ClCG10G012440 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G012440
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	arabinogalactan peptide 23-like
Location	CG_Chr10: 26437008 .. 26443975 (+)
RNA-Seq Expression	ClCG10G012440
Synteny	ClCG10G012440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGTTGGATGCAAAGCTAGAGGTCCTTATAGGATCCTTGCAAACACTCACAAAATAAAATTTACTTAACGAATGATTCCAACCAAAAGCTTAGTTAGAAAAATTAATAAACCCTTAGATTGAACTTAGAACCTATTATTGTCACTCTTAAATCCTAAGTCAACTCACTCCATAATTAGCTTGATCAAAACTAATCTAATTAATTAATTTAAACAACAAATTTAAAGCAAGATTTGAAAAAAAAGACAACACCAAAGGGGTTGAATAAACACAAATTTTCTAATACTAATAATACGAGCTTTGAACAACATTACAATATATTTTAAAGACCAAAAGGTTGTGCATGAGACAAAAAAACTCAAAAGTCATTCAAACATAATTAATTGCAAATTGTAGAAAATAAAACCTAGGAAATTAAAAACTTAATTGCATACTAATTAATAAGTCAAAATGCAAAACTAAAAGTGTAGAAAGTCTTCAAATTGTCTTAAATAACTTATATAAAAGGTGGTAAACTTGATTTGTACGTTTGACATCACAATTTTTCATATTGTGCACACTTGACATCATTTTCTTCACAAAATGCACATTCTACCACCATGTCATCTCCCAAACTATAAGTTTTTTTGTTCCATCTTCACTTTATTCTCTTTTGAACTCATTAGACTAACATTATATATAAAGTTTGACTCAAAATTATCTGTTTATTCTTGTAAATTTACTAGCTTCTGAAGATATAGTGTGAATACCTCTTGAATCTTTTTTGCTTTGCTTATTGTAATTGCTCTTTCGAGTACATGCAATGGCTCTAATATTGAATTCACATTAATACAGACTATTTATGAAATTTTATCAACCTATAGGGACCAAATTCTAATTTCTAAAACCATAAAGCATAGAAACTAAATTCTAACTTTCTTAGAATCATATGATCAAATTTGCAATGGCTTTAATGTTGAATTCACATTAATACAAACTATTTATGAGATTTTATCAACCTGTAAGGACCAGATTCTAATTTTTAAAACCATAAAGCATAGAAACTAAATTCTAACTTTCTTTCAATCATAGGATCAAATTTGCAACTAAAAAAAAAAAAATACCTTTTTAGTCCCCAAGTTTTGAACAACTTGTACGTTTGGTCCATAAATTTTAAAAATGTACACTTTTAGTCTCCAAGTTTATAATAATATGTTTATTTGGTCTCTATGTTTTCATAATGTAACTTTTTAGTCTATGAGTTTTTAAAAATAAAATTAAAAGGTCCCTCAAACAAGTTATTATTATTATTTTAAATAATCTATGCCATTTTAAATTAGAAAAATAATTTTTAAAAATGATTTCCTCTCTAAAATTATTTTTTTAAATTTTAAATATTATATAATTATTTTTAAAAATATAAAAAAATACTTAAAAGTCTTTTTAAATCTATTTTAAAAAACTGAATAACTGAAAATATATATTTTGAAAACTCACCAACAAAATGGAGCTGTTATAATAAACTTGAAACTAAAAATGTTGATTTTTAAAATTGAGGGACTAAATCACGTATTATCCAAAACTTTTGAACTAAAAAATGTAATTTTAAAAATAAAATTAAAATTGAGCGTCCAGAAAAATTTCTCAGTGGAGCCCACCTAGCCGGTCTCTCTACCAGTCTTCCATTTCCATTTGCATCGACTCCATTCTCCAAACTTCCAGACCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTCTTCATCTCTCCAAATTGTAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCAAAATCTTCCTCCAGTCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGGTAGATGATTTTATTTTTCTTTTTCTTTCCAAGATTTCCAACTTCGAGACTCCCATCTATCTGTATATATTCTTTGATTTTCTCCTTTGTTCCATAAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATGTAACATGTTAGAGGATGTGTTCTCAGTTAATTTTAGAAAAATAAAGAGATGATGTTCATGTTAACATGTGTACTGTGATGTTCTGTTTCTTTCCTTCCATTCAATTTGAGGATTTCGCAATTTGTTTTTCTGAATCCTGGGAGTGAAATTGTTTCTCTGGTCCTGGCTTCTCACACTTGCTATAGCTAGTAATTTGATGTTAACTTGATTGATTTATAGTTGGTGAATTGATTGCAAGCCTAAAATGACAGCTCTAGATACATAATTTTAGATACATGTATTCCTATTCATTGTATTTGATAGGGTTGAAGAAGAGCATCATTTTCAAATGTATAATTGTGTGTGTAATGTCTTCATTCTAAGATTTTAGGCATCTGAATAATAGGGTTATTCGATGCTTGTGAGTGTAAGATTATGGTTTCTATTACATAGCAACTGCAGGATTGATTCTTATGAAGTTGATTGGGAATATCAGATTGTTGTGTTTCTTTTAGGCCCAGATTCGCTTTTGGTTTTTCAAAATGAAGCTTTACTACTCCCTTTTTTTTTTTTGTCTTTTCTTTCCTTTTTTTGTCTGTTTTTTAGAGGTGTTTTCAAAATGCCAAATTTTGATAACTAAAATGTAGTTTTTAAAAGTGTATTTTTGCTTTTGGAATTTTACTGTGAATTCAAATATTCCTTAATAAAGATAAAAACTACCATAATGAAATGGTGGGAAGACAACACAATTTTCTAAAATCAAAATAGTTATTGAACGGGGTTGTAGTTTTTGTTTTAGTTTTCTTACCAAGCTTTAGGGTTAGAATTGGAAGAGGAAGACAACAAGAATTCTAAAACTTCTGAGTTTCCAGTTTGAACTAGGACTTTAGAGGGTATTTTCCGAACAACCCAAGCCTTTATTACTAAGATCTTTGTCACTAAAATGTAACAAAATCCATACTCCATTCCAATACTGCCTCTGTTAGTTTATTGTTGAATTATTCTATACATGATCAGCTCTTTACAACACAGTTTTCTTTTTCAGAAGTTCAACACTTGTAGAATGAAACTCAAACCATCAAACTTTGAGATGGTAATCGGTGTCTTATCTACCGAGTTATGTTCAAATTGACCTTTACAACATAGACGGACCTTATAGGCTAATTATATCATACAAATTCATGTATGTTAGATAAAATTGCTTGTTTTGGTCTGTTGGAGGATCTCCTTAGAGTAGTAAAGTGCAAGTATATACATACATTTATATATATATCATTGTTATGAAAATGAAATTGGAAATTTGAGGAAGAATGAGGGTGTAGAAGATGATGAGATTAATTTTTGATGCATGGTTGTCTAAGATGTTTGAACATCTTTATCTGATGCAAAAGGAGTATTACCATACACCTGCATATCCATCATTATTTATGATACATGACTTCCTCAAAAGAAACCGTTGGCATATAACTAGGTCTTGTTTGATGGTTATTTGGTTTTTTATTTTTAATTTTTGAAAATTAAGTTTGTGAGCACTATTTCTACCATTGTTTCTATATTTTTGTAATTTACTTTCTACTTATGTTTTGCGAAATCAAATTAAGTCTTGAAACTAACCAAAAAAAAAGAAAAAAAGACTAGAAATGCAAGTGTTTATTTAATGGAGGTGAAAACTATAATTGAGAAATTAGAAGTAAATAAGCATACATAGCAAAAATAGAAAATTGAAAACAAATTGGGACCAAAGACAATGTATGTTTTTAAAGTATTGGTCTATTGGATATGCTCAAGATTAAGATGAGTTCTTGTTTGCTAGCAAACATTGGGTGGTTACCCAGAATCTAGAACATTAGAAAACAAGGTGGTATAGCAATTGTTCTTGTGATTCAGGGAATTTTTGGCTCTTTGTTTTACTTTCAATGTATTAAGCTGATTGGAGTCTCGCAAGAATACAGCCAAAAATACGTTGTTTATCCTGAAGAAGGTTACAATTTCATTACAAATTTGGTCACAATAATTCAAAAATTTTCAAATTAGTTACCCAATGCCAATATGCCTGAATTCCATTGTTCGGTTTCAAAAACTTTTGCTTTTTATACCAGAGAGTTGAGGAGATTCAAATTACATGTCTTTTATTTGCTTAAATAGAAGTTTTTTTGTGAAATGTTTTTGTTTGTATGGTTGAAGTTTGGCTATTTCACAGGAACTAAACTGAAACTAATATAAATCATAAAGAAATGATTGAAAGTTTTAAAACGGTAAGAATTAAGACAATATTCACTCCGGTGAAAACATAATAATCAATGGTAATGTGGAAAATGGGCCTTATTTGATTACCTTTGGTGTTTTGCATTCGTATTGTACTTACATATGGGGTCCATTTCAAAATTTGTAATAAAAAGATGCAAATTAATTGACGAGTGGAGAACGCTCAATCTAATTGTGTTTGAAAATTAAGTTGTTTTGTTACCATTATCGTTATTGGTACCATTGCTGCTGGTGTTTCAAAAGAAAAATTATGGATTTTGATATTTTTGATATTATCATTATTGTTAACTTTACCTTTGAGGCCCAAGTGGTAACAACAACAACAATAAATGTCAATAAATGTGACAACTGATAATTTTAAGTAAACGTAGTTAAAAGCAAATGCAATCACATTTGCAATTCCAACTTATTACAATTGATTTAGCAATAGAATTCTAATACAAAAATTTCATTATTGTTTGGTAAACGTAGCCTAAATTGTTATTAGAATCATTGATATCGAATTTGTAATTTATTTAATCAAATTAAAAAGCAAAAAGAAAGTAAAGGAAGATGCTATGTTTTCTTTTCTCTCTTGGGTTCTTTAGGTAGGAGTTTCGAAACTCGAACTTAAGATTATTTATATATTTTATGTCAATTGAAATTGAATTATGTAGTAGAATAAACATTACTCTTACACTCAAATAAAATCAAGATAAAAGATTGCTTCAGTAAATAATAATGATATTATTATTATTATTATTATTATTATTATTATTATTATGTTTAGAACATAACTGCTCCAGCCAAGTAGATATATGTCCACCATGTGTCAATTAAGATTTGATAAGTTATTCATTATGGCATCATGGCCTCGAGAGCTTTGCCTCTATCCAATTCACACCTTCAAAAGAAAGTCATTGAACTGATTTTAGAGCTGGATTCCATATCAAGTGATGGTTTGTATTGTTGGTCACATTTTTCCATTGTTACATTCTTTTTTCTTTTATCGGGAGTGTGCAGCTCTACGACTCTCGTGTAATTGATCCTACTACGTTTGGTTGTAAAAAAAATTATTAAGATATTTAAGAGTTTGATTGGTAGAGAATTTGAAAATAGAAATTTGAAACACAATAAATTTAGTGAAAACATAGATGTATTTCTTGTTTTCATGTATGTGTTTGATGGCATATTTAGAAATTGAATTTTGATTTAAACCACCGTTTAGTAATACGTACTAAATATTAGTTTGATTATAAACTATTATTTATTGATTTATGAACTTGTTATTATTATTCTTATTGTATTTTATACTTTAAAATACATTACATAACATATCTTACATTTAGAAAAATCGATTGAGGTTGTAACATGAATACTATATTTTTAAACATTCTTATTTTTATTTATATAATTCTACCGTTTAAAATTTAAGGTCTAGATACACTAAAAATATAAAAATTTTGGATGATCTATCAGACACATATTTATTAAACTCGATAAATTAGAAAATATAAAACAAAATCTGAATTGTCAACAAAAACATGTTCTAAAACTCTCTTACATGGTAGCCATACCTACACTGGGTTAGACTCATTCTTTCTAAGCCCTATATTCCATTATCATATTATACATCCAACACTTGTTTGATCTACCTATTCAATTGAATATATGCATAATTGAACTCATTCATTAAATAAATATCTTGTTATATACACTGACTTCTAATATAGGTGCATACGAGCATATTAGAAAAGTTCTAGTACTGTAATAATATTGAAAAATTTTCATACTACTTTAGCTCATTGTTGGTAAAAAATTGACATTTAAAAATTATGTGATATCTTTAAAATAAAGAAAAATTATCTTAAATGATAAAACTGTTTAAAATATATCTTAAATTTTATAAATATTTTTATTACGTTGGCTATATTTGTAAATAACCCTAAAATAAATTAATATTAGTTTAACTAATCATTTATAATGAGATGCAAATAATTAAATATTAATAAAAGAAAAACGGCTTATCACGGAATGATGCAAACAGAGAAAGAAACGATCAAATTCAAACAAATTCCCAAAATAGAAAAAAAGCCCTAATTCCCAACCACGAATCGTCCTCTTCAATTTCCCTCCAAACCAGGAACTTTCTTCTAAATATAGCTCTGCAAATTCAACAAGTTACCTTCCACCGAAAATCGCTCCAGTTTTCACCTATAAATCACATTCATCCCATCTCATTTTCCTCAGGCAGCAATTTCCAAAGCGAAGGCGTTTTTCGGGGATCTTTCTCGTTCGATTCCACTCAACGAATAAACGCCACCTAATTCCAAAAAAAAAAACCTAAAAAATCGCAATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

mRNA sequence

ATGCTCGTTGGATGCAAAGCTAGAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCAAAATCTTCCTCCAGTCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

Coding sequence (CDS)

ATGCTCGTTGGATGCAAAGCTAGAGACAGAACCCCCAAAATCTACCGTCTTCAACCCTACAGCTTCAAAATCTTCCTCCAGTCCTTCGTCTCTGTTAACGATGTTGCAGTTCTTCTTCACCGTGGCTTTCTCTGCAGTACCTTTGACTCTCTACATTCCCCCGCTCCGGAGCTTCAATCTCTTCGTCGAGACCATGGAGGAGATACTTCGGGAGTCAAGAACTTACACCAATCGGGTGTATCCTCGAGCTCGGCATGTTTGGTTAAGGGTTTTGGATTGTATTCTTTGCAGCAGCAGATTTGCTTGAGTGTGATTCTGGTTGCCGATTCGGTTCTTGCGGGAGTCTGTTGTAAATTGCTGAATAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGATGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGCGCCGCCAGTGGTCTCCCGGCAATTGGCTCTCTCATCGGCGCCTCGTTGCTCTCCGTCGCCGCCTACTACTTGCAATGA

Protein sequence

MLVGCKARDRTPKIYRLQPYSFKIFLQSFVSVNDVAVLLHRGFLCSTFDSLHSPAPELQSLRRDHGGDTSGVKNLHQSGVSSSSACLVKGFGLYSLQQQICLSVILVADSVLAGVCCKLLNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ

Homology

[Close]

BLAST of ClCG10G012440 vs. NCBI nr
Match: XP_022983304.1 (arabinogalactan peptide 23-like [Cucurbita maxima])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSAIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. NCBI nr
Match: KAG7018086.1 (hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 114 GVCCKLLNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVA 173
           G   + + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS+IGASLLSVA
Sbjct: 42  GDSSRRMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVA 101

Query: 174 AYYLQ 179
           AYYLQ
Sbjct: 102 AYYLQ 106

[Close]

BLAST of ClCG10G012440 vs. NCBI nr
Match: XP_038905644.1 (arabinogalactan protein 23-like [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 4.9e-16
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSA VAHDEALAPAPGPSSGAA GLPAIGS+IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAAVAHDEALAPAPGPSSGAAIGLPAIGSVIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. NCBI nr
Match: XP_022998512.1 (arabinogalactan peptide 23-like [Cucurbita maxima])

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-15
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           +NKI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MNKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. NCBI nr
Match: KAG7019275.1 (Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-15
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KI CA+LFAAATVSAVVAHDEA APAPGP+SGA +GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MKKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATAGLPAIGSLIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 36/58 (62.07%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC VLFAAA+++AV+A +E  APAPGP+S A++ LPA+GSL+GASL+S+ +YYL
Sbjct: 3   MKKIACGVLFAAASMTAVMAAEEVGAPAPGPASAASAALPALGSLVGASLVSLFSYYL 60

[Close]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL
Match: A0A6J1J6Y9 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111481924 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.2e-17
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KIACAVLFAAATVSAVVAHDEALAPAPGPSSGAA+GLPAIGS IGASLLSVAAYYLQ
Sbjct: 3   MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSAIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL
Match: A0A6J1K873 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111493125 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.9e-16
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           +NKI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MNKITCAILFAAATVSAVVAHDEAAAPAPGPTSGATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL
Match: A0A5A7U280 (Arabinogalactan peptide 23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00270 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.4e-14
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGSL+GASLLS AAYYL
Sbjct: 3   MKKIACAILFAAATVSAAVAEDKALAPAPGPSSGAAIGLPAIGSLVGASLLSFAAYYL 60

[Close]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL
Match: A0A0A0L9U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697910 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGSL+GASLLS AAYYL
Sbjct: 3   MKKIACAVLFAAATVTAVVAADEALAPAPGPSSGAGIGVPAIGSLVGASLLSFAAYYL 60

[Close]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL
Match: A0A6J1HQG2 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111465151 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.5e-12
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYLQ 179
           + KI CAVLFAAATV+A VA +EA APAPGP+S A  GLPAIGSLIGASLLSVAAYYLQ
Sbjct: 3   MKKITCAVLFAAATVTAAVAQNEASAPAPGPTSAATVGLPAIGSLIGASLLSVAAYYLQ 61

[Close]

BLAST of ClCG10G012440 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 )

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-11
Identity = 36/58 (62.07%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC VLFAAA+++AV+A +E  APAPGP+S A++ LPA+GSL+GASL+S+ +YYL
Sbjct: 3   MKKIACGVLFAAASMTAVMAAEEVGAPAPGPASAASAALPALGSLVGASLVSLFSYYL 60

[Close]

BLAST of ClCG10G012440 vs. TAIR 10
Match: AT2G41905.1 (BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-08
Identity = 36/59 (61.02%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 120 LNKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAASGLPAIGSLIGASLLSVAAYYL 178
           + KIAC V+FAAA+++AV+A  E  APAPGP +SGA+  +PA+GSL+GASL+S+ AYYL
Sbjct: 3   MKKIACGVVFAAASMTAVMA-AEVGAPAPGPAASGASVAVPALGSLVGASLVSLFAYYL 60

The following BLAST results are available for this feature:

BLAST of ClCG10G012440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983304.1	1.3e-16	93.22	arabinogalactan peptide 23-like [Cucurbita maxima]	[more]
KAG7018086.1	1.3e-16	86.15	hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038905644.1	4.9e-16	91.53	arabinogalactan protein 23-like [Benincasa hispida]	[more]
XP_022998512.1	1.4e-15	88.14	arabinogalactan peptide 23-like [Cucurbita maxima]	[more]
KAG7019275.1	3.2e-15	86.44	Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG10G012440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S2W4	3.2e-10	62.07	Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2	[more]

BLAST of ClCG10G012440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6Y9	6.2e-17	93.22	arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111481924 PE=4...	[more]
A0A6J1K873	6.9e-16	88.14	arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111493125 PE=4...	[more]
A0A5A7U280	8.4e-14	84.48	Arabinogalactan peptide 23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0L9U8	1.9e-13	84.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G697910 PE=4 SV=1	[more]
A0A6J1HQG2	3.5e-12	79.66	arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111465151 PE=4...	[more]

BLAST of ClCG10G012440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57690.1	2.3e-11	62.07	arabinogalactan protein 23	[more]
AT2G41905.1	3.1e-08	61.02	BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34672:SF2	ARABINOGALACTAN PROTEIN 23	coord: 120..178
IPR044702	Arabinogalactan protein 23/40	PANTHER	PTHR34672	POLLEN-SPECIFIC ARABINOGALACTA PROTEIN BAN102	coord: 120..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G012440.2	ClCG10G012440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane