ClCG10G012470 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G012470
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nucleolin 1 isoform X1
Location	CG_Chr10: 26448351 .. 26457279 (-)
RNA-Seq Expression	ClCG10G012470
Synteny	ClCG10G012470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTGAGGATCGTGTAGATGATCGGACGTTCAAGGTTGATTTCACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGTACGGACTACCCTAGCCTTTTTAACATTCATGTGCCTGAGAGGTTTTTGCCAAGCAATGAGATTATCGGTTTTGTGACGATCTGCCTGAGTGTTTTAGAATTTCTCTTAGGTTATTCATGTGAAGGCTATCTTCTTCTTCTTAACTGGTTGTTGAGGAACGTGTTTGGTTGAAGAAATGGGAATGTAGCATTTGCCGGTTGTTATATATTTGCTAATGCCGAATGAAAACAACAAATAGTTCTTATTCTTTATATGCTATGGAATTCGCTAACGGTTGATGGTTGATGTCTAATGAGATGTATTCCAACTCAATGCTATATTTTATTCATCCAATGGAGACTGCTTCTTATAATGTGATATGCAATAGCCTATTTAAGAATTTGGTTAGCCGTCACCCTGTTTATCTGTCCGCTCCTTTTTGAAAAAACCTCCCTGAGCTAGGTGAACTTGCAACTGAGATTATTCATTTAGTGTTTGATGGGCGGCTGTTTCCATTTCTCATTGATAAGATATAAGTACATTGAATTAATGAAATGTACAAATAAAGGAAGAATCTAATTAGCATAAAAATAATAGTTGAAGTTACAAAATAGCCTTTAACTATTACCCCCGGATGTGATGATTAAAATAATGTTCTCTTGAAATAACTAAGAAGAGTTGGCAATAATCTTGTGGAGGCAAGAGATTGAGATTGAGCAAATTGGATGAAAATATGTCGTGCTCTTTGTCTTTGCACTAGATTTTTCTGTTGGAGGGATGTATTGAGAATGTCATTATGAAGAAAGATCTTGGAGTACTCATAATATCTTCCATGAGGGTGTTTGAAGAATTCTAAAAGAATTTAGTGGCAAATCCATTGTGTATTTGATCTTTTTAACTCCCAAAATTTAAGAAGCTTAAATAATTTTGTCTACCCTAAAGTTGCTTCTATCTAAACCAAAGCAATCCTTGGGGGGCCACTTAGGTCGGGATCCGATCTGGATTGGTTGGCTTAAATTTTACCACCTCTTTCTCTGGGTATGGATACTGGAGAAAGCAGGAAATGCCGTTTGAATGTGTGTGGAAAGAGCTAGTGTTATAGTCTCTTTCCCCTCTTGATACATCTCCTCCTGTGTGCTACGTGGATTTCCAAATTAGATCTCTGAGTTGGGATTTGAGATTAGCTTTAGAAGATTGGTAGCTTCAAGTAGGGAAAAGTTTTGCAAGTGGTCTAGCCTTTGGGATCAACAAGAATTTCAGCTTTTTCGAAGGTTTCATTTTTTCAGCAAGTTTTTCATCTTCTTTACTTTACAAACCAAACCATACCTAAGCCAACCCTCAAGATTAGAGTATACTTCCGCCAACTTTTGGAAGTCTTTGAGAAATTGTTGTGCTTGAGCTTCATATTTATTAATTTATAGGACAGGATCTTGTTTGATACCAAAAGATTCTAGAAGGGTTAATTAGTTGTTGGAGGTAGGTGTTTCAGGGTGTTTTAACTCTAGAATTGGAGATTTAGAGGAACCAATCATGGGAGACTAGAATCTAACAATGGACAAAACAAGCCATGTTGGATCAAGTTGACTTGGCTCTGTTAGGACATCAATGAGGGAGAGGTTGTCAATAACCTTGTCAAAGAGCTTTGTGCTTTTGGCACGGCTTTTGGCGATGAATTTCTCCCAATTTCATTAAGTGATATTGAAGTCTCTTCCTACTACATTAGCCATAACAGCGGCACCCAAGATTTTCCAATTTACTTAAAAAGAAACCTGGATATAAACATCTTGAGAGGTGCCATAAATATTGAAAAGCCCAAGAAGAAGAAAAAATAGCAGGGGAAAACTTGATGCTTTAAGAGAAAGGTCGTAGCCATAACAAAGGTACCCAAGATTTTCCAATTTCCTCCAGAAATTAAAAAAAAAAAGAAAAAATCTTGATATGGACATCTTGAGAGGGTCCGTAAATATTGGAAAGATGAAGAAGGCAAAGAAGTCCAACCCAACATCTATAGAGGTCCAATTAGATTTGATTATCTTTTGATTTGTACAGGGAAGCTATTAAAGAATCATGGTTCCAACTCTTAAGCTTCTTACGTTCCTTCAAATATTCATGGATAAGCTACATGATCCCTTTCATTTTCTAAGTTATTTTCTTAGTTGATTGAAGACTTGAGGTTTGGAATCTATCTGATTCTTTCATCTTCTTCCCTTGCCTTTTCTTCTGTTTGGAGGGAGTAGGAAAATACAAGAATCTATAGTTTTCATTAACCCTTTATCCAAATTGTCATTGTGAAGAAAGCCACGGTCATCTCTCTATTAGAACAAGGAAGGCCAAGAAAAGCCTGCTTCATCTTCAACCTCAAATCGTTATGGGGTCAAGGAGGATGAAAGGTTATCTACTCAAGTCTCGATGGAGTCCAGCCGTCTCTTAGGCAGAGGAGTCTAGCTTGGTTCACCCTTTTCGATATGAGGATTGCTGTATTACGTGGACTGGTTGGGGCTAATTACCTCTTGGAGAGTTGCGAGAGTCCTGGTAGTTCTCATGGAGTTTTCTTCAAACCACACTGGAGACATTCATCTTGATAAGAAGATGCCGTCTATAATAGAGCATTAACCTTAGTATCTTGCTTCTTTTTCTTTTTCTTTTTCTTTTCTATTGTCTCAATGCTCTTCTTTCTTTACATTCTTTTGAATTGCATTTCCTTTGAACTCATTCTTCCAATTTTCATGGTCTTAAATTCCTGCCCCCTCCACAAAAAGTACTAATAACATTTTCATTTTTCTGGAATCTGAGAGGCTTTTACTTGCTATCTAGTGCACTTTTGAGGCACCCTAAGTAGAAGACATTATTTAATACAATGGATATTGATGGGATTCAGTAGGGAGTTAGATATCTCCGCAAAAAATACCAAAAACATTTTCCATTTTTGGAATCTTAGAGGTTTTTACTCGTTGTCTAGTGCTCCTTCGAGTCACCTTAAATAGATGTTATAATTTTCTTCAAGTATCTTTGAGGGCTTCATAGGCTTTCAAAATGCAGTGAATACGGGGTTAATTAGTTCATTTTATTGACTTGGTGCTAGATAAAGAAAGGTAATTGGAAAACTAGTTTATAATTGGCTGGGGGACTTTTCCCTCCATTCCTTGTTCCCCTGCCTTTATCATTCGTTTGCTTTCAAAAATTGTTTTGTGGCCTCGATTCTTCTGCCATTGGGGACTTCCTTGTCTATCTCTCTTGGTCTTGGTCATTCCTTTATTGTTGAGAATCTTGAGATATTGCGACTCTTCTAACCTTAATTGGTGATTTTGTTGTTTGGGAGGGGAGAAGTGATCTTCATTTGTGTAGGCCATTCCCTTTGGGGGTTCTTTTTTCTTTTTCTTTTCTGTAGCTCTTTCTTTCATTGTCGGGTGAATCCTTTGTCTTTGAGTCCTACCATCTTCTCACTGTTTTGGAAGATCAAAGTCTTGAAGATGGTTAACTTTCCTTGGTAGGGTTAATATGTGGATCGCGTTCATAGGATTACACCTGAGTTCGAGCCCAACATTGCATCATTTGTAGGGGATCACCCGAGGATTTAGATCATCTCATGTGGTCCTGTTAGTTTGCAAGATTGTTGTTGAGCAACTTTTTGAGTCATTCTCCTTCAGGTTGGCTTATTGGAGAACTTGCAGTTCCATGTGCGAGGAGTTGCTCACCATTTCCTCTTTTCATGAAAAAGGGTTAGCTTGTTGTGGTTAGCAGGGCTTTTATGCTATTGTTTGGTGCATTTGGATGGAAGGAATAATACAATTTTAAGTAGAGTGGAGTGATCTGGGTCCCTTATTAGGTACCATACCTCGTTTCGGTTTCCATTTGTAAAGACTTTTGTAGTTTTCCCTTAGGTCTCATTTTGTTTAGTTGAAGTCCCTTCTTAGAGTAGTTGGACTATTCTTGGGTCCCCGCAACCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAACCCCTACTTTATGGAGCTGAATGCTTGGAAAATTATTGTGAGATGTGGGCATTTATTTAAGTGATGTTGTATTGTTTAGCCTTCGAATATCCCTTTTTTTCTCAGGTGGTGTGGTATGAGATTTTGGAATCTTTCTTCACTGCATTTTAAAATTTAATTCAGCATTATACTTATATATTTTTCGTATACCTGTTTGTTTGTTGCTAAAATTATGTCCATGTTTCATCTTTTTCTATATTTAATGTTATATGGCACAAACTGGGATCGAGAGCATCTGTTTGAAGAGATCAAATTTTATTAAATTTAATGAATGTTCTTTTGTAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGTAATTTGATTCTCATCCCTCTTGTTCATATTTGTAATTTGGGTAGTAACTTGTGTTGAGTCATTCTTGCAGCCAGTTGACTAATTGTTTTAAGCTTCATTTCAATAGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGCGCCGCCTACTAAATCTTCTGCCAATGAGGTGCCCAGACCAAGGTCTCCAGTAGCAGAGCCAGATACAATAAATAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGGGAGGAATTGCTAATGATAAAACCCGTGTTGTTCCAAGGTCTGAAGTTAGTCGTGTCAAGCGTTCTTCTCCTGAACAGGTTCCTAGTCATAGGAAAAGGAACCGGGCTGATGATCATCAAGGCATTGAGGTTCATGATCTGACTTTTCTCTTCTAAGTTTGTACCTAGCGGCAGTTAACTGGGTTTTAAAATGTGAAATTTTTCTGGGAGGGGGAACCCATGGCCCCTAGGCTGTATTCTCTTCCTTGTTTTGAATATATTCCTTTTGTTGTTTCTTTTTAAAAGAATAATAACAATTAAAAAAAAAAAAGTGAGAACTCAGAATTGGTTTATTTGTTTGTTTTTGGATTTTTTTTGGGAAAACGTGAAATTTAAATTGGTGAAAGGCAATGGGCGGAGGGTTTGCTGAACAATATCTTGTTGTTCTTCAGTTTGCAATGCAATAGCTTTGAAATTTTAGGAACCCACAAATTTTTGTTTAAAACTGCATGTTTTTATGTAGTTCAAATTTTAAGTAAATTTAAATGAAGTCCCCAATTATGGTGTACCTATTTGCCCTTGTGTGTGTGTCTTGTTTTTCTTACCGCAATGAACTCTTAATTTTCTTCTTCTGGCTATGTCGATATGGCTATGTTTAAATTCAGGTTTTTCTTTATGTAATACAGCTTTATTGTAATGCAACTTTTGGTGCTTTGGGAGTCTTCTTTCTCCCTCCATTTTGTTTGTCAATGAAATTGTTTTCCAATCCAAAAAAGGGTATGCTTAATTCATTTTTGTAACAATAATTTGAATGCTGTACTAAACTACCTTAGTTTTTGGTACTTTTAGTAATTGAAAATAATTAGTCCAGAATATTGGATGGTCTATTGATGCATTATTCTAATGGGAAATAAATTCTCACGTTTCTTGTTTTACAGAGGGAGGCAGCGTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAGTGCAGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTTCTAGGAGGCTTGAATCTGTTGCAAAAGTTCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACAGAGGCAGCTGAAGATGTGGTCAGAGTTAAATCCTCTAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTCCACTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATAAATATGGGAATATAAATCATACAGAGGATCGACCATACTCAGCCACCTATCTTGAGAGAAGCAATTATAGTGGAAAATATGCTCCCAATGAGGCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTAATATTCAGGGTCACAGAGTATTCAACCAATCTTGGACTGCTGAATCAGGAGTAAGAAAGGGAGGCAATTTACGAACTTTGCCATTCCGGACAATTGAGAATTCAGATGATGATCGTGTGACACAATATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACCTGGAAACCACCTCACTATCAGGACCCAGGCATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGCACCAGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTGACTCTTGTTAACCAACGGAAAAAGCCTGCACTAACCCTTCAGAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGTGGGCTCTCTTTTCTGGTTTCTGGCTCGTCTATTTAAATAATTGTTAGTTTGAACGGTTCTTTTGTTTATCTCTTTTTCTTTCTATTAGTGAGGTTTCTCATTCTAGTTTTTCCCCATCATTGATCATCAACAATCCGTTTGGGCTCATGCTTTATTATTTTCTAGTTAGTATTTCATTTTAAATAACTTTCTCATGTTACCTCACACAGGCCAATTTGCTGGAACTCGTCCTTTAGAGGAAGCCGATGCTCGAACTATCTTTGTTAGCAATGTAAGAAGTCACTCTTTTGCTGCTTCTGTGAAGAACTGGTGACTGTACATCGCCTTACGTTAATTTTTGCATACAGGTCCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTCGGAGAAGTTGTAAAAGTCACCATAGTAACTGATGCAACCACTGGGCAACCCAAAGGGTGAGGTGTCACAGTTCTTTATTGTACCTCAGCTATCTCTTTTTGTTACCTCTACTGCAGACTACAAAGTTTCCTACTTTACTTTTTAATAAATTGAGTGATGTGATTGGAGCAGGTCGGCTTATGTGGAATTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTACCTACCGTATTTCTGACATTTTGCTTTGTAGTATGAACCATCACTCAAAGAAGAAGTGTTGGCAAACTTAACCTTTTGTTTTTGGGAAAATTGGAAAAACCACTCCTAAAGTATGGTGGCAGTTGCAATTATACTCTCAAACTTTAAATTGTAAAAGTTGAGGACTCAAACTTTTATAAGTGTTAAAATTGGCTCCTAAAACTTACAAAAATATAGAAATTGTAACAATGGTATAAGTGTGACGATTTAATTTTTATCATTTGGGAGTACAATTTCTATGACTATTGTAAGCTTGGGGTTCAATTTTACCATTTTTTAGAAGTTTGAGGGCCTAATTTTTACAATTGAAAGTTGGAGGGTGTAGTTGCATCTACCACCATACTTTAGAGAGGTGGTTTTTGCAATTTGCCCAATGTTTTTATTTTTTTTCCTTTTTCTTTTTTGTTCTTTTGTCCCCCCACCCCACTTCAAGTTAGCATTTGTATCTTAAATGAGCGTTTTACTTTTTGTTAGGGAAGTTGTGTGGGCAACTGATATTTTTTACTTTCCTTCTTTCTAAATGGATTGTTATTCAATGTTATGGTTGCTTTTCACATGGTCAATGAATTTTTGCTGGTGTTTCCATGGCTAACTAAGCAGAGGGAAAGTTAAATAAAGTTCCCGAAAAATACTGAAATGCAAATGGATCTAGAGCAAACAGAAAAAATGTACAGGCTTCTTTCAGTTTTTGGCTTTATTTTTGTTTATTTTGGTTTCTCATTGAAAAAAAAAAAAGGCGTTCAAGAATCTTGGCTGCATTTGGTTAACTTGTTCTTCCACTGGTATTATAATTTGAACATTTTTATCGTGATGCAAAAACCATGCCACATGATGACACAACTAGCATGATATGCTTTAGTCAAGTAGCGCTCGGTATCAGATTGATTAGAACCCAGACAGTTTGTTGAGGTGTGCTTCATAATGTATGTAGTCAACGAATGAAGCTGCTAATTTGATTGATTTGTCAACTGCAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTACCTGGCCTCGTGCTGTGCGAGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCATTCTTGAGGGGCGTTCCCGGTGGATTTAGGGCTCGTCCCCCGATGAAACTTGGCGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGCGCTTTTCTCTCTGGTAATTCTGTACCTTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

mRNA sequence

ATGGGGAGTGAGGATCGTGTAGATGATCGGACGTTCAAGGTTGATTTCACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGCGCCGCCTACTAAATCTTCTGCCAATGAGGTGCCCAGACCAAGGTCTCCAGTAGCAGAGCCAGATACAATAAATAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGGGAGGAATTGCTAATGATAAAACCCGTGTTGTTCCAAGGTCTGAAGTTAGTCGTGTCAAGCGTTCTTCTCCTGAACAGGTTCCTAGTCATAGGAAAAGGAACCGGGCTGATGATCATCAAGGCATTGAGAGGGAGGCAGCGTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAGTGCAGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTTCTAGGAGGCTTGAATCTGTTGCAAAAGTTCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACAGAGGCAGCTGAAGATGTGGTCAGAGTTAAATCCTCTAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTCCACTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATAAATATGGGAATATAAATCATACAGAGGATCGACCATACTCAGCCACCTATCTTGAGAGAAGCAATTATAGTGGAAAATATGCTCCCAATGAGGCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTAATATTCAGGGTCACAGAGTATTCAACCAATCTTGGACTGCTGAATCAGGAGTAAGAAAGGGAGGCAATTTACGAACTTTGCCATTCCGGACAATTGAGAATTCAGATGATGATCGTGTGACACAATATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACCTGGAAACCACCTCACTATCAGGACCCAGGCATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGCACCAGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTGACTCTTGTTAACCAACGGAAAAAGCCTGCACTAACCCTTCAGAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCTGGAACTCGTCCTTTAGAGGAAGCCGATGCTCGAACTATCTTTGTTAGCAATGTCCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTCGGAGAAGTTGTAAAAGTCACCATAGTAACTGATGCAACCACTGGGCAACCCAAAGGGTCGGCTTATGTGGAATTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTACCTGGCCTCGTGCTGTGCGAGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCATTCTTGAGGGGCGTTCCCGGTGGATTTAGGGCTCGTCCCCCGATGAAACTTGGCGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGCGCTTTTCTCTCTGGTAATTCTGTACCTTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Coding sequence (CDS)

ATGGGGAGTGAGGATCGTGTAGATGATCGGACGTTCAAGGTTGATTTCACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAAAGAAGAAGCACAGAATGAACTTAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGGATTTATATGTGGCGCCGCCTACTAAATCTTCTGCCAATGAGGTGCCCAGACCAAGGTCTCCAGTAGCAGAGCCAGATACAATAAATAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGGGAGGAATTGCTAATGATAAAACCCGTGTTGTTCCAAGGTCTGAAGTTAGTCGTGTCAAGCGTTCTTCTCCTGAACAGGTTCCTAGTCATAGGAAAAGGAACCGGGCTGATGATCATCAAGGCATTGAGAGGGAGGCAGCGTTTCAGGTAAGCATTGCTGCCCCTCGGCGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAGTGCAGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTTCTAGGAGGCTTGAATCTGTTGCAAAAGTTCCAAATCCTATGGCAACTGTTATTAAGGCTGTGACAGAGGCAGCTGAAGATGTGGTCAGAGTTAAATCCTCTAGTGTTTTTGACCGACTTGGTCGTCAATCTTGTGATATGGATTTAACAGAGTCCACTGGCCAACTTGCAGAATATGGAGTAACTTCTGTAGAGAACGATAAATATGGGAATATAAATCATACAGAGGATCGACCATACTCAGCCACCTATCTTGAGAGAAGCAATTATAGTGGAAAATATGCTCCCAATGAGGCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTAATATTCAGGGTCACAGAGTATTCAACCAATCTTGGACTGCTGAATCAGGAGTAAGAAAGGGAGGCAATTTACGAACTTTGCCATTCCGGACAATTGAGAATTCAGATGATGATCGTGTGACACAATATAAACAGAAGGATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACCTGGAAACCACCTCACTATCAGGACCCAGGCATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAAGGCACCAGATCTGCTGTGCAAGTTACGGAGAATGGTGAGCCAGTGACTCTTGTTAACCAACGGAAAAAGCCTGCACTAACCCTTCAGAAAGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCTGGAACTCGTCCTTTAGAGGAAGCCGATGCTCGAACTATCTTTGTTAGCAATGTCCACTTTGCTGCTACAAAGGATAGCCTGTCTAGGCATTTTAACAAGTTCGGAGAAGTTGTAAAAGTCACCATAGTAACTGATGCAACCACTGGGCAACCCAAAGGGTCGGCTTATGTGGAATTCATGAGAAAAGAATCTGCAGAGAATGCGTTGTCTCTTGATGGGACCTCGTTTATGTCTAGGATTCTGAAGGTCGTAAGGAAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTACCTGGCCTCGTGCTGTGCGAGGCTCGCCATTTCCTACTCCTAGATTTACCAGAGTTCCATTCTTGAGGGGCGTTCCCGGTGGATTTAGGGCTCGTCCCCCGATGAAACTTGGCGCCAGGAGCATGCAGTGGAAGCGGGATAGTCAGACCACAACTGCTGACAATGGCGCTTTTCTCTCTGGTAATTCTGTACCTTCATCTGGTGCTCGTAGTCTCACCTATGTTCGAACAGAACCTAAGCCAGCGGACAAGTAG

Protein sequence

MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSHNLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRADDHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTNRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEYGVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVNISVNVNTWKPPHYQDPGIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVPSSGARSLTYVRTEPKPADK

Homology

[Close]

BLAST of ClCG10G012470 vs. NCBI nr
Match: XP_038904558.1 (nucleolin 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 630/679 (92.78%), Postives = 650/679 (95.73%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSED VDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDPVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PPTKSSANEVPRP+SPVAEPDTINNSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKSSANEVPRPKSPVAEPDTINNSH 120

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGKSEKLSSRRRNREW GIAND+TRVVPRSEVSRVK SSPEQVPSHRKR+RAD
Sbjct: 121 NLESDSERGKSEKLSSRRRNREWRGIANDETRVVPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVS SNSDTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSTSNSDTTN 240

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
             RRL+SVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQS DMDLTES+GQLAEY
Sbjct: 241 CPRRLQSVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           GVTSVENDKYG++NHTEDRPYSATYLER+NYSGKYA NEAMFEPET LASDS SE+EDVN
Sbjct: 301 GVTSVENDKYGDMNHTEDRPYSATYLERNNYSGKYALNEAMFEPETELASDSASENEDVN 360

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           IQGHR+F  SWTAESGVR+GGNLRT+PFR +ENSDD+RVTQYKQKDQPSLVANSSRDIVN
Sbjct: 361 IQGHRIFEDSWTAESGVRRGGNLRTVPFRAVENSDDERVTQYKQKDQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQDPG IPELAGQKFLQESELQ TRSAVQV ENGEPVTLVNQRK+PA 
Sbjct: 421 ISVNVNTWKPPHYQDPGQIPELAGQKFLQESELQRTRSAVQVMENGEPVTLVNQRKRPAP 480

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQKEFQKPPLSANGQF GTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKV I
Sbjct: 481 DLQKEFQKPPLSANGQFPGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQP+GSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQ+EGAST TWPRA
Sbjct: 541 VTDATTGQPRGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQVEGASTATWPRA 600

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPTPRFTRVPF+RGVPGGFRAR  MKLGARSMQWKRDSQTTTA+ GA  SGNSVP
Sbjct: 601 VRGSPFPTPRFTRVPFMRGVPGGFRARSLMKLGARSMQWKRDSQTTTAETGASPSGNSVP 660

Query: 661 SSGARSLTYVRTEPKPADK 679
           SSGARSLTYVRTE KPA+K
Sbjct: 661 SSGARSLTYVRTESKPANK 679

[Close]

BLAST of ClCG10G012470 vs. NCBI nr
Match: XP_008461790.1 (PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 615/679 (90.57%), Postives = 646/679 (95.14%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PP KSSANEVPRP+SPVAEPDT NNSH
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGK+EKLSSRRRNREW GIAN++TRV+P+SEVSRVK SSPEQVP+HRKR+R D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           D QG EREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEPHSKRLRSVVSASNSDTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
           R RRL+SVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQS DMDLTES+G+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           GVTSVEND+YG++NH+EDRPYSATYLERSNY GKY+ +E MFEPETGLASDS SE+EDVN
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           I+GHRVF+ SWTAESGVRKG NLRT+ FR ++NSDD+RV QY QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQD G IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK PA 
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQKEFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV I
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPT RFTRVPF+RGVPGGFRARPPMKLGARSMQWKRD+QT TADNGA LSGNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKPADK 679
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of ClCG10G012470 vs. NCBI nr
Match: XP_011651783.1 (nucleolin 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1178.3 bits (3047), Expect = 0.0e+00
Identity = 607/679 (89.40%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PP K+SANEVP  +SPVAEPDT NNSH
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGK+EKLSSRRR REW GIAN++TRVVPRSEVSRVK SSPEQVP HRKR+R D
Sbjct: 126 NLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSRPD 185

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVATTRPS+A+KEPHSKRLRSVVSASNSDTTN
Sbjct: 186 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
           R RRL+SVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQS DMDLTES+G+ +EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRPSEY 305

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           G T VEND+YG++NH+EDRPYSATYLER NY GKY+ +E MFEPETGLASDSTSE+EDVN
Sbjct: 306 GATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSENEDVN 365

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           IQGHRVF+ SWTAESGVRKG NLRT+ FR +ENSDD+RV QY QKDQPSL ANSSRDIVN
Sbjct: 366 IQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQD G IPELAGQKFLQESELQGTRSAVQV ENGEPVTLVNQRK PA 
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQRKTPAS 485

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQ+EFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV I
Sbjct: 486 NLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV WPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRA 605

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPT RFTR PF+RGVPGGFRARPPMKL ARSMQWKRD+QTTTADNGA LSGNS+P
Sbjct: 606 VRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKPADK 679
           S GARSLTYVRTEPKP DK
Sbjct: 666 SPGARSLTYVRTEPKPVDK 684

[Close]

BLAST of ClCG10G012470 vs. NCBI nr
Match: XP_023528108.1 (nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1149.4 bits (2972), Expect = 0.0e+00
Identity = 598/681 (87.81%), Postives = 633/681 (92.95%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSA--NEVPRPRSPVAEPDTINN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYV PPTKSSA  NEVPRP+SPV EPD  NN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRPKSPVEEPDIRNN 120

Query: 121 SHNLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNR 180
           S+NLESDSERGKSE+LSSR+ NREW GIAND+TRV PRSEVSRVK SSPEQVPSHRKR+R
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 ADDHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDT 240
            DDHQG EREAAFQVSIAAPRRLLQFAMRDAVATT+PS+  KE   KRLRSVVS SNSDT
Sbjct: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVSVSNSDT 240

Query: 241 TNRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLA 300
           TNR RRL+SVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSCDMDLTES+GQ+A
Sbjct: 241 TNRPRRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIA 300

Query: 301 EYGVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESED 360
           EYGVT V +DKYG +N T+DRPYSATYL RSNYSGKYAPNE MFEPET LASDS SE+ED
Sbjct: 301 EYGVT-VGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360

Query: 361 VNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDI 420
           VNIQGHRV + SWTAESGVRKGGNLRT+PFR +ENS+D+R+TQYKQKDQPSLV NSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKP 480
           VNISVNVNTWKPPHYQDPG IPEL GQKFLQE ELQGT SAVQVTENGEPV +VNQ+K+P
Sbjct: 421 VNISVNVNTWKPPHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 ALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKV 540
           A  LQKEFQKPP+SANGQFA +RP+E+ADARTIFVSNVHFAATKD+LSRHFNKFGEVVKV
Sbjct: 481 AANLQKEFQKPPVSANGQFAASRPVEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 TIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 600
            IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT P
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNS 660
           RAVRGSPFPTPRFTR PFLRGVPGG RARPP+KLGARSMQWKRDSQTTTADNGA LSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660

Query: 661 VPSSGARSLTYVRTEPKPADK 679
           V SSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 680

[Close]

BLAST of ClCG10G012470 vs. NCBI nr
Match: KAG6581584.1 (Polyadenylate-binding protein 2-A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1149.0 bits (2971), Expect = 0.0e+00
Identity = 596/681 (87.52%), Postives = 632/681 (92.80%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS+DRVDDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSDDRVDDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSA--NEVPRPRSPVAEPDTINN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYV PPTKSSA  NEVPR +SPV EPD  NN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVEEPDIRNN 120

Query: 121 SHNLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNR 180
           S+NLESDSERGKSE+LSSR+ NREW GIAND+TRV PRSEVSRVK SSPEQVPSHRKR+R
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 ADDHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDT 240
            DDHQG EREAAFQVSIAAPRRLLQFAMRDAVATT+PS+  KE   KRLRSVVS SNSDT
Sbjct: 181 DDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVSVSNSDT 240

Query: 241 TNRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLA 300
           TNR RRL+SVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSCDMDLTE +GQ+A
Sbjct: 241 TNRPRRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTEFSGQIA 300

Query: 301 EYGVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESED 360
           EYGVTSV +DKYG +N T+DRPYSATYL RSNYSGKYAPNE MFEPET LASDS SE+ED
Sbjct: 301 EYGVTSVGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENED 360

Query: 361 VNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDI 420
           VNIQGHRV + SWTAESGVRKGGNLRT+PFR +ENS+D+R+TQYKQKDQPSLV NSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKP 480
           VNISVNVNTWKPPHYQDPG IPE+ GQKFLQE ELQGT SAVQVTENGEPV +VNQ+K+P
Sbjct: 421 VNISVNVNTWKPPHYQDPGQIPEVGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 ALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKV 540
           A  LQKEFQKPP+SANGQFA +RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEVVKV
Sbjct: 481 AANLQKEFQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 TIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 600
            IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT P
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNS 660
           RAVRGSPFPTPRFTR PFLRGVPGG RARPP+KLGARSMQWKRDSQTTTADNGA LSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNS 660

Query: 661 VPSSGARSLTYVRTEPKPADK 679
           V SSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 681

[Close]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-17
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 434 QDPGIPELAGQKFLQESELQGTRSAV-QVTENGEPV-TLVNQRKKPALTLQKEFQKPPLS 493
           ++PG  EL G + +++ EL+  ++ V ++ E  E +  L N+ +K     Q     PP +
Sbjct: 94  EEPG--ELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEK-----QMNMSPPPGN 153

Query: 494 ANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGS 553
           A           EADAR+I+V NV + AT + L  HF+  G V +VTI+ D  TG PKG 
Sbjct: 154 AGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGF 213

Query: 554 AYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVT--WPRA 600
           AY+EF  KES   +L+LD + F  R +KVV K  ++  G ST    +PRA
Sbjct: 214 AYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 255

[Close]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-17
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 434 QDPGIPELAGQKFLQESELQGTRSAV-QVTENGEPV-TLVNQRKKPALTLQKEFQKPPLS 493
           ++PG  EL G + +++ EL+  ++ V ++ E  E +  L N+ +K     Q     PP +
Sbjct: 93  EEPG--ELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEK-----QMNMSPPPGN 152

Query: 494 ANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGS 553
           A           EADAR+I+V NV + AT + L  HF+  G V +VTI+ D  TG PKG 
Sbjct: 153 AGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGF 212

Query: 554 AYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVT--WPRA 600
           AY+EF  KES   +L+LD + F  R +KVV K  ++  G ST    +PRA
Sbjct: 213 AYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 254

[Close]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-17
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 434 QDPGIPELAGQKFLQESELQGTRSAV-QVTENGEPV-TLVNQRKKPALTLQKEFQKPPLS 493
           ++PG  EL G + +++ EL+  ++ V ++ E  E +  L N+ +K     Q     PP +
Sbjct: 94  EEPG--ELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEK-----QMNMSPPPGN 153

Query: 494 ANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGS 553
           A           EADAR+I+V NV + AT + L  HF+  G V +VTI+ D  TG PKG 
Sbjct: 154 AGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGF 213

Query: 554 AYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVT--WPRA 600
           AY+EF  KES   +L+LD + F  R +KVV K  ++  G ST    +PRA
Sbjct: 214 AYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNR-PGISTTDRGFPRA 255

[Close]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 8.7e-16
Identity = 69/213 (32.39%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 434 QDPGIPEL-AGQKFLQESELQGTRSAV-QVTENGEPV-TLVNQRKKPALTLQKEFQKPPL 493
           ++PG+ E   G   +++ EL+  ++ V ++ E  E +  L N+ +K     Q     PP 
Sbjct: 96  EEPGLVEADPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEK-----QMNMSPPPG 155

Query: 494 SANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKG 553
           +A           EADAR+I+V NV + AT + L  HF+  G V +VTI+ D  +G PKG
Sbjct: 156 NAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 215

Query: 554 SAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVT--WPRAVRGSPFPTP 613
            AY+EF  KES   +L+LD + F  R +KV+ K  ++  G ST    +PR+   +     
Sbjct: 216 FAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRSRYRARTTNY 275

Query: 614 RFTRVPFLRGVPGGFRARPPMKL---GARSMQW 639
             +R  F      GF +RP  ++    AR+  W
Sbjct: 276 NSSRSRFY----SGFNSRPRGRIYRGRARATSW 298

[Close]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 1.1e-15
Identity = 70/213 (32.86%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 434 QDPGIPE-LAGQKFLQESELQGTRSAV-QVTENGEPV-TLVNQRKKPALTLQKEFQKPPL 493
           ++PG+ E   G   +++ EL+  ++ V ++ E  E +  L N+ +K     Q     PP 
Sbjct: 100 EEPGLVEGDPGDGAIEDPELEAIKARVREMEEEAEKLKELQNEVEK-----QMNMSPPPG 159

Query: 494 SANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKG 553
           +A           EADAR+I+V NV + AT + L  HF+  G V +VTI+ D  +G PKG
Sbjct: 160 NAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG 219

Query: 554 SAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVT--WPRAVRGSPFPTP 613
            AY+EF  KES   +L+LD + F  R +KV+ K  ++  G ST    +PRA   +     
Sbjct: 220 FAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNR-PGISTTDRGFPRARYRARTTNY 279

Query: 614 RFTRVPFLRGVPGGFRARPPMKL---GARSMQW 639
             +R  F      GF +RP  ++    AR+  W
Sbjct: 280 NSSRSRFY----SGFNSRPRGRVYRGRARATSW 302

[Close]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 615/679 (90.57%), Postives = 646/679 (95.14%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PP KSSANEVPRP+SPVAEPDT NNSH
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGK+EKLSSRRRNREW GIAN++TRV+P+SEVSRVK SSPEQVP+HRKR+R D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           D QG EREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEPHSKRLRSVVSASNSDTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
           R RRL+SVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQS DMDLTES+G+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           GVTSVEND+YG++NH+EDRPYSATYLERSNY GKY+ +E MFEPETGLASDS SE+EDVN
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           I+GHRVF+ SWTAESGVRKG NLRT+ FR ++NSDD+RV QY QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQD G IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK PA 
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQKEFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV I
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPT RFTRVPF+RGVPGGFRARPPMKLGARSMQWKRD+QT TADNGA LSGNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKPADK 679
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL
Match: A0A1S3CFE4 (nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 615/679 (90.57%), Postives = 646/679 (95.14%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PP KSSANEVPRP+SPVAEPDT NNSH
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGK+EKLSSRRRNREW GIAN++TRV+P+SEVSRVK SSPEQVP+HRKR+R D
Sbjct: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           D QG EREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEPHSKRLRSVVSASNSDTTN
Sbjct: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
           R RRL+SVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQS DMDLTES+G+L EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           GVTSVEND+YG++NH+EDRPYSATYLERSNY GKY+ +E MFEPETGLASDS SE+EDVN
Sbjct: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           I+GHRVF+ SWTAESGVRKG NLRT+ FR ++NSDD+RV QY QKDQPSL ANSSRDIVN
Sbjct: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQD G IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK PA 
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQKEFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV I
Sbjct: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 605

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPT RFTRVPF+RGVPGGFRARPPMKLGARSMQWKRD+QT TADNGA LSGNS+P
Sbjct: 606 VRGSPFPTSRFTRVPFMRGVPGGFRARPPMKLGARSMQWKRDNQTATADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKPADK 679
           S GARSLTYVRTEPKPADK
Sbjct: 666 SPGARSLTYVRTEPKPADK 683

[Close]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL
Match: A0A0A0L9I7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1)

HSP 1 Score: 1178.3 bits (3047), Expect = 0.0e+00
Identity = 607/679 (89.40%), Postives = 638/679 (93.96%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 6   MGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYV PP K+SANEVP  +SPVAEPDT NNSH
Sbjct: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDTRNNSH 125

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
           NLESDSERGK+EKLSSRRR REW GIAN++TRVVPRSEVSRVK SSPEQVP HRKR+R D
Sbjct: 126 NLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRKRSRPD 185

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTN 240
           DHQG EREAAFQVSIAAPRRLLQFAMRDAVATTRPS+A+KEPHSKRLRSVVSASNSDTTN
Sbjct: 186 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASNSDTTN 245

Query: 241 RSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEY 300
           R RRL+SVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQS DMDLTES+G+ +EY
Sbjct: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRPSEY 305

Query: 301 GVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVN 360
           G T VEND+YG++NH+EDRPYSATYLER NY GKY+ +E MFEPETGLASDSTSE+EDVN
Sbjct: 306 GATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSENEDVN 365

Query: 361 IQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVN 420
           IQGHRVF+ SWTAESGVRKG NLRT+ FR +ENSDD+RV QY QKDQPSL ANSSRDIVN
Sbjct: 366 IQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSSRDIVN 425

Query: 421 ISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPAL 480
           ISVNVNTWKPPHYQD G IPELAGQKFLQESELQGTRSAVQV ENGEPVTLVNQRK PA 
Sbjct: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQRKTPAS 485

Query: 481 TLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTI 540
            LQ+EFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KV I
Sbjct: 486 NLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545

Query: 541 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRA 600
           VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTV WPRA
Sbjct: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVIWPRA 605

Query: 601 VRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVP 660
           VRGSPFPT RFTR PF+RGVPGGFRARPPMKL ARSMQWKRD+QTTTADNGA LSGNS+P
Sbjct: 606 VRGSPFPTSRFTRAPFMRGVPGGFRARPPMKLRARSMQWKRDNQTTTADNGASLSGNSIP 665

Query: 661 SSGARSLTYVRTEPKPADK 679
           S GARSLTYVRTEPKP DK
Sbjct: 666 SPGARSLTYVRTEPKPVDK 684

[Close]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL
Match: A0A6J1J1N4 (nucleolin 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481904 PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 591/681 (86.78%), Postives = 626/681 (91.92%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGSEDRVDDRTFKVDF+GEGM KLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE
Sbjct: 1   MGSEDRVDDRTFKVDFSGEGMTKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSA--NEVPRPRSPVAEPDTINN 120
           AQNELNVFLAD+S SFVSWLWDHLAS +DLYV PPTKSSA  NEVPRP+SPV EPD  NN
Sbjct: 61  AQNELNVFLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRPKSPVEEPDIRNN 120

Query: 121 SHNLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNR 180
           S+NLESDSERGKSE+LSSR+ NREW  IAND+TRV PRSEVSRVK SSPEQVPSHRKR+R
Sbjct: 121 SNNLESDSERGKSEQLSSRQHNREWKEIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSR 180

Query: 181 ADDHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDT 240
           ADDHQG EREAAFQVSIAAPRRLLQFAMRDAVAT +PS+  KE   KRLRSVVS SNSDT
Sbjct: 181 ADDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATMKPSNEDKETLPKRLRSVVSISNSDT 240

Query: 241 TNRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLA 300
           TNR RRL+SVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSCDMDLTES+GQ+A
Sbjct: 241 TNRPRRLQSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIA 300

Query: 301 EYGVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESED 360
           EYG TSV +DKYG +N T+DRPYSATYL RSNYSGKYAPNE MFEPETGLASDS SE+ED
Sbjct: 301 EYGATSVGDDKYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETGLASDSISENED 360

Query: 361 VNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDI 420
           VNIQGHRV + SWTAESGVRKGGNLRT+PFR +ENS+D+R+TQYKQKDQPSLV NSSRDI
Sbjct: 361 VNIQGHRVLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDI 420

Query: 421 VNISVNVNTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKP 480
           VNISVNVNTWKP HYQDPG IPEL GQKFLQE ELQGT SAVQVTENGEPV +VNQ+K+P
Sbjct: 421 VNISVNVNTWKPTHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEPVNIVNQQKRP 480

Query: 481 ALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKV 540
              LQKEFQKPP+SANGQ A +RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEVVKV
Sbjct: 481 TANLQKEFQKPPVSANGQIAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKV 540

Query: 541 TIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWP 600
            IVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILK+VRKN SQL+GAS VT P
Sbjct: 541 IIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKIVRKNTSQLDGASIVTRP 600

Query: 601 RAVRGSPFPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNS 660
           RAVRGSPFPTPRFTR PFLRGVPGG  ARPP+KLGARSMQWKRDSQ TTADNGA LSGNS
Sbjct: 601 RAVRGSPFPTPRFTRGPFLRGVPGGLGARPPLKLGARSMQWKRDSQNTTADNGASLSGNS 660

Query: 661 VPSSGARSLTYVRTEPKPADK 679
           V SSGARSLTYVRTEPKPADK
Sbjct: 661 VLSSGARSLTYVRTEPKPADK 681

[Close]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL
Match: A0A6J1F4S1 (nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442109 PE=4 SV=1)

HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 591/674 (87.69%), Postives = 626/674 (92.88%), Query Frame = 0


Query: 8   DDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 67
           DDRTFKVDF+GEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV
Sbjct: 4   DDRTFKVDFSGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELNV 63

Query: 68  FLADDSHSFVSWLWDHLASSMDLYVAPPTKSSA--NEVPRPRSPVAEPDTINNSHNLESD 127
           FLAD+S SFVSWLWDHLAS +DLYV PPTKSSA  NEVPR +SPV EPD  NNS+NLESD
Sbjct: 64  FLADESRSFVSWLWDHLASCLDLYVEPPTKSSANDNEVPRAKSPVVEPDIRNNSNNLESD 123

Query: 128 SERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRADDHQGI 187
           SERGKSE+LSSR+ NREW GIAND+TRV PRSEVSRVK SSPEQVPSHRKR+RADDHQG 
Sbjct: 124 SERGKSEQLSSRQHNREWKGIANDETRVAPRSEVSRVKHSSPEQVPSHRKRSRADDHQGT 183

Query: 188 EREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTTNRSRRL 247
           EREAAFQVSIAAPRRLLQFAMRDAVATT+PS+  KE   KRLRSVVS SNSDTTNR RRL
Sbjct: 184 EREAAFQVSIAAPRRLLQFAMRDAVATTKPSNEDKETLPKRLRSVVSVSNSDTTNRPRRL 243

Query: 248 ESVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSCDMDLTESTGQLAEYGVTSV 307
           +SVAKVPNPMATVIKAVTEAAEDV+RVKSSSVFDRLGRQSCDMDLTES+GQ+AEYGVTSV
Sbjct: 244 QSVAKVPNPMATVIKAVTEAAEDVIRVKSSSVFDRLGRQSCDMDLTESSGQIAEYGVTSV 303

Query: 308 ENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESEDVNIQGHR 367
            +D+YG +N T+DRPYSATYL RSNYSGKYAPNE MFEPET LASDS SE+EDVNIQGHR
Sbjct: 304 GDDEYGELNRTQDRPYSATYLGRSNYSGKYAPNEGMFEPETRLASDSISENEDVNIQGHR 363

Query: 368 VFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRDIVNISVNV 427
           V + SWTAESGVRKGGNLRT+PFR +ENS+D+R+TQYKQKDQPSLV NSSRDIVNISVNV
Sbjct: 364 VLDDSWTAESGVRKGGNLRTVPFRDVENSEDERMTQYKQKDQPSLVTNSSRDIVNISVNV 423

Query: 428 NTWKPPHYQDPG-IPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKKPALTLQKE 487
           NTWKPPHYQDPG IPEL GQKFLQE ELQGT SAVQVTENGE V +VNQ+K+PA  LQKE
Sbjct: 424 NTWKPPHYQDPGQIPELGGQKFLQEGELQGTGSAVQVTENGEAVNIVNQQKRPAANLQKE 483

Query: 488 FQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDAT 547
           FQKPP+SANGQFA +RPLE+ADARTIFVSNVHFAATKD+LSRHFNKFGEVVKV IVTDAT
Sbjct: 484 FQKPPVSANGQFAASRPLEDADARTIFVSNVHFAATKDTLSRHFNKFGEVVKVIIVTDAT 543

Query: 548 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSP 607
           TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKN+SQLEGAS VT PRAVRGSP
Sbjct: 544 TGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKNSSQLEGASIVTRPRAVRGSP 603

Query: 608 FPTPRFTRVPFLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFLSGNSVPSSGAR 667
           FPTPRFTR PFLRGVPGG RARPP+KLGARSMQWKRDSQTTTADNGA LSGNSV SSGAR
Sbjct: 604 FPTPRFTRGPFLRGVPGGLRARPPLKLGARSMQWKRDSQTTTADNGASLSGNSVLSSGAR 663

Query: 668 SLTYVRTEPKPADK 679
           SLTYVRTEPKPADK
Sbjct: 664 SLTYVRTEPKPADK 677

[Close]

BLAST of ClCG10G012470 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 424.1 bits (1089), Expect = 2.1e-118
Identity = 302/681 (44.35%), Postives = 402/681 (59.03%), Query Frame = 0


Query: 1   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60
           MGS D VDDRTF  DF+ EG+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPVAEPDTINNSH 120
           A NEL +FL DDS SFV+WLWDHLA S+D Y      SS  E    +S +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 121 NLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRAD 180
            L+S+ ++G+S+K +  RR R+W        R  P + VS +      +  S RKR+R D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQW--------RSQP-TNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 181 DHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSAS--NSDT 240
           D +  +REA   VS    RRLLQFA+RDA+A +RP++++ E   KRLRSVVS S  NS  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 241 TNRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSS-SVFDRLGRQSCDMDLTESTGQL 300
            + +R++ SVA+V NPMATV+KAV EAAED  + KS  SVFDR+   +     +E+  Q 
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTG----SETLDQN 300

Query: 301 AEYGVTSVENDKYGNINHTEDRPYSATYLERSNYSGKYAPNEAMFEPETGLASDSTSESE 360
              G  S ++++  N +  ++      Y +    +G Y  N  M   +TGL  D +S+  
Sbjct: 301 MVLGEVSPKDEESRNFSQGQE-AVQLQYTQSLANNGVYFEN--MTTNDTGLNPDFSSDRG 360

Query: 361 DVNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQPSLVANSSRD 420
            +        N S  +     +  N  +L  R +++S   + T Y Q   P +   +   
Sbjct: 361 RLGSS----VNVSHPSTYLGNRINNPNSLQHRLVDDSKRVKGTNY-QNRLPEVA--TKHK 420

Query: 421 IVNISVNVNTWKPPHYQDP-GIPELAGQKFLQESELQGTRSAVQV-TENGEPVTLVNQRK 480
             + S N++T K    ++   IP++  Q+++ E  L  + +  Q+ T+     T+ N   
Sbjct: 421 TASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIGNGNV 480

Query: 481 KPALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVV 540
           KPA ++ KE      S  G  + TRPLE+A +RTIFV+NVHF ATKDSLSRHFNKFGEV+
Sbjct: 481 KPAASV-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVL 540

Query: 541 KVTIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVR-KNASQLEGASTV 600
           K  IVTD  TGQP GSAY+EF RKE+AENALSLDGTSFMSRILK+V+  N    E AS++
Sbjct: 541 KAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEAASSM 600

Query: 601 TWPRAVRGSPFPTPRFTRVP-FLRGVPGGFRARPPMKLGARSMQWKRDSQTTTADNGAFL 660
           +W R          RFTR P + RG  G  R R  ++ G RSMQWKRDS    AD G   
Sbjct: 601 SWSRG--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRDS----ADTG--- 631

Query: 661 SGNSVPSSGARSLTYVRTEPK 675
           + N+V  + ARSLTYVR E K
Sbjct: 661 NNNNVAPNNARSLTYVRAESK 631

[Close]

BLAST of ClCG10G012470 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-18
Identity = 149/595 (25.04%), Postives = 245/595 (41.18%), Query Frame = 0


Query: 7   VDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEEAQNELN 66
           VD  TF +    E  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 67  VFLADDSHSFVSWLWDHLASSMDLYVAPPTKSSANEVPRPRSPV--AEPDT-----INNS 126
            FL + S  FV  LW+ L             S +N    P++ V     DT     +++ 
Sbjct: 65  AFLKEQSWKFVVCLWELLVKYF---------SQSNSASGPKTDVDFGSNDTLIKQGLSSR 124

Query: 127 HNLESDSERGKSEKLSSRRRNREWGGIANDKTRVVPRSEVSRVKRSSPEQVPSHRKRNRA 186
              + D +        + +       I + +  V P+ E  ++ R      P  R R R 
Sbjct: 125 KYDDYDCKAADGTNSMNEQLISVTAPIDDIEAPVSPKVEKMKMSRQELIDSPCTRARRRK 184

Query: 187 DDHQGIEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSASNSDTT 246
            ++           S    R++L+  +  A       + AK   S   RS         T
Sbjct: 185 KENWN---------SSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS--------RT 244

Query: 247 NRSRRLESVAKVPNPMATVIKAVTEAAEDVVRVKSS----SVFDRLGRQSCDMDLTESTG 306
            + R      ++ +  A   +AV+    D    + +    SV+DRLGR S +  L   + 
Sbjct: 245 LKKRPYSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVLDTESR 304

Query: 307 QLAEYGVTSVENDKYGNINHTEDRPYSATYLE---RSNYSGKYAPNEAMFEPETGLASDS 366
            L+++G+ + E   +          YS  + E   R   +  Y      F+ +    S++
Sbjct: 305 TLSKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKDRKPKSET 364

Query: 367 TSESEDVNIQGHRVFNQSWTAESGVRKGGNLRTLPFRTIENSDDDRVTQYKQKDQ----P 426
            + +E      H  +N S       RK    R     +  + +   V QYKQ +Q    P
Sbjct: 365 ITSTEP-----HIAYNLS-------RK----RRYGMVSPNSGEFSYVPQYKQAEQDFEKP 424

Query: 427 SLVANSS--RDIVNISVNVNTWKPPHYQDPGIPELAGQKFLQESELQGTRSAVQVTENGE 486
           SL+++ S  +DI +   NV                  ++ +QE EL+  +S         
Sbjct: 425 SLLSHQSTKQDIFSEIKNV------------------KEKMQELELRIIQS--------- 484

Query: 487 PVTLVNQRKKPALTLQKEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSR 546
                 Q KK  +   +E +  P S   Q+      + +++R I V+NV++AA K+++S 
Sbjct: 485 -----KQLKKQKV---EERKPSPQSGESQYQE----DVSESRVIHVTNVYYAAKKEAISM 517

Query: 547 HF-NKFGEVVKVTIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV 581
            F +K G V  V +VTD  T  PKG+A+V F  KES   A++L GT F SR +KV
Sbjct: 545 FFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYSRPIKV 517

[Close]

BLAST of ClCG10G012470 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-13
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 503 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGSAYVEFMRKESA 562
           EE DAR++FV NV +A T + + +HF   G V +VTI+TD   GQPKG AYVEF+  E+ 
Sbjct: 87  EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTD-KFGQPKGFAYVEFVEVEAV 146

Query: 563 ENALSLDGTSFMSRILKVVRKNASQLEGASTVTWPRAVRGSPFPTPRFTRVPFLRGV--- 622
           + AL L+ +    R LKV++K  + + G       R  R +P+   RF R PF+      
Sbjct: 147 QEALQLNESELHGRQLKVLQKR-TNVPGLKQF---RGRRFNPYMGYRFRR-PFMSPYMYS 206

Query: 623 PGGFRARPPMKLGARSMQWK 640
           P G+   P  +   R M ++
Sbjct: 207 PYGYGKAPRFRRPMRYMPYQ 220

[Close]

BLAST of ClCG10G012470 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12
Identity = 48/123 (39.02%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 503 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGSAYVEFMRKESA 562
           EE D+R+I+V NV +A T + + +HF   G V +VTI+TD   GQPKG AYVEF+  E+ 
Sbjct: 98  EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEVEAV 157

Query: 563 ENALSLDGTSFMSRILKVVRKNAS-----QLEGASTVTWPRAVRGSPFPTPRFTRVPFLR 621
           +N+L L+ +    R +KV  K  +     Q  G          RG PF   R     F+ 
Sbjct: 158 QNSLILNESELHGRQIKVSAKRTNVPGMRQFRG----------RGRPFRPMR----GFMP 205

[Close]

BLAST of ClCG10G012470 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12
Identity = 48/123 (39.02%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 503 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVTIVTDATTGQPKGSAYVEFMRKESA 562
           EE D+R+I+V NV +A T + + +HF   G V +VTI+TD   GQPKG AYVEF+  E+ 
Sbjct: 136 EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFAYVEFVEVEAV 195

Query: 563 ENALSLDGTSFMSRILKVVRKNAS-----QLEGASTVTWPRAVRGSPFPTPRFTRVPFLR 621
           +N+L L+ +    R +KV  K  +     Q  G          RG PF   R     F+ 
Sbjct: 196 QNSLILNESELHGRQIKVSAKRTNVPGMRQFRG----------RGRPFRPMR----GFMP 243

The following BLAST results are available for this feature:

BLAST of ClCG10G012470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904558.1	0.0e+00	92.78	nucleolin 1 isoform X1 [Benincasa hispida]	[more]
XP_008461790.1	0.0e+00	90.57	PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isofo...	[more]
XP_011651783.1	0.0e+00	89.40	nucleolin 1 isoform X1 [Cucumis sativus]	[more]
XP_023528108.1	0.0e+00	87.81	nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6581584.1	0.0e+00	87.52	Polyadenylate-binding protein 2-A, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG10G012470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DDY9	1.2e-17	37.65	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	1.2e-17	37.65	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q6NVP7	1.6e-17	37.65	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]
Q8CCS6	8.7e-16	32.39	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]
Q86U42	1.1e-15	32.86	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]

BLAST of ClCG10G012470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3W4	0.0e+00	90.57	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CFE4	0.0e+00	90.57	nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1	[more]
A0A0A0L9I7	0.0e+00	89.40	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV...	[more]
A0A6J1J1N4	0.0e+00	86.78	nucleolin 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481904 PE=4 SV=...	[more]
A0A6J1F4S1	0.0e+00	87.69	nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442109 PE=4 S...	[more]

BLAST of ClCG10G012470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	2.1e-118	44.35	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	4.3e-18	25.04	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	1.1e-13	37.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.1	2.7e-12	39.02	polyadenylate-binding protein 1	[more]
AT5G51120.2	2.7e-12	39.02	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 509..581 e-value: 1.1E-21 score: 88.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 510..578 e-value: 2.2E-18 score: 65.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 508..585 score: 17.47229
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 9..91 e-value: 3.2E-10 score: 41.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 626..678
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 637..667
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..244
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 5..674
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 454..589 e-value: 7.4E-25 score: 89.7
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 24..87 e-value: 2.4E-7 score: 30.9
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 5..674
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 502..582

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G012470.2	ClCG10G012470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding