacterized protein LOC111789655 [Cucurbita pepo subsp. pepo][more]
BLAST of ClCG10G014360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG10G014360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG10G014360 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G014360.2ClCG10G014360.2mRNA