ClCG10G013260 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G013260
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr10: 27456952 .. 27457537 (-)
RNA-Seq Expression	ClCG10G013260
Synteny	ClCG10G013260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCTCACTGTCTAGCACCGACCACCATCCAAGGGATTGGCCCGATGCGGCAATCTGAGCGCAGATGGACCCGAGGGGTCCCCTTTTCTGACGGCATTGCGACCGAGGAGCTCAAGCAACATGCTCCACAGAAAACACATCCACGGAGTGATGCACGTTACGCCCATGAACCACCAATAAGGAGCGACCAACGTTCTAAGTAGTTCTGACTTGTTTTCTTTCTTCTGTTCGAATAAAGTAGGAGGAGTTCACCCTCCAACGAGGACATTGGAGATCAGCCGGGGGAGGTTTATCAAACCCCTAATTCTCGAAGTGAATACCCACGAAGGTTCGAGCGTGGCCAAGGGAGCCACTGGGGGTAGCCTGGCAATAGATCGGGGAGAGGCTTGTAGACCCAGTCATCGTTGGACATGTGCGATAACAAGGCTTGGCAACGACTCACCAGAATTGGCAATAGGTAGGGAGTCGAGCTCGCCAACACCTCGGCCAGAGGGTTTAGCCGGACAGGGGAAAGCGCGCCCCAAAGACGTCAACACAGCATGCAGGCACGCAAGCGGCATGACAAGCCAGCATGCCCCATAG

mRNA sequence

ATGAACGCTCACTGTCTAGCACCGACCACCATCCAAGGGATTGGCCCGATGCGGCAATCTGAGCGCAGATGGACCCGAGGGGTCCCCTTTTCTGACGGCATTGCGACCGAGGAGCTCAAGCAACATGCTCCACAGAAAACACATCCACGGAGTGATGCACGAGGAGTTCACCCTCCAACGAGGACATTGGAGATCAGCCGGGGGAGGTTTATCAAACCCCTAATTCTCGAAGTGAATACCCACGAAGGTTCGAGCGTGGCCAAGGGAGCCACTGGGGGTAGCCTGGCAATAGATCGGGGAGAGGCTTGTAGACCCAGTCATCGTTGGACATGTGCGATAACAAGGCTTGGCAACGACTCACCAGAATTGGCAATAGGTAGGGAGTCGAGCTCGCCAACACCTCGGCCAGAGGGTTTAGCCGGACAGGGGAAAGCGCGCCCCAAAGACGTCAACACAGCATGCAGGCACGCAAGCGGCATGACAAGCCAGCATGCCCCATAG

Coding sequence (CDS)

ATGAACGCTCACTGTCTAGCACCGACCACCATCCAAGGGATTGGCCCGATGCGGCAATCTGAGCGCAGATGGACCCGAGGGGTCCCCTTTTCTGACGGCATTGCGACCGAGGAGCTCAAGCAACATGCTCCACAGAAAACACATCCACGGAGTGATGCACGAGGAGTTCACCCTCCAACGAGGACATTGGAGATCAGCCGGGGGAGGTTTATCAAACCCCTAATTCTCGAAGTGAATACCCACGAAGGTTCGAGCGTGGCCAAGGGAGCCACTGGGGGTAGCCTGGCAATAGATCGGGGAGAGGCTTGTAGACCCAGTCATCGTTGGACATGTGCGATAACAAGGCTTGGCAACGACTCACCAGAATTGGCAATAGGTAGGGAGTCGAGCTCGCCAACACCTCGGCCAGAGGGTTTAGCCGGACAGGGGAAAGCGCGCCCCAAAGACGTCAACACAGCATGCAGGCACGCAAGCGGCATGACAAGCCAGCATGCCCCATAG

Protein sequence

MNAHCLAPTTIQGIGPMRQSERRWTRGVPFSDGIATEELKQHAPQKTHPRSDARGVHPPTRTLEISRGRFIKPLILEVNTHEGSSVAKGATGGSLAIDRGEACRPSHRWTCAITRLGNDSPELAIGRESSSPTPRPEGLAGQGKARPKDVNTACRHASGMTSQHAP

Homology

The following BLAST results are available for this feature:

BLAST of ClCG10G013260 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013260 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013260 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG10G013260 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G013260.2	ClCG10G013260.2	mRNA